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Os02g0518000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : C2 calcium/lipid-binding region, CaLB domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.5 (0.0221) R2 : 0.645
β1 : 1.19 (0.0809) R2dD : 0.174 R2D : 0.143
β2 : 1.39 (0.0569) R2dC : 0.47 R2C : 0.47
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.213 (0.0472) R2dN8 : 0.0214 R2N8 : -0.00385
σ : 0.416
deviance : 78.8
__
_____
C
peak time of C : 7.49
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
72.44 0.4 10.5 1.09 1.69 0.654 -0.386 -0.844 0.229 7.49 80.75 675 -- --
73.05 0.398 10.5 1.12 1.7 0.615 -0.0917 -- 0.225 7.41 80.91 639 -- --
72.66 0.397 10.5 1.09 1.69 0.685 -- -0.641 0.232 7.43 79.11 638 -- --
73.04 0.398 10.5 1.13 1.7 0.62 -- -- 0.236 7.41 80.38 628 -- --
176.48 0.619 10.5 1.12 -- 0.443 -- 0.318 0.324 -- 66 4332 -- --
78.54 0.415 10.5 1.2 1.39 -- -0.307 -- 0.213 7.48 -- -- -- --
78.8 0.416 10.5 1.19 1.39 -- -- -- 0.213 7.49 -- -- -- --
176.51 0.619 10.5 1.16 -- 0.512 -- -- 0.359 -- 65.89 4322 -- --
105.23 0.478 10.5 -- 1.79 0.811 -- -- 0.13 7.42 79 672 -- --
182.49 0.631 10.5 1.21 -- -- -- -- 0.235 -- -- -- -- --
116.03 0.504 10.5 -- 1.4 -- -- -- 0.0811 7.43 -- -- -- --
203.97 0.665 10.5 -- -- 0.967 -- -- 0.228 -- 53.76 4298 -- --
221.1 0.694 10.6 -- -- -- -- -- 0.101 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 70.37 humidity 70 14400 > th dose dependent rect. 3 3
3 70.40 humidity 70 14400 > th dose dependent rect. 4 1
7 70.55 humidity 50 90 > th dose dependent rect. 13 15
11 71.04 temperature 30 90 < th dose independent rect. 13 15
23 71.48 radiation 1 43200 < th dose dependent rect. 19 6
25 71.62 humidity 90 720 < th dose dependent rect. 11 2
31 71.74 humidity 80 720 < th dose dependent rect. 18 21
34 71.81 radiation 30 720 < th dose independent rect. 14 19
39 71.83 humidity 60 270 > th dose independent rect. 21 20
40 71.86 atmosphere 1010 10 < th dose independent rect. 8 10
50 71.94 humidity 90 14400 < th dose dependent rect. 23 7
51 71.95 wind 1 14400 > th dose independent rect. 1 1
63 72.01 wind 1 14400 < th dose independent rect. 5 1
64 72.01 humidity 60 90 > th dose independent rect. 13 15
65 72.02 radiation 40 720 < th dose independent rect. 13 21
68 72.03 humidity 70 720 > th dose independent rect. 6 12
71 72.04 humidity 80 720 < th dose dependent rect. 6 9
72 72.05 humidity 80 720 < th dose dependent sin 3 NA
77 72.06 radiation 30 720 < th dose independent rect. 14 11
80 72.07 wind 3 14400 < th dose dependent rect. 24 5
87 72.09 wind 9 43200 > th dose independent rect. 10 4
89 72.09 wind 1 43200 < th dose dependent rect. 8 5
103 72.12 wind 3 14400 < th dose dependent rect. 3 3
112 72.13 radiation 40 720 < th dose dependent rect. 15 10
116 72.16 humidity 90 14400 < th dose dependent rect. 2 4
120 72.18 humidity 50 30 > th dose dependent rect. 8 21
125 72.20 humidity 50 270 > th dose independent rect. 6 11
129 72.21 radiation 20 30 < th dose dependent rect. 8 9
135 72.24 humidity 80 720 < th dose dependent rect. 9 6
136 72.25 humidity 80 14400 > th dose independent rect. 23 1
141 72.26 humidity 80 14400 < th dose independent rect. 22 2
143 72.26 radiation 20 30 < th dose independent rect. 8 21
152 72.28 wind 3 14400 < th dose independent rect. 3 1
164 72.30 wind 1 14400 < th dose independent rect. 1 1
168 72.31 wind 9 43200 < th dose independent rect. 10 4
198 72.37 humidity 90 14400 < th dose dependent rect. 3 1
204 72.38 radiation 40 720 < th dose independent rect. 13 5
209 72.39 wind 1 14400 > th dose independent rect. 5 1
221 72.41 wind 3 14400 < th dose dependent rect. 24 1
223 72.41 humidity 50 720 > th dose dependent rect. 6 12
225 72.42 humidity 50 10 > th dose independent rect. 8 10
248 72.46 wind 3 14400 > th dose independent rect. 3 1
257 72.50 humidity 70 720 > th dose independent rect. 6 19
279 72.56 wind 3 14400 < th dose independent rect. 20 9
280 72.56 radiation 20 10 < th dose independent rect. 8 9
286 72.56 humidity 80 720 < th dose dependent rect. 2 20
293 72.57 humidity 80 720 < th dose dependent rect. 6 16
299 72.57 humidity 80 720 < th dose dependent rect. 9 23
304 72.58 humidity 80 720 < th dose dependent rect. 14 23
328 72.60 humidity 80 720 < th dose dependent no NA NA
354 72.61 humidity 80 14400 < th dose dependent rect. 6 1
358 72.61 temperature 30 90 < th dose dependent rect. 4 9
364 72.62 radiation 40 720 < th dose independent rect. 22 20
387 72.64 humidity 80 720 < th dose independent rect. 11 2
403 72.65 wind 5 14400 < th dose dependent rect. 24 13
426 72.67 wind 3 14400 > th dose independent rect. 20 9
445 72.69 wind 9 43200 > th dose independent rect. 13 1
446 72.69 wind 1 14400 > th dose independent rect. 24 6
447 72.69 humidity 80 14400 > th dose independent rect. 22 9
449 72.69 wind 9 43200 > th dose dependent rect. 12 3
455 72.69 humidity 90 720 < th dose dependent rect. 9 12
473 72.71 wind 1 43200 > th dose independent rect. 8 5
481 72.72 wind 1 43200 < th dose independent rect. 8 5
483 72.72 wind 3 14400 < th dose independent rect. 24 5
495 72.73 wind 9 43200 > th dose independent rect. 13 3
499 72.73 wind 5 14400 < th dose dependent rect. 2 11
506 72.73 wind 9 14400 < th dose dependent rect. 20 18
511 72.74 wind 1 14400 > th dose dependent rect. 24 14
514 72.74 wind 1 14400 > th dose dependent rect. 20 18
531 72.76 radiation 20 10 < th dose dependent rect. 8 21
563 72.80 wind 9 43200 > th dose independent rect. 9 7
578 72.80 humidity 80 720 < th dose dependent rect. 9 18
584 72.81 wind 1 14400 > th dose independent rect. 2 12
590 72.81 wind 1 14400 > th dose dependent rect. 20 10
591 72.81 wind 9 14400 < th dose dependent rect. 20 10
603 72.82 wind 9 43200 < th dose independent rect. 13 1
604 72.82 humidity 80 1440 > th dose independent rect. 11 1
605 72.82 radiation 30 43200 < th dose independent rect. 11 1
606 72.82 wind 9 43200 < th dose independent rect. 13 3
612 72.82 radiation 30 43200 > th dose dependent rect. 11 1
622 72.82 humidity 50 720 > th dose dependent rect. 6 19
628 72.83 radiation 40 720 < th dose independent rect. 6 12
639 72.84 radiation 40 43200 > th dose independent rect. 11 1
647 72.84 wind 3 14400 < th dose dependent rect. 24 10
655 72.85 temperature 15 270 > th dose independent rect. 6 11
699 72.88 humidity 50 1440 > th dose dependent rect. 11 1
711 72.89 wind 1 14400 > th dose independent rect. 24 13
724 72.90 humidity 80 14400 < th dose independent rect. 22 9
726 72.90 humidity 70 10 > th dose independent rect. 13 16
741 72.91 wind 1 14400 > th dose independent rect. 24 10
765 72.92 humidity 70 1440 > th dose independent rect. 9 1
766 72.92 wind 1 14400 < th dose independent rect. 8 2
770 72.92 radiation 1 30 < th dose independent rect. 23 19
771 72.92 wind 7 14400 < th dose dependent sin 6 NA
787 72.93 wind 1 14400 > th dose independent rect. 8 2
811 72.94 wind 9 43200 > th dose dependent rect. 10 6
829 72.95 wind 1 14400 > th dose dependent sin 6 NA
872 72.97 humidity 70 720 > th dose independent rect. 13 21
895 72.98 wind 9 43200 < th dose independent rect. 9 7
898 72.98 atmosphere 1010 30 < th dose independent rect. 8 21
912 72.98 wind 1 43200 < th dose dependent rect. 18 10
919 72.99 humidity 70 1440 < th dose independent rect. 6 5
937 72.99 wind 1 14400 > th dose dependent rect. 3 1
946 73.00 humidity 80 1440 > th dose independent rect. 7 3
956 73.00 humidity 90 270 < th dose dependent rect. 17 5
964 73.01 humidity 70 1440 < th dose independent rect. 9 1
993 73.02 wind 1 14400 > th dose independent rect. 3 7
996 73.02 humidity 70 1440 > th dose independent rect. 2 9