Os02g0519800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os02g0519800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 96.14 | 0.461 | 6.77 | -0.265 | 0.852 | 0.557 | 0.251 | -0.295 | 0.18 | 5.71 | 1009 | 1874 | -- | -- |
| 96.4 | 0.457 | 6.76 | -0.242 | 0.852 | 0.577 | 0.211 | -- | 0.189 | 5.72 | 1009 | 1971 | -- | -- |
| 96.28 | 0.457 | 6.77 | -0.263 | 0.853 | 0.552 | -- | -0.275 | 0.178 | 5.67 | 1009 | 1929 | -- | -- |
| 96.5 | 0.458 | 6.76 | -0.239 | 0.851 | 0.575 | -- | -- | 0.189 | 5.67 | 1009 | 1968 | -- | -- |
| 132.09 | 0.535 | 6.76 | -0.233 | -- | 0.637 | -- | -0.277 | 0.265 | -- | 1009 | 1293 | -- | -- |
| 105.9 | 0.482 | 6.79 | -0.109 | 0.89 | -- | 0.0595 | -- | 0.0747 | 5.43 | -- | -- | -- | -- |
| 105.91 | 0.482 | 6.79 | -0.108 | 0.89 | -- | -- | -- | 0.0744 | 5.42 | -- | -- | -- | -- |
| 132.61 | 0.536 | 6.76 | -0.205 | -- | 0.645 | -- | -- | 0.27 | -- | 1009 | 1294 | -- | -- |
| 97.92 | 0.461 | 6.76 | -- | 0.848 | 0.526 | -- | -- | 0.204 | 5.65 | 1009 | 1873 | -- | -- |
| 147.15 | 0.567 | 6.8 | -0.0786 | -- | -- | -- | -- | 0.0963 | -- | -- | -- | -- | -- |
| 106.22 | 0.482 | 6.79 | -- | 0.888 | -- | -- | -- | 0.0865 | 5.43 | -- | -- | -- | -- |
| 133.68 | 0.538 | 6.76 | -- | -- | 0.622 | -- | -- | 0.263 | -- | 1009 | 1256 | -- | -- |
| 147.31 | 0.567 | 6.8 | -- | -- | -- | -- | -- | 0.105 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 95.33 | radiation | 10 | 1440 | < th | dose independent | rect. | 18 | 9 |
| 2 | 95.68 | radiation | 10 | 1440 | < th | dose independent | rect. | 18 | 7 |
| 5 | 96.35 | atmosphere | 1010 | 1440 | < th | dose independent | rect. | 9 | 2 |
| 6 | 96.38 | humidity | 60 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 7 | 96.39 | radiation | 10 | 1440 | < th | dose independent | rect. | 18 | 3 |
| 9 | 96.48 | atmosphere | 1010 | 1440 | > th | dose independent | rect. | 9 | 2 |
| 11 | 96.65 | wind | 1 | 270 | < th | dose independent | rect. | 12 | 13 |
| 15 | 96.68 | temperature | 15 | 10 | > th | dose dependent | rect. | 15 | 13 |
| 16 | 96.69 | wind | 1 | 270 | < th | dose independent | rect. | 23 | 2 |
| 17 | 96.72 | atmosphere | 1010 | 720 | < th | dose independent | rect. | 5 | 18 |
| 18 | 96.73 | atmosphere | 1010 | 1440 | < th | dose independent | rect. | 7 | 4 |
| 19 | 96.74 | temperature | 20 | 30 | > th | dose independent | rect. | 15 | 13 |
| 27 | 96.88 | wind | 1 | 90 | > th | dose independent | sin | 18 | NA |
| 34 | 96.94 | temperature | 20 | 30 | > th | dose independent | rect. | 13 | 15 |
| 35 | 96.94 | wind | 1 | 30 | > th | dose independent | rect. | 23 | 23 |
| 43 | 97.01 | atmosphere | 1010 | 1440 | < th | dose independent | rect. | 6 | 11 |
| 58 | 97.11 | atmosphere | 1010 | 1440 | < th | dose independent | sin | 2 | NA |
| 96 | 97.22 | temperature | 20 | 270 | > th | dose independent | rect. | 11 | 16 |
| 98 | 97.23 | humidity | 60 | 43200 | > th | dose independent | rect. | 21 | 3 |
| 123 | 97.28 | wind | 3 | 30 | < th | dose dependent | rect. | 15 | 19 |
| 127 | 97.30 | radiation | 1 | 1440 | < th | dose independent | rect. | 13 | 2 |
| 130 | 97.30 | atmosphere | 1010 | 1440 | < th | dose independent | rect. | 16 | 19 |
| 131 | 97.30 | radiation | 1 | 1440 | < th | dose dependent | rect. | 13 | 2 |
| 146 | 97.32 | humidity | 50 | 43200 | < th | dose dependent | rect. | 20 | 2 |
| 155 | 97.33 | atmosphere | 1010 | 1440 | < th | dose independent | rect. | 20 | 15 |
| 158 | 97.33 | radiation | 20 | 1440 | < th | dose dependent | rect. | 18 | 10 |
| 203 | 97.39 | atmosphere | 1010 | 1440 | < th | dose independent | rect. | 21 | 21 |
| 209 | 97.41 | humidity | 50 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 210 | 97.41 | atmosphere | 1010 | 1440 | > th | dose independent | rect. | 6 | 5 |
| 211 | 97.41 | temperature | 20 | 90 | > th | dose independent | rect. | 21 | 10 |
| 236 | 97.44 | wind | 1 | 90 | < th | dose independent | sin | 18 | NA |
| 239 | 97.44 | atmosphere | 1010 | 1440 | > th | dose independent | rect. | 6 | 7 |
| 251 | 97.45 | radiation | 1 | 1440 | > th | dose independent | rect. | 13 | 2 |
| 278 | 97.48 | humidity | 60 | 43200 | < th | dose independent | rect. | 21 | 3 |
| 292 | 97.49 | atmosphere | 1010 | 1440 | > th | dose independent | rect. | 6 | 9 |
| 298 | 97.50 | atmosphere | 1010 | 1440 | < th | dose independent | no | NA | NA |
| 299 | 97.50 | wind | 7 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 312 | 97.51 | atmosphere | 1010 | 1440 | > th | dose independent | rect. | 6 | 11 |
| 321 | 97.52 | atmosphere | 1010 | 1440 | > th | dose independent | sin | 1 | NA |
| 366 | 97.55 | temperature | 20 | 30 | > th | dose independent | rect. | 20 | 23 |
| 385 | 97.59 | radiation | 10 | 1440 | < th | dose independent | rect. | 16 | 12 |
| 387 | 97.59 | atmosphere | 1010 | 1440 | > th | dose independent | rect. | 5 | 18 |
| 400 | 97.60 | atmosphere | 1010 | 1440 | < th | dose independent | rect. | 9 | 23 |
| 434 | 97.63 | temperature | 15 | 10 | > th | dose dependent | sin | 15 | NA |
| 437 | 97.64 | radiation | 10 | 1440 | < th | dose independent | rect. | 16 | 4 |
| 448 | 97.65 | temperature | 20 | 10 | > th | dose independent | rect. | 21 | 10 |
| 452 | 97.65 | wind | 3 | 30 | < th | dose dependent | rect. | 15 | 16 |
| 480 | 97.68 | humidity | 60 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 486 | 97.69 | atmosphere | 1010 | 1440 | > th | dose independent | rect. | 16 | 19 |
| 495 | 97.70 | radiation | 40 | 1440 | < th | dose dependent | rect. | 18 | 2 |
| 507 | 97.72 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 4 |
| 544 | 97.74 | wind | 1 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 569 | 97.78 | atmosphere | 1010 | 1440 | > th | dose independent | rect. | 20 | 15 |
| 605 | 97.80 | atmosphere | 1010 | 1440 | > th | dose independent | rect. | 22 | 20 |
| 675 | 97.85 | atmosphere | 1010 | 1440 | > th | dose independent | no | NA | NA |
| 732 | 97.89 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 814 | 97.98 | radiation | 10 | 1440 | < th | dose dependent | sin | 15 | NA |
| 830 | 98.02 | radiation | 1 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 842 | 98.04 | wind | 7 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 855 | 98.06 | radiation | 30 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 866 | 98.06 | radiation | 10 | 1440 | < th | dose dependent | sin | 20 | NA |
| 879 | 98.07 | radiation | 10 | 1440 | < th | dose dependent | rect. | 12 | 19 |
| 905 | 98.11 | radiation | 30 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 914 | 98.12 | humidity | 60 | 4320 | < th | dose dependent | rect. | 10 | 2 |
| 916 | 98.12 | wind | 3 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 920 | 98.13 | wind | 3 | 30 | < th | dose dependent | rect. | 21 | 20 |
| 964 | 98.20 | atmosphere | 1005 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 974 | 98.21 | radiation | 10 | 1440 | < th | dose dependent | rect. | 8 | 19 |
| 988 | 98.22 | radiation | 10 | 1440 | < th | dose dependent | rect. | 8 | 16 |
| 992 | 98.23 | radiation | 10 | 1440 | < th | dose dependent | rect. | 8 | 11 |