Os02g0520500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0520500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 61.52 | 0.369 | 2.93 | -0.212 | 0.128 | 0.467 | -0.012 | -14 | -0.0334 | 10.2 | 19.41 | 30 | 2.06 | 1.05 |
| 69.06 | 0.39 | 2.95 | 0.0104 | 0.128 | 1.59 | 0.0142 | -- | -0.0357 | 10.1 | 19.41 | 30 | 2.06 | 1.05 |
| 61.52 | 0.368 | 2.93 | -0.212 | 0.128 | 0.466 | -- | -14 | -0.0334 | 10.1 | 19.41 | 30 | 2.06 | 1.05 |
| 69.05 | 0.387 | 2.95 | 0.0258 | 0.115 | 1.57 | -- | -- | -0.0223 | 10.2 | 17.96 | 16 | 2 | 1.01 |
| 62.51 | 0.37 | 2.93 | -0.214 | -- | 0.443 | -- | -14 | -0.0318 | -- | 19.41 | 30 | 2.06 | 1.05 |
| 86.99 | 0.437 | 2.92 | 0.00967 | 0.144 | -- | -0.0139 | -- | 0.0839 | 7.06 | -- | -- | -- | -- |
| 86.99 | 0.437 | 2.92 | 0.00942 | 0.144 | -- | -- | -- | 0.0839 | 7.08 | -- | -- | -- | -- |
| 70.06 | 0.392 | 2.95 | 0.00933 | -- | 1.56 | -- | -- | -0.034 | -- | 19.41 | 30 | 2.06 | 1.05 |
| 69.02 | 0.387 | 2.95 | -- | 0.119 | 1.57 | -- | -- | -0.0248 | 10.1 | 17.93 | 23 | 2.01 | 1.08 |
| 88.09 | 0.439 | 2.93 | 0.0122 | -- | -- | -- | -- | 0.0865 | -- | -- | -- | -- | -- |
| 87 | 0.436 | 2.92 | -- | 0.144 | -- | -- | -- | 0.0828 | 7.07 | -- | -- | -- | -- |
| 70.06 | 0.391 | 2.95 | -- | -- | 1.56 | -- | -- | -0.0351 | -- | 19.41 | 30 | 2.06 | 1.05 |
| 88.09 | 0.438 | 2.93 | -- | -- | -- | -- | -- | 0.0851 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 61.67 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 2 | 61.74 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 3 | 61.76 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 7 | 61.87 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 10 | 61.91 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 12 | 61.94 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 15 | 62.00 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 18 | 62.01 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 20 | 62.03 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 22 | 62.03 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 23 | 62.03 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 27 | 62.03 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 29 | 62.03 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 34 | 62.03 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 35 | 62.03 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 36 | 62.03 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 39 | 62.03 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 44 | 62.03 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 63 | 62.35 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 64 | 62.35 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 67 | 62.35 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 71 | 62.35 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 80 | 62.35 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 81 | 62.35 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 101 | 62.35 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 109 | 62.37 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 111 | 62.73 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 116 | 63.09 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 126 | 63.39 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 169 | 64.66 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 170 | 64.66 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 180 | 66.76 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 188 | 69.30 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 193 | 69.82 | temperature | 30.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 249 | 74.22 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 259 | 74.69 | temperature | 25.0 | 270 | > th | dose independent | rect. | 23 | 4 |
| 278 | 75.78 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 23 | 4 |
| 294 | 76.20 | wind | 1.0 | 10 | < th | dose independent | rect. | 15 | 12 |
| 295 | 76.21 | wind | 1.0 | 10 | < th | dose independent | rect. | 21 | 6 |
| 322 | 76.78 | humidity | 90.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 385 | 77.89 | wind | 1.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 394 | 78.05 | wind | 1.0 | 10 | > th | dose independent | sin | 15 | NA |
| 463 | 79.04 | humidity | 90.0 | 10 | > th | dose independent | rect. | 24 | 3 |
| 487 | 79.46 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 502 | 79.64 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 512 | 79.82 | wind | 1.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 524 | 79.95 | wind | 9.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 535 | 80.07 | wind | 5.0 | 90 | > th | dose dependent | rect. | 5 | 3 |
| 538 | 80.08 | wind | 5.0 | 90 | > th | dose dependent | rect. | 7 | 1 |
| 540 | 80.10 | wind | 5.0 | 90 | > th | dose independent | rect. | 5 | 3 |
| 542 | 80.10 | radiation | 10.0 | 10 | < th | dose independent | rect. | 3 | 23 |
| 549 | 80.13 | radiation | 20.0 | 90 | > th | dose independent | rect. | 6 | 1 |
| 566 | 80.13 | radiation | 20.0 | 90 | > th | dose dependent | rect. | 6 | 1 |
| 583 | 80.14 | wind | 3.0 | 10 | < th | dose dependent | rect. | 22 | 5 |
| 628 | 80.38 | wind | 3.0 | 30 | < th | dose dependent | rect. | 19 | 8 |
| 635 | 80.43 | wind | 3.0 | 30 | < th | dose dependent | rect. | 16 | 11 |
| 650 | 80.52 | wind | 5.0 | 30 | > th | dose dependent | rect. | 1 | 7 |
| 663 | 80.57 | wind | 1.0 | 10 | > th | dose independent | no | NA | NA |
| 761 | 80.89 | wind | 3.0 | 30 | < th | dose dependent | rect. | 11 | 16 |
| 855 | 81.00 | wind | 5.0 | 10 | > th | dose independent | rect. | 1 | 7 |
| 867 | 81.01 | wind | 5.0 | 10 | > th | dose independent | rect. | 3 | 5 |
| 885 | 81.05 | wind | 5.0 | 10 | > th | dose independent | rect. | 7 | 1 |
| 892 | 81.08 | wind | 1.0 | 10 | < th | dose independent | sin | 16 | NA |
| 907 | 81.16 | temperature | 10.0 | 720 | > th | dose independent | rect. | 3 | 12 |
| 908 | 81.16 | temperature | 10.0 | 720 | > th | dose independent | rect. | 15 | 12 |
| 910 | 81.17 | wind | 1.0 | 10 | > th | dose independent | rect. | 9 | 23 |
| 921 | 81.22 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 3 | 12 |
| 924 | 81.24 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 15 | 12 |
| 926 | 81.24 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 15 | 12 |
| 969 | 81.36 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 987 | 81.42 | humidity | 50.0 | 720 | > th | dose independent | rect. | 3 | 12 |