Os02g0522300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os02g0522300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 103.09 | 0.477 | 11.3 | -0.529 | 1.07 | -0.718 | 0.657 | -2.35 | -0.0196 | 23.6 | 25.8 | 89 | -- | -- |
| 110.04 | 0.489 | 11.4 | -0.919 | 1.04 | -0.591 | 0.0732 | -- | -0.115 | 23.6 | 27 | 137 | -- | -- |
| 104.47 | 0.476 | 11.3 | -0.556 | 1.05 | -0.709 | -- | -2.12 | -0.0114 | 23.5 | 25.7 | 122 | -- | -- |
| 109.95 | 0.488 | 11.4 | -0.911 | 1.04 | -0.54 | -- | -- | -0.101 | 23.5 | 27 | 114 | -- | -- |
| 150.4 | 0.571 | 11.3 | -0.489 | -- | -1.01 | -- | -2.67 | 0.0508 | -- | 29.71 | 868 | -- | -- |
| 114.16 | 0.501 | 11.3 | -0.784 | 0.952 | -- | -0.021 | -- | 0.0195 | 23.1 | -- | -- | -- | -- |
| 114.16 | 0.5 | 11.3 | -0.783 | 0.953 | -- | -- | -- | 0.0196 | 23.1 | -- | -- | -- | -- |
| 152.64 | 0.575 | 11.4 | -1.05 | -- | -1.07 | -- | -- | -0.142 | -- | 51.21 | 869 | -- | -- |
| 129.93 | 0.534 | 11.3 | -- | 0.978 | -0.156 | -- | -- | 0.0766 | 23.2 | 26.9 | 54 | -- | -- |
| 170.75 | 0.611 | 11.3 | -0.761 | -- | -- | -- | -- | 0.0274 | -- | -- | -- | -- | -- |
| 130.33 | 0.534 | 11.3 | -- | 0.945 | -- | -- | -- | 0.107 | 23.1 | -- | -- | -- | -- |
| 178.41 | 0.624 | 11.3 | -- | -- | 0.702 | -- | -- | 0.192 | -- | 51.21 | 869 | -- | -- |
| 186.02 | 0.637 | 11.3 | -- | -- | -- | -- | -- | 0.112 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 94.59 | radiation | 20 | 4320 | < th | dose dependent | rect. | 19 | 10 |
| 5 | 97.66 | wind | 5 | 90 | < th | dose independent | rect. | 17 | 11 |
| 6 | 98.16 | wind | 1 | 90 | > th | dose independent | rect. | 4 | 3 |
| 7 | 98.35 | radiation | 40 | 43200 | < th | dose dependent | rect. | 19 | 10 |
| 8 | 98.54 | temperature | 20 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 10 | 98.65 | temperature | 20 | 14400 | < th | dose dependent | rect. | 2 | 15 |
| 49 | 98.82 | temperature | 20 | 14400 | < th | dose dependent | rect. | 2 | 8 |
| 61 | 98.84 | temperature | 20 | 14400 | < th | dose dependent | sin | 3 | NA |
| 80 | 98.88 | radiation | 40 | 43200 | < th | dose dependent | rect. | 23 | 6 |
| 92 | 98.91 | radiation | 10 | 90 | < th | dose dependent | rect. | 5 | 2 |
| 100 | 98.94 | wind | 1 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 102 | 98.95 | temperature | 20 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 103 | 98.97 | wind | 9 | 1440 | < th | dose independent | rect. | 6 | 2 |
| 104 | 98.97 | temperature | 10 | 1440 | > th | dose independent | rect. | 6 | 2 |
| 107 | 98.97 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 2 |
| 111 | 98.97 | humidity | 50 | 1440 | > th | dose independent | rect. | 6 | 2 |
| 116 | 98.97 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 6 | 2 |
| 117 | 98.97 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 6 | 2 |
| 118 | 98.97 | temperature | 10 | 1440 | > th | dose independent | rect. | 8 | 22 |
| 128 | 99.00 | humidity | 70 | 720 | > th | dose independent | rect. | 19 | 12 |
| 141 | 99.04 | radiation | 1 | 4320 | < th | dose independent | rect. | 19 | 10 |
| 187 | 99.31 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 2 |
| 191 | 99.33 | humidity | 70 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 199 | 99.37 | temperature | 20 | 14400 | < th | dose dependent | rect. | 12 | 19 |
| 207 | 99.39 | wind | 9 | 720 | < th | dose independent | rect. | 7 | 12 |
| 226 | 99.49 | humidity | 70 | 43200 | > th | dose independent | rect. | 4 | 5 |
| 254 | 99.55 | humidity | 70 | 43200 | < th | dose independent | rect. | 7 | 2 |
| 271 | 99.58 | temperature | 20 | 14400 | < th | dose dependent | no | NA | NA |
| 281 | 99.59 | temperature | 20 | 14400 | < th | dose dependent | rect. | 16 | 23 |
| 305 | 99.63 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 368 | 99.79 | radiation | 40 | 43200 | < th | dose dependent | rect. | 18 | 8 |
| 374 | 99.83 | radiation | 10 | 4320 | < th | dose dependent | rect. | 1 | 4 |
| 381 | 99.86 | humidity | 90 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 382 | 99.87 | humidity | 90 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 384 | 99.88 | radiation | 20 | 14400 | < th | dose independent | rect. | 19 | 11 |
| 385 | 99.88 | radiation | 40 | 43200 | < th | dose dependent | rect. | 18 | 2 |
| 391 | 99.90 | temperature | 30 | 720 | < th | dose independent | rect. | 18 | 13 |
| 394 | 99.91 | radiation | 1 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 396 | 99.91 | atmosphere | 1015 | 90 | < th | dose independent | rect. | 7 | 22 |
| 403 | 99.93 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 404 | 99.93 | radiation | 1 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 416 | 99.95 | atmosphere | 1015 | 30 | < th | dose independent | rect. | 18 | 11 |
| 437 | 99.99 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 452 | 100.03 | temperature | 25 | 720 | > th | dose independent | rect. | 16 | 3 |
| 457 | 100.04 | wind | 7 | 720 | < th | dose independent | rect. | 16 | 18 |
| 459 | 100.05 | wind | 1 | 270 | > th | dose independent | rect. | 4 | 1 |
| 467 | 100.08 | humidity | 80 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 471 | 100.08 | temperature | 10 | 30 | > th | dose dependent | rect. | 18 | 11 |
| 479 | 100.10 | radiation | 10 | 4320 | < th | dose dependent | rect. | 23 | 6 |
| 493 | 100.14 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 15 | 9 |
| 513 | 100.18 | wind | 1 | 10 | > th | dose dependent | rect. | 4 | 3 |
| 516 | 100.19 | wind | 1 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 592 | 100.32 | humidity | 60 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 604 | 100.34 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 617 | 100.35 | atmosphere | 1015 | 43200 | > th | dose dependent | sin | 12 | NA |
| 637 | 100.37 | radiation | 30 | 43200 | < th | dose independent | rect. | 17 | 12 |
| 664 | 100.39 | humidity | 70 | 720 | > th | dose independent | rect. | 19 | 3 |
| 697 | 100.41 | wind | 7 | 720 | < th | dose independent | rect. | 16 | 3 |
| 739 | 100.45 | temperature | 10 | 43200 | > th | dose dependent | rect. | 2 | 1 |
| 755 | 100.46 | temperature | 10 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 786 | 100.48 | humidity | 70 | 90 | > th | dose dependent | rect. | 5 | 2 |
| 804 | 100.49 | humidity | 50 | 720 | > th | dose dependent | rect. | 19 | 3 |
| 830 | 100.51 | temperature | 10 | 43200 | > th | dose dependent | rect. | 22 | 5 |
| 864 | 100.52 | radiation | 10 | 90 | < th | dose dependent | rect. | 5 | 12 |
| 893 | 100.54 | temperature | 20 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 918 | 100.55 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 15 | 9 |
| 940 | 100.56 | temperature | 20 | 43200 | < th | dose independent | rect. | 22 | 1 |