Os02g0522800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os02g0522800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 83.89 | 0.43 | 7.96 | -2.01 | 0.424 | -2.03 | 0.344 | -2.13 | 0.675 | 0.366 | 18.96 | 6428 | -- | -- |
| 87.34 | 0.435 | 8.04 | -2.09 | 0.437 | -1.38 | 0.373 | -- | 0.654 | 0.262 | 18.9 | 6407 | -- | -- |
| 84.37 | 0.428 | 7.96 | -2.02 | 0.422 | -2.04 | -- | -2.15 | 0.675 | 0.144 | 18.99 | 6427 | -- | -- |
| 87.78 | 0.436 | 8.04 | -2.1 | 0.441 | -1.36 | -- | -- | 0.655 | 0.14 | 18.95 | 6237 | -- | -- |
| 95.28 | 0.455 | 7.95 | -2.05 | -- | -2.15 | -- | -2.32 | 0.655 | -- | 18.9 | 6729 | -- | -- |
| 112.36 | 0.497 | 7.96 | -1.22 | 0.453 | -- | 0.359 | -- | 0.987 | 0.304 | -- | -- | -- | -- |
| 112.88 | 0.498 | 7.96 | -1.23 | 0.453 | -- | -- | -- | 0.986 | 0.0993 | -- | -- | -- | -- |
| 99.31 | 0.464 | 8.03 | -2.14 | -- | -1.41 | -- | -- | 0.636 | -- | 19 | 6709 | -- | -- |
| 142.43 | 0.556 | 7.95 | -- | 0.472 | -0.486 | -- | -- | 0.988 | 0.298 | 22.4 | 1623 | -- | -- |
| 125.77 | 0.524 | 7.95 | -1.21 | -- | -- | -- | -- | 0.992 | -- | -- | -- | -- | -- |
| 152.7 | 0.578 | 7.93 | -- | 0.436 | -- | -- | -- | 1.12 | 23.9 | -- | -- | -- | -- |
| 148.76 | 0.568 | 7.96 | -- | -- | -0.548 | -- | -- | 0.962 | -- | 22.47 | 884 | -- | -- |
| 164.69 | 0.599 | 7.92 | -- | -- | -- | -- | -- | 1.13 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 81.43 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 2 | 81.43 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 3 | 81.78 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 4 | 81.78 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 5 | 83.75 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 22 | 4 |
| 7 | 84.05 | wind | 9.0 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 9 | 84.15 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 10 | 84.22 | wind | 9.0 | 14400 | < th | dose independent | rect. | 23 | 14 |
| 11 | 84.24 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 6 |
| 12 | 84.33 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 13 | 84.34 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 16 | 84.48 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 11 | 3 |
| 19 | 84.56 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 24 | 84.65 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 26 | 84.65 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 27 | 84.67 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 30 | 84.70 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 31 | 84.71 | wind | 9.0 | 14400 | > th | dose independent | rect. | 5 | 7 |
| 32 | 84.73 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 34 | 84.74 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 36 | 84.89 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 40 | 84.92 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 8 | 6 |
| 75 | 85.09 | wind | 9.0 | 14400 | < th | dose independent | rect. | 9 | 3 |
| 76 | 85.10 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 23 | 4 |
| 83 | 85.19 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 5 |
| 88 | 85.24 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 23 | 8 |
| 92 | 85.29 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 15 | 8 |
| 95 | 85.30 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 13 | 11 |
| 99 | 85.32 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 16 | 6 |
| 100 | 85.32 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 13 | 11 |
| 103 | 85.32 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 104 | 85.32 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 1 | 6 |
| 108 | 85.33 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 14 | 9 |
| 113 | 85.34 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 121 | 85.36 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 12 | 19 |
| 125 | 85.38 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 126 | 85.38 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 23 | 17 |
| 129 | 85.39 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 5 |
| 137 | 85.42 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 16 | 6 |
| 146 | 85.44 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 23 | 11 |
| 150 | 85.45 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 201 | 85.54 | temperature | 20.0 | 4320 | < th | dose dependent | sin | 8 | NA |
| 203 | 85.54 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 208 | 85.55 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 5 |
| 211 | 85.55 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 5 |
| 241 | 85.57 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 9 | 4 |
| 278 | 85.62 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 8 | 22 |
| 289 | 85.65 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 322 | 85.73 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 21 | 11 |
| 329 | 85.75 | wind | 3.0 | 14400 | < th | dose independent | rect. | 20 | 11 |
| 364 | 85.82 | humidity | 50.0 | 14400 | < th | dose dependent | sin | 6 | NA |
| 374 | 85.84 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 19 | 2 |
| 389 | 85.86 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 3 |
| 392 | 85.86 | wind | 9.0 | 14400 | > th | dose independent | rect. | 23 | 14 |
| 406 | 85.87 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 23 | 23 |
| 425 | 85.90 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 21 | 11 |
| 433 | 85.91 | wind | 3.0 | 14400 | > th | dose independent | rect. | 20 | 12 |
| 452 | 85.93 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 11 | 22 |
| 454 | 85.94 | atmosphere | 1015.0 | 14400 | < th | dose independent | sin | 18 | NA |
| 516 | 86.01 | temperature | 20.0 | 4320 | < th | dose dependent | no | NA | NA |
| 520 | 86.02 | atmosphere | 1015.0 | 14400 | > th | dose independent | sin | 18 | NA |
| 528 | 86.02 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 15 | 23 |
| 530 | 86.03 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 532 | 86.03 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 12 | 2 |
| 553 | 86.05 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 9 |
| 588 | 86.11 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 21 | 11 |
| 599 | 86.14 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 668 | 86.25 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 4 | 23 |
| 688 | 86.30 | temperature | 25.0 | 270 | < th | dose dependent | no | NA | NA |
| 704 | 86.32 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 9 | 15 |
| 728 | 86.36 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 730 | 86.36 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 9 |
| 770 | 86.43 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 11 | 4 |
| 781 | 86.45 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 11 | 3 |
| 792 | 86.45 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 16 |
| 804 | 86.46 | atmosphere | 1015.0 | 14400 | > th | dose dependent | sin | 15 | NA |
| 816 | 86.47 | wind | 3.0 | 14400 | < th | dose independent | rect. | 21 | 17 |
| 838 | 86.49 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 11 | 23 |
| 887 | 86.55 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 11 | 2 |
| 902 | 86.57 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 10 | 7 |
| 915 | 86.58 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 10 | 3 |
| 917 | 86.58 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 23 | 14 |
| 939 | 86.60 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 17 | NA |
| 941 | 86.60 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 979 | 86.64 | humidity | 50.0 | 14400 | < th | dose dependent | no | NA | NA |