Os02g0522100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0522100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 67.91 | 0.387 | 8.79 | -0.206 | 0.553 | 0.23 | 0.235 | 0.25 | -0.0399 | 0.29 | 1006 | 472 | -- | -- |
| 68.1 | 0.384 | 8.79 | -0.211 | 0.555 | 0.234 | 0.226 | -- | -0.0477 | 0.29 | 1006 | 464 | -- | -- |
| 68.06 | 0.384 | 8.79 | -0.207 | 0.549 | 0.234 | -- | 0.226 | -0.0405 | 0.249 | 1006 | 473 | -- | -- |
| 68.29 | 0.385 | 8.79 | -0.216 | 0.552 | 0.241 | -- | -- | -0.0559 | 0.285 | 1006 | 472 | -- | -- |
| 86.31 | 0.435 | 8.78 | -0.204 | -- | 0.227 | -- | 0.0676 | -0.042 | -- | 1006 | 539 | -- | -- |
| 72.18 | 0.398 | 8.77 | -0.212 | 0.544 | -- | 0.227 | -- | 0.0489 | 0.601 | -- | -- | -- | -- |
| 72.4 | 0.398 | 8.77 | -0.221 | 0.544 | -- | -- | -- | 0.0478 | 0.588 | -- | -- | -- | -- |
| 86.34 | 0.435 | 8.78 | -0.205 | -- | 0.228 | -- | -- | -0.0449 | -- | 1006 | 440 | -- | -- |
| 69.57 | 0.388 | 8.79 | -- | 0.542 | 0.241 | -- | -- | -0.0357 | 0.238 | 1006 | 460 | -- | -- |
| 90.93 | 0.446 | 8.76 | -0.202 | -- | -- | -- | -- | 0.0572 | -- | -- | -- | -- | -- |
| 73.69 | 0.402 | 8.76 | -- | 0.54 | -- | -- | -- | 0.0724 | 0.568 | -- | -- | -- | -- |
| 87.33 | 0.435 | 8.78 | -- | -- | 0.234 | -- | -- | -0.0275 | -- | 1006 | 66 | -- | -- |
| 92.01 | 0.448 | 8.75 | -- | -- | -- | -- | -- | 0.0796 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 63.69 | temperature | 25.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 8 | 64.81 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 2 | 5 |
| 14 | 65.29 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 6 | 1 |
| 37 | 65.85 | radiation | 10.0 | 30 | < th | dose independent | rect. | 6 | 2 |
| 43 | 65.98 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 57 | 66.14 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 62 | 66.17 | atmosphere | 1010.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 65 | 66.21 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 71 | 66.25 | temperature | 25.0 | 90 | > th | dose independent | rect. | 3 | 13 |
| 92 | 66.39 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 6 | 10 |
| 93 | 66.40 | wind | 3.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 102 | 66.48 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 4 | 2 |
| 119 | 66.62 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 136 | 66.72 | temperature | 20.0 | 270 | > th | dose independent | rect. | 20 | 4 |
| 144 | 66.78 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 11 |
| 149 | 66.81 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 18 | 9 |
| 159 | 66.86 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 20 | 5 |
| 171 | 66.92 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 6 | 12 |
| 185 | 67.00 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 3 | 3 |
| 193 | 67.04 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 206 | 67.09 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 12 |
| 209 | 67.11 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 10 |
| 211 | 67.12 | temperature | 25.0 | 270 | < th | dose independent | rect. | 7 | 6 |
| 223 | 67.15 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 3 | 11 |
| 231 | 67.17 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 7 | 6 |
| 262 | 67.26 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 4 | 12 |
| 269 | 67.28 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 271 | 67.28 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 12 | 1 |
| 288 | 67.32 | radiation | 10.0 | 30 | < th | dose independent | rect. | 6 | 10 |
| 294 | 67.33 | temperature | 25.0 | 270 | < th | dose independent | sin | 4 | NA |
| 334 | 67.37 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 20 | 10 |
| 357 | 67.43 | temperature | 25.0 | 90 | > th | dose independent | sin | 3 | NA |
| 382 | 67.48 | radiation | 10.0 | 30 | < th | dose independent | rect. | 6 | 12 |
| 393 | 67.50 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 6 | 14 |
| 414 | 67.54 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 6 | 12 |
| 418 | 67.56 | temperature | 30.0 | 30 | < th | dose independent | rect. | 11 | 1 |
| 435 | 67.60 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 11 | 8 |
| 441 | 67.61 | wind | 1.0 | 30 | > th | dose independent | rect. | 12 | 23 |
| 448 | 67.62 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 22 | 5 |
| 449 | 67.63 | temperature | 25.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 454 | 67.65 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 17 | 3 |
| 458 | 67.65 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 18 | 12 |
| 470 | 67.68 | temperature | 25.0 | 720 | < th | dose independent | rect. | 24 | 8 |
| 481 | 67.69 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 7 | 23 |
| 482 | 67.69 | temperature | 25.0 | 10 | > th | dose dependent | sin | 4 | NA |
| 487 | 67.70 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 11 | 1 |
| 500 | 67.71 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 16 | 8 |
| 543 | 67.78 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 6 | 5 |
| 557 | 67.81 | wind | 9.0 | 30 | < th | dose independent | rect. | 12 | 23 |
| 563 | 67.82 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 567 | 67.82 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 573 | 67.82 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 581 | 67.82 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 11 | 8 |
| 583 | 67.83 | radiation | 1.0 | 30 | > th | dose independent | rect. | 11 | 1 |
| 588 | 67.83 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 7 | 12 |
| 591 | 67.83 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 7 | 12 |
| 592 | 67.84 | wind | 1.0 | 30 | > th | dose independent | rect. | 11 | 1 |
| 603 | 67.85 | temperature | 10.0 | 30 | > th | dose independent | rect. | 11 | 1 |
| 606 | 67.85 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 11 | 1 |
| 607 | 67.85 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 11 | 1 |
| 611 | 67.85 | temperature | 10.0 | 30 | > th | dose independent | rect. | 12 | 23 |
| 612 | 67.85 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 11 | 1 |
| 614 | 67.85 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 16 | 5 |
| 620 | 67.86 | atmosphere | 1005.0 | 720 | > th | dose dependent | rect. | 7 | 1 |
| 626 | 67.87 | humidity | 50.0 | 30 | > th | dose independent | rect. | 11 | 1 |
| 633 | 67.88 | humidity | 70.0 | 720 | > th | dose independent | rect. | 19 | 1 |
| 639 | 67.88 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 15 | 7 |
| 652 | 67.89 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 12 | 23 |
| 653 | 67.89 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 11 | 1 |
| 657 | 67.89 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 12 | 23 |
| 671 | 67.91 | radiation | 30.0 | 270 | < th | dose independent | rect. | 12 | 20 |
| 680 | 67.92 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 4 | 15 |
| 682 | 67.92 | wind | 1.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 703 | 67.93 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 12 | 19 |
| 708 | 67.94 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 20 | 23 |
| 709 | 67.94 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 734 | 67.97 | wind | 9.0 | 30 | < th | dose independent | rect. | 11 | 1 |
| 735 | 67.97 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 765 | 67.99 | humidity | 50.0 | 30 | > th | dose independent | rect. | 12 | 23 |
| 778 | 68.01 | temperature | 30.0 | 720 | > th | dose independent | rect. | 13 | 1 |
| 781 | 68.01 | wind | 7.0 | 4320 | > th | dose independent | rect. | 22 | 5 |
| 784 | 68.01 | radiation | 1.0 | 720 | < th | dose independent | rect. | 16 | 8 |
| 807 | 68.02 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 19 | 21 |
| 814 | 68.03 | radiation | 20.0 | 270 | < th | dose independent | rect. | 14 | 17 |
| 847 | 68.06 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 12 | 23 |
| 850 | 68.06 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 3 | 4 |
| 855 | 68.06 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 12 | 11 |
| 863 | 68.07 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 884 | 68.08 | wind | 7.0 | 4320 | > th | dose independent | rect. | 24 | 3 |
| 887 | 68.08 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 10 |
| 888 | 68.08 | radiation | 20.0 | 90 | < th | dose independent | rect. | 15 | 19 |
| 916 | 68.09 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 4 | 10 |
| 921 | 68.09 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 14 |
| 927 | 68.10 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 21 | 20 |
| 935 | 68.10 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 4 | 13 |
| 968 | 68.13 | atmosphere | 1005.0 | 720 | > th | dose independent | rect. | 20 | 21 |
| 977 | 68.14 | temperature | 25.0 | 720 | > th | dose independent | rect. | 16 | 3 |
| 995 | 68.15 | temperature | 30.0 | 10 | < th | dose independent | rect. | 11 | 4 |