Os02g0518800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0518800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 215.38 | 0.69 | 4.85 | 0.531 | 0.132 | -1.22 | 1.17 | -2.55 | 0.132 | 10.7 | 22.41 | 2171 | -- | -- |
| 226.68 | 0.701 | 4.96 | -0.303 | 0.121 | -1.17 | 0.856 | -- | -0.144 | 10.8 | 23.5 | 2047 | -- | -- |
| 220.26 | 0.691 | 4.85 | 0.475 | 0.0863 | -1.22 | -- | -2.3 | 0.11 | 11.6 | 22.42 | 2004 | -- | -- |
| 229.31 | 0.705 | 4.94 | -0.328 | 0.052 | -1.25 | -- | -- | -0.15 | 12.1 | 24.03 | 1569 | -- | -- |
| 220.81 | 0.692 | 4.85 | 0.523 | -- | -1.19 | -- | -2.37 | 0.125 | -- | 22.5 | 1990 | -- | -- |
| 286.07 | 0.793 | 4.84 | 0.124 | 0.0193 | -- | 0.913 | -- | 0.355 | 10.5 | -- | -- | -- | -- |
| 289.11 | 0.796 | 4.84 | 0.164 | 0.0841 | -- | -- | -- | 0.36 | 16.1 | -- | -- | -- | -- |
| 229.5 | 0.706 | 4.95 | -0.34 | -- | -1.21 | -- | -- | -0.132 | -- | 24.06 | 1581 | -- | -- |
| 231.81 | 0.709 | 4.93 | -- | 0.0767 | -1.11 | -- | -- | -0.078 | 12.3 | 23.9 | 1510 | -- | -- |
| 289.5 | 0.795 | 4.84 | 0.16 | -- | -- | -- | -- | 0.357 | -- | -- | -- | -- | -- |
| 289.82 | 0.796 | 4.84 | -- | 0.0809 | -- | -- | -- | 0.341 | 16.1 | -- | -- | -- | -- |
| 232.25 | 0.71 | 4.93 | -- | -- | -1.1 | -- | -- | -0.0697 | -- | 23.94 | 1541 | -- | -- |
| 290.17 | 0.795 | 4.84 | -- | -- | -- | -- | -- | 0.339 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 214.11 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 4 |
| 3 | 214.26 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 6 | 214.69 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 7 |
| 15 | 215.89 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 14 |
| 22 | 216.15 | temperature | 20 | 1440 | > th | dose dependent | sin | 10 | NA |
| 47 | 216.75 | temperature | 20 | 4320 | > th | dose dependent | rect. | 22 | 1 |
| 55 | 216.90 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 21 |
| 61 | 217.00 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 5 |
| 68 | 217.13 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 7 |
| 88 | 217.38 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 5 |
| 121 | 217.63 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 154 | 217.79 | temperature | 10 | 720 | > th | dose dependent | rect. | 14 | 18 |
| 223 | 218.09 | temperature | 30 | 720 | < th | dose dependent | rect. | 8 | 22 |
| 231 | 218.14 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 317 | 218.54 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 20 |
| 389 | 218.84 | temperature | 25 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 434 | 219.05 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 477 | 219.28 | temperature | 25 | 720 | < th | dose dependent | rect. | 2 | 22 |
| 484 | 219.32 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 504 | 219.41 | temperature | 10 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 522 | 219.48 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 541 | 219.58 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 15 |
| 547 | 219.62 | temperature | 25 | 4320 | < th | dose dependent | sin | 12 | NA |
| 566 | 219.67 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 23 |
| 613 | 219.81 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 629 | 219.87 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 20 |
| 714 | 220.07 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 793 | 220.27 | temperature | 10 | 1440 | > th | dose dependent | sin | 13 | NA |
| 814 | 220.31 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 885 | 220.45 | temperature | 10 | 1440 | > th | dose dependent | sin | 8 | NA |