Os02g0525600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0525600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 206.79 | 0.676 | 10.2 | 1.49 | 2.79 | -2.05 | -0.912 | -0.796 | 0.832 | 15.4 | 82.84 | 1294 | -- | -- |
| 206.97 | 0.67 | 10.2 | 1.57 | 2.73 | -2.2 | -0.689 | -- | 0.837 | 15.5 | 82.52 | 1213 | -- | -- |
| 208.77 | 0.673 | 10.2 | 1.51 | 2.75 | -2.11 | -- | -0.355 | 0.83 | 15.5 | 82.38 | 1242 | -- | -- |
| 208.4 | 0.672 | 10.2 | 1.55 | 2.73 | -2.19 | -- | -- | 0.841 | 15.6 | 82.94 | 1198 | -- | -- |
| 588.25 | 1.13 | 10.1 | 1.34 | -- | -3.42 | -- | 0.457 | 0.92 | -- | 91.56 | 1171 | -- | -- |
| 309.73 | 0.825 | 10.2 | 1.24 | 3.07 | -- | -0.483 | -- | 0.896 | 15.2 | -- | -- | -- | -- |
| 310.48 | 0.825 | 10.2 | 1.23 | 3.07 | -- | -- | -- | 0.893 | 15.2 | -- | -- | -- | -- |
| 587.54 | 1.13 | 10.2 | 1.41 | -- | -3.39 | -- | -- | 0.86 | -- | 90 | 1170 | -- | -- |
| 265.72 | 0.759 | 10.2 | -- | 2.74 | -2.07 | -- | -- | 0.821 | 15.4 | 106.8 | 1264 | -- | -- |
| 846.07 | 1.36 | 10.2 | 1.1 | -- | -- | -- | -- | 0.813 | -- | -- | -- | -- | -- |
| 350.13 | 0.875 | 10.2 | -- | 3.05 | -- | -- | -- | 0.757 | 15.2 | -- | -- | -- | -- |
| 636.05 | 1.17 | 10.2 | -- | -- | -3.41 | -- | -- | 0.792 | -- | 125.7 | 1167 | -- | -- |
| 877.75 | 1.38 | 10.2 | -- | -- | -- | -- | -- | 0.691 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 199.27 | humidity | 80 | 720 | < th | dose dependent | rect. | 18 | 4 |
| 12 | 203.65 | humidity | 70 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 13 | 203.93 | humidity | 50 | 1440 | > th | dose dependent | rect. | 18 | 2 |
| 17 | 204.25 | humidity | 60 | 720 | > th | dose dependent | rect. | 17 | 6 |
| 29 | 205.39 | humidity | 80 | 1440 | < th | dose dependent | sin | 14 | NA |
| 57 | 206.49 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 17 |
| 60 | 206.59 | humidity | 70 | 1440 | > th | dose independent | sin | 13 | NA |
| 91 | 207.94 | humidity | 70 | 1440 | < th | dose independent | sin | 13 | NA |
| 96 | 208.07 | humidity | 50 | 1440 | > th | dose dependent | rect. | 10 | 13 |
| 114 | 208.50 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 11 |
| 116 | 208.56 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 8 |
| 123 | 208.63 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 4 |
| 136 | 208.80 | humidity | 50 | 1440 | > th | dose dependent | sin | 19 | NA |
| 169 | 209.16 | humidity | 50 | 1440 | > th | dose dependent | rect. | 13 | 9 |
| 211 | 209.93 | humidity | 90 | 1440 | < th | dose dependent | rect. | 10 | 13 |
| 290 | 210.97 | humidity | 90 | 1440 | < th | dose dependent | rect. | 6 | 17 |
| 324 | 211.43 | humidity | 80 | 720 | < th | dose independent | rect. | 18 | 3 |
| 385 | 211.74 | humidity | 70 | 1440 | < th | dose independent | rect. | 15 | 5 |
| 415 | 211.89 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 21 |
| 428 | 212.05 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 15 |
| 541 | 212.84 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 14 |
| 700 | 213.58 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 804 | 214.35 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 21 |
| 970 | 215.81 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 972 | 215.82 | humidity | 70 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 992 | 215.98 | humidity | 70 | 14400 | < th | dose independent | rect. | 17 | 5 |