Os02g0524800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0524800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 73.92 | 0.404 | 7.02 | 0.824 | 0.96 | -0.287 | 0.446 | 1 | -0.41 | 18.6 | 2.3 | 55 | -- | -- |
| 75.17 | 0.404 | 7 | 0.842 | 0.931 | -0.355 | 0.582 | -- | -0.394 | 18.6 | 3.766 | 53 | -- | -- |
| 74.36 | 0.402 | 7.03 | 0.816 | 0.968 | -0.287 | -- | 1.2 | -0.411 | 18.6 | 2.154 | 55 | -- | -- |
| 76.07 | 0.406 | 7 | 0.796 | 0.95 | -0.472 | -- | -- | -0.397 | 18.6 | 3.8 | 53 | -- | -- |
| 103.87 | 0.475 | 7.01 | 1.08 | -- | 0.862 | -- | 1.65 | -0.417 | -- | -1.929 | 333 | -- | -- |
| 77.75 | 0.413 | 7 | 0.905 | 0.853 | -- | 0.718 | -- | -0.383 | 18.9 | -- | -- | -- | -- |
| 79.02 | 0.416 | 7 | 0.891 | 0.855 | -- | -- | -- | -0.381 | 19 | -- | -- | -- | -- |
| 106.75 | 0.481 | 6.99 | 1.06 | -- | 0.839 | -- | -- | -0.413 | -- | -0.9867 | 424 | -- | -- |
| 91.38 | 0.445 | 7.03 | -- | 1.07 | -0.754 | -- | -- | -0.472 | 18.4 | 2.899 | 54 | -- | -- |
| 117.44 | 0.506 | 6.98 | 0.874 | -- | -- | -- | -- | -0.397 | -- | -- | -- | -- | -- |
| 99.93 | 0.468 | 7.02 | -- | 0.845 | -- | -- | -- | -0.481 | 19.1 | -- | -- | -- | -- |
| 132.69 | 0.536 | 7.01 | -- | -- | -0.898 | -- | -- | -0.521 | -- | 7.4 | 50 | -- | -- |
| 137.57 | 0.547 | 7 | -- | -- | -- | -- | -- | -0.494 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 72.14 | radiation | 1.0 | 10 | > th | dose independent | rect. | 11 | 19 |
| 3 | 72.23 | wind | 9.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 4 | 72.26 | radiation | 1.0 | 10 | > th | dose independent | rect. | 9 | 22 |
| 7 | 72.46 | humidity | 80.0 | 10 | < th | dose independent | rect. | 22 | 11 |
| 9 | 72.48 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 23 | 8 |
| 16 | 72.62 | radiation | 30.0 | 30 | > th | dose independent | rect. | 7 | 2 |
| 22 | 72.62 | humidity | 80.0 | 90 | < th | dose independent | rect. | 23 | 8 |
| 50 | 72.68 | wind | 5.0 | 270 | < th | dose independent | rect. | 21 | 12 |
| 52 | 72.73 | wind | 9.0 | 720 | < th | dose independent | rect. | 6 | 9 |
| 53 | 72.76 | wind | 5.0 | 720 | < th | dose independent | rect. | 21 | 4 |
| 54 | 72.80 | wind | 7.0 | 90 | < th | dose independent | rect. | 14 | 21 |
| 57 | 72.83 | wind | 9.0 | 90 | < th | dose dependent | rect. | 14 | 21 |
| 59 | 72.87 | wind | 9.0 | 720 | < th | dose independent | rect. | 3 | 15 |
| 94 | 72.91 | radiation | 30.0 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 128 | 72.95 | wind | 1.0 | 30 | > th | dose dependent | rect. | 9 | 15 |
| 129 | 72.98 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 21 | 4 |
| 131 | 72.99 | wind | 1.0 | 720 | > th | dose dependent | rect. | 8 | 5 |
| 132 | 73.00 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 138 | 73.03 | wind | 7.0 | 270 | < th | dose independent | sin | 8 | NA |
| 139 | 73.03 | wind | 7.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 141 | 73.04 | humidity | 80.0 | 720 | > th | dose independent | rect. | 21 | 4 |
| 143 | 73.04 | wind | 9.0 | 720 | < th | dose dependent | rect. | 21 | 4 |
| 145 | 73.05 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 7 | 2 |
| 147 | 73.06 | wind | 9.0 | 720 | < th | dose independent | rect. | 3 | 23 |
| 148 | 73.06 | wind | 1.0 | 270 | > th | dose dependent | rect. | 9 | 3 |
| 150 | 73.07 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 171 | 73.08 | wind | 3.0 | 270 | > th | dose dependent | rect. | 22 | 15 |
| 173 | 73.10 | wind | 3.0 | 270 | > th | dose independent | rect. | 9 | 3 |
| 176 | 73.10 | wind | 1.0 | 10 | > th | dose independent | rect. | 14 | 21 |
| 177 | 73.10 | wind | 3.0 | 270 | > th | dose dependent | sin | 5 | NA |
| 205 | 73.13 | wind | 1.0 | 30 | > th | dose dependent | rect. | 9 | 5 |
| 221 | 73.13 | wind | 1.0 | 30 | > th | dose dependent | rect. | 9 | 18 |
| 239 | 73.18 | wind | 1.0 | 30 | > th | dose dependent | rect. | 9 | 10 |
| 249 | 73.20 | wind | 1.0 | 270 | > th | dose dependent | rect. | 11 | 1 |
| 274 | 73.25 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 9 | 22 |
| 281 | 73.27 | atmosphere | 1000.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 290 | 73.29 | atmosphere | 1000.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 308 | 73.29 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 11 | 20 |
| 320 | 73.33 | temperature | 20.0 | 720 | > th | dose independent | rect. | 6 | 16 |
| 330 | 73.34 | wind | 5.0 | 270 | > th | dose independent | rect. | 22 | 15 |
| 335 | 73.34 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 22 | 13 |
| 344 | 73.36 | humidity | 70.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 468 | 73.36 | wind | 1.0 | 30 | > th | dose dependent | rect. | 9 | 22 |
| 478 | 73.38 | wind | 1.0 | 10 | > th | dose independent | rect. | 19 | 16 |
| 482 | 73.39 | wind | 5.0 | 270 | > th | dose independent | sin | 5 | NA |
| 500 | 73.41 | temperature | 20.0 | 720 | > th | dose independent | sin | 21 | NA |
| 501 | 73.41 | wind | 5.0 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 502 | 73.41 | wind | 5.0 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 505 | 73.41 | wind | 5.0 | 270 | > th | dose independent | rect. | 4 | 9 |
| 518 | 73.42 | atmosphere | 1000.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 530 | 73.42 | wind | 1.0 | 30 | > th | dose dependent | rect. | 11 | 13 |
| 536 | 73.43 | atmosphere | 1000.0 | 14400 | < th | dose independent | rect. | 13 | 6 |
| 538 | 73.43 | wind | 5.0 | 720 | > th | dose independent | rect. | 23 | 13 |
| 543 | 73.43 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 11 | 8 |
| 547 | 73.44 | atmosphere | 1000.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 553 | 73.44 | atmosphere | 1000.0 | 14400 | > th | dose independent | rect. | 13 | 6 |
| 556 | 73.44 | wind | 7.0 | 30 | < th | dose independent | rect. | 19 | 16 |
| 560 | 73.44 | wind | 9.0 | 270 | < th | dose dependent | rect. | 21 | 12 |
| 584 | 73.46 | temperature | 20.0 | 10 | > th | dose independent | rect. | 6 | 23 |
| 614 | 73.48 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 11 | 10 |
| 615 | 73.48 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 12 |
| 617 | 73.48 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 19 | 16 |
| 628 | 73.49 | wind | 5.0 | 270 | < th | dose independent | rect. | 19 | 14 |
| 666 | 73.52 | radiation | 10.0 | 270 | > th | dose independent | rect. | 11 | 1 |
| 673 | 73.52 | wind | 9.0 | 1440 | < th | dose independent | rect. | 22 | 13 |
| 682 | 73.52 | wind | 1.0 | 30 | > th | dose dependent | rect. | 9 | 13 |
| 728 | 73.54 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 3 | 23 |
| 733 | 73.54 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 735 | 73.55 | radiation | 10.0 | 90 | > th | dose independent | rect. | 11 | 3 |
| 754 | 73.55 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 4 | 22 |
| 762 | 73.56 | radiation | 1.0 | 10 | < th | dose independent | rect. | 3 | 23 |
| 763 | 73.56 | wind | 3.0 | 30 | > th | dose dependent | sin | 3 | NA |
| 778 | 73.57 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 11 | 6 |
| 780 | 73.57 | wind | 9.0 | 30 | < th | dose dependent | rect. | 19 | 16 |
| 781 | 73.57 | radiation | 10.0 | 30 | > th | dose dependent | rect. | 17 | 16 |
| 793 | 73.58 | radiation | 10.0 | 30 | > th | dose dependent | rect. | 6 | 3 |
| 825 | 73.59 | wind | 1.0 | 30 | > th | dose dependent | rect. | 11 | 8 |
| 840 | 73.60 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 11 | 3 |
| 958 | 73.64 | wind | 1.0 | 30 | > th | dose dependent | rect. | 9 | 8 |
| 960 | 73.64 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 9 | 8 |
| 970 | 73.64 | wind | 1.0 | 30 | > th | dose dependent | rect. | 11 | 16 |
| 976 | 73.65 | temperature | 15.0 | 720 | > th | dose independent | rect. | 6 | 9 |
| 987 | 73.65 | atmosphere | 1000.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |