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Os02g0519900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Elongation factor EF-2 (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 15 (0.0231) R2 : 0.596
β1 : 0.748 (0.0846) R2dD : 0.0718 R2D : 0.0575
β2 : 1.47 (0.0596) R2dC : 0.538 R2C : 0.526
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0949 (0.0493) R2dN8 : 0.0044 R2N8 : -0.00585
σ : 0.434
deviance : 86.08
__
_____
C
peak time of C : 16.7
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
72.88 0.398 15 0.838 1.38 -0.57 0.663 0.528 0.137 18.3 10 10 -- --
73.51 0.402 15 0.791 1.38 -0.599 0.863 -- 0.125 18.4 10 10 -- --
72.9 0.401 15 0.827 1.39 -0.563 -- 0.607 0.137 18.3 10 10 -- --
75.25 0.407 15 0.779 1.38 -0.558 -- -- 0.126 18.2 10 10 -- --
94.06 0.452 15 0.436 -- -1.44 -- -0.235 0.00681 -- 0.06864 586 -- --
85.76 0.434 15 0.746 1.47 -- 0.36 -- 0.093 16.7 -- -- -- --
86.08 0.434 15 0.748 1.47 -- -- -- 0.0949 16.7 -- -- -- --
92.38 0.448 15 0.693 -- -1.57 -- -- 0.032 -- 2.18 599 -- --
89.03 0.439 15 -- 1.34 -0.537 -- -- 0.0337 18 16.54 10 -- --
200.42 0.662 15 0.692 -- -- -- -- 0.0566 -- -- -- -- --
100.82 0.47 15 -- 1.45 -- -- -- 0.0117 16.7 -- -- -- --
101.89 0.47 15 -- -- -1.54 -- -- -0.0414 -- 0.009851 596 -- --
213.05 0.681 15 -- -- -- -- -- -0.0202 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 62.82 wind 5.0 270 < th dose independent rect. 1 6
3 63.72 radiation 20.0 270 < th dose independent rect. 1 7
4 64.04 radiation 30.0 90 < th dose independent rect. 3 6
6 64.05 temperature 15.0 270 > th dose independent rect. 14 16
7 64.13 radiation 40.0 270 < th dose independent rect. 13 17
9 64.30 radiation 40.0 270 < th dose dependent rect. 1 8
23 64.60 precipitation 0.1 270 < th dose independent rect. 1 6
24 64.60 precipitation 0.1 270 < th dose dependent rect. 1 6
26 64.66 wind 9.0 270 < th dose independent rect. 7 18
27 64.72 precipitation 0.1 270 < th dose independent rect. 14 16
29 64.72 precipitation 0.1 270 < th dose dependent rect. 14 16
33 64.84 wind 9.0 270 < th dose independent rect. 6 8
38 64.95 temperature 10.0 270 > th dose independent rect. 6 8
39 64.95 atmosphere 995.0 270 > th dose independent rect. 6 8
40 64.95 atmosphere 1015.0 270 < th dose independent rect. 6 8
41 64.95 precipitation 0.1 270 < th dose independent rect. 6 8
43 64.95 precipitation 0.1 270 < th dose dependent rect. 6 8
46 65.03 humidity 70.0 90 > th dose independent rect. 3 6
47 65.04 humidity 70.0 270 > th dose independent rect. 1 6
51 65.09 temperature 10.0 270 > th dose independent rect. 1 6
53 65.09 temperature 30.0 270 < th dose independent rect. 1 6
54 65.09 humidity 50.0 270 > th dose independent rect. 1 6
56 65.09 atmosphere 995.0 270 > th dose independent rect. 1 6
57 65.09 atmosphere 1015.0 270 < th dose independent rect. 1 6
61 65.09 temperature 10.0 270 > th dose independent rect. 7 18
63 65.15 temperature 10.0 270 > th dose dependent rect. 1 6
66 65.17 wind 5.0 270 < th dose independent rect. 3 2
68 65.18 temperature 30.0 90 < th dose independent rect. 3 6
69 65.19 radiation 30.0 90 < th dose independent rect. 3 8
82 65.34 precipitation 0.1 90 < th dose independent rect. 3 6
84 65.34 precipitation 0.1 90 < th dose dependent rect. 3 6
85 65.37 wind 1.0 270 > th dose independent rect. 1 6
99 65.40 radiation 20.0 90 < th dose independent rect. 15 18
112 65.47 wind 9.0 270 < th dose independent rect. 14 16
127 65.58 precipitation 0.1 270 < th dose independent rect. 2 16
128 65.58 precipitation 0.1 270 < th dose dependent rect. 2 16
135 65.69 radiation 40.0 90 < th dose dependent rect. 15 18
138 65.72 wind 9.0 270 < th dose dependent rect. 1 6
146 65.75 temperature 10.0 90 > th dose independent rect. 3 6
149 65.75 atmosphere 995.0 90 > th dose independent rect. 3 6
150 65.75 atmosphere 1015.0 90 < th dose independent rect. 3 6
152 65.75 radiation 1.0 270 < th dose dependent rect. 18 8
159 65.80 radiation 40.0 90 < th dose dependent rect. 13 20
163 65.84 humidity 50.0 270 > th dose independent rect. 7 6
172 65.91 wind 9.0 90 < th dose dependent rect. 3 6
174 65.93 temperature 15.0 270 > th dose independent rect. 2 16
175 65.93 radiation 20.0 90 < th dose independent rect. 13 20
185 66.02 radiation 1.0 270 < th dose independent rect. 18 8
186 66.02 temperature 10.0 270 > th dose dependent rect. 3 3
188 66.05 radiation 40.0 90 < th dose dependent rect. 3 8
189 66.07 atmosphere 1015.0 270 < th dose independent rect. 13 18
191 66.10 humidity 50.0 270 > th dose independent rect. 6 8
194 66.11 wind 9.0 270 < th dose independent rect. 5 22
195 66.12 precipitation 0.1 270 < th dose independent rect. 3 2
196 66.12 precipitation 0.1 270 < th dose dependent rect. 3 2
202 66.16 precipitation 0.1 270 < th dose independent rect. 7 18
204 66.16 precipitation 0.1 270 < th dose dependent rect. 7 18
228 66.24 humidity 50.0 270 > th dose dependent rect. 18 8
229 66.26 wind 9.0 270 < th dose independent rect. 18 8
231 66.26 atmosphere 995.0 270 > th dose independent rect. 14 16
235 66.27 temperature 10.0 270 > th dose independent rect. 18 8
236 66.27 humidity 50.0 270 > th dose independent rect. 18 8
241 66.27 atmosphere 1015.0 270 < th dose independent rect. 2 16
246 66.30 atmosphere 995.0 270 > th dose independent rect. 18 8
261 66.37 atmosphere 995.0 270 > th dose independent rect. 13 18
266 66.39 wind 1.0 270 > th dose independent rect. 7 6
283 66.45 temperature 30.0 270 < th dose independent rect. 18 8
314 66.58 temperature 15.0 270 > th dose independent rect. 12 9
319 66.60 radiation 40.0 90 < th dose independent rect. 3 17
321 66.61 wind 1.0 270 > th dose independent rect. 8 17
323 66.62 radiation 1.0 270 > th dose independent rect. 7 6
324 66.62 radiation 1.0 270 < th dose dependent rect. 5 21
338 66.67 precipitation 0.1 270 < th dose independent rect. 18 8
341 66.67 precipitation 0.1 270 < th dose dependent rect. 18 8
345 66.72 radiation 10.0 270 < th dose independent rect. 3 3
347 66.73 temperature 10.0 270 > th dose independent rect. 3 2
349 66.73 temperature 30.0 270 < th dose independent rect. 3 2
350 66.73 humidity 50.0 270 > th dose independent rect. 3 2
353 66.73 atmosphere 995.0 270 > th dose independent rect. 3 2
354 66.73 atmosphere 1010.0 270 < th dose independent rect. 3 2
360 66.73 temperature 15.0 10 > th dose independent rect. 16 17
362 66.73 temperature 10.0 270 > th dose independent rect. 5 22
367 66.74 radiation 20.0 270 < th dose dependent rect. 3 2
376 66.75 temperature 10.0 10 > th dose dependent rect. 3 6
397 66.81 wind 1.0 270 > th dose independent rect. 13 18
407 66.85 atmosphere 1010.0 270 < th dose independent rect. 12 9
409 66.86 radiation 10.0 10 < th dose independent rect. 4 18
411 66.87 precipitation 0.1 10 < th dose independent rect. 3 6
414 66.87 precipitation 0.1 10 < th dose dependent rect. 3 6
435 66.94 wind 9.0 270 < th dose independent rect. 2 16
530 67.21 wind 1.0 270 > th dose independent rect. 3 2
561 67.30 wind 9.0 270 < th dose dependent rect. 3 3
577 67.38 precipitation 0.1 270 < th dose independent rect. 12 8
579 67.38 atmosphere 995.0 270 > th dose independent rect. 2 16
581 67.38 precipitation 0.1 270 < th dose dependent rect. 12 8
588 67.41 wind 9.0 10 < th dose independent rect. 9 18
603 67.44 radiation 40.0 10 < th dose dependent rect. 14 19
612 67.46 temperature 10.0 270 > th dose independent rect. 20 16
613 67.46 atmosphere 995.0 270 > th dose independent rect. 20 16
622 67.48 humidity 50.0 270 > th dose independent rect. 20 16
667 67.55 wind 9.0 270 < th dose independent rect. 20 16
690 67.59 precipitation 0.1 10 < th dose independent rect. 9 18
693 67.59 precipitation 0.1 10 < th dose dependent rect. 9 18
744 67.73 atmosphere 995.0 270 > th dose independent rect. 7 18
758 67.78 wind 1.0 270 > th dose independent rect. 12 8
767 67.81 radiation 40.0 270 < th dose dependent rect. 1 16
779 67.85 wind 1.0 270 > th dose independent rect. 19 7
792 67.89 humidity 70.0 90 > th dose independent rect. 3 8
812 67.94 radiation 40.0 10 < th dose independent rect. 15 18
828 68.00 radiation 1.0 10 > th dose independent rect. 9 6
831 68.00 atmosphere 995.0 90 > th dose independent rect. 9 18
832 68.00 precipitation 0.1 10 < th dose independent rect. 15 18
835 68.00 precipitation 0.1 10 < th dose dependent rect. 15 18
862 68.06 atmosphere 1015.0 10 < th dose independent rect. 15 18
867 68.07 temperature 10.0 10 > th dose independent rect. 9 6
869 68.07 atmosphere 995.0 10 > th dose independent rect. 9 6
870 68.07 atmosphere 1015.0 10 < th dose independent rect. 9 6
871 68.07 precipitation 0.1 10 < th dose independent rect. 9 6
874 68.07 precipitation 0.1 270 < th dose independent rect. 20 16
878 68.07 precipitation 0.1 10 < th dose dependent rect. 9 6
879 68.07 precipitation 0.1 270 < th dose dependent rect. 20 16
924 68.16 atmosphere 995.0 270 > th dose independent rect. 12 8
949 68.20 radiation 40.0 10 < th dose dependent rect. 4 18
950 68.21 wind 9.0 270 < th dose independent rect. 12 8
959 68.24 radiation 40.0 270 < th dose independent rect. 1 17
966 68.26 wind 9.0 10 < th dose independent rect. 16 17
977 68.28 humidity 50.0 270 > th dose independent rect. 9 1
987 68.28 radiation 1.0 270 < th dose independent rect. 6 20
991 68.29 humidity 50.0 90 > th dose dependent rect. 3 6
994 68.30 temperature 10.0 270 > th dose independent rect. 9 1
995 68.30 atmosphere 995.0 270 > th dose independent rect. 9 1
996 68.30 atmosphere 1015.0 270 < th dose independent rect. 9 1