Os02g0513000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Receptor protein kinase-like protein.
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Os02g0513000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Receptor protein kinase-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 79.88 | 0.42 | 9.64 | -0.387 | 0.62 | -0.222 | -0.604 | -2.66 | -0.375 | 6.56 | 0.1109 | 3963 | -- | -- |
| 82.73 | 0.424 | 9.6 | -0.283 | 0.605 | -0.74 | -0.744 | -- | -0.403 | 6.59 | 0.4907 | 16637 | -- | -- |
| 80.77 | 0.419 | 9.64 | -0.389 | 0.623 | -0.236 | -- | -2.65 | -0.375 | 6.45 | 0.1025 | 3962 | -- | -- |
| 83.97 | 0.427 | 9.6 | -0.3 | 0.6 | -0.754 | -- | -- | -0.409 | 6.52 | 0.4882 | 16641 | -- | -- |
| 100.65 | 0.467 | 9.65 | -0.398 | -- | -0.198 | -- | -2.6 | -0.354 | -- | 0.2063 | 3962 | -- | -- |
| 94.73 | 0.456 | 9.58 | -0.577 | 0.604 | -- | -0.731 | -- | -0.334 | 6.63 | -- | -- | -- | -- |
| 96.06 | 0.459 | 9.58 | -0.589 | 0.602 | -- | -- | -- | -0.332 | 6.52 | -- | -- | -- | -- |
| 102.73 | 0.472 | 9.61 | -0.294 | -- | -0.735 | -- | -- | -0.413 | -- | 0.4885 | 16793 | -- | -- |
| 85.61 | 0.431 | 9.6 | -- | 0.608 | -0.766 | -- | -- | -0.412 | 6.52 | 0.5072 | 21492 | -- | -- |
| 114.92 | 0.501 | 9.59 | -0.574 | -- | -- | -- | -- | -0.32 | -- | -- | -- | -- | -- |
| 105.2 | 0.48 | 9.57 | -- | 0.595 | -- | -- | -- | -0.266 | 6.58 | -- | -- | -- | -- |
| 103.3 | 0.473 | 9.61 | -- | -- | -0.817 | -- | -- | -0.394 | -- | 0.6769 | 21996 | -- | -- |
| 123.61 | 0.519 | 9.58 | -- | -- | -- | -- | -- | -0.256 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 78.78 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 2 | 79.02 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 14 |
| 3 | 79.27 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 6 | 79.44 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 3 | NA |
| 9 | 79.61 | wind | 1.0 | 14400 | > th | dose independent | rect. | 24 | 5 |
| 11 | 79.67 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 11 |
| 12 | 79.69 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 13 | 79.71 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 14 |
| 16 | 79.79 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 14 |
| 17 | 79.79 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 14 |
| 18 | 79.83 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 19 | 79.92 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 2 | NA |
| 22 | 80.00 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 2 | NA |
| 23 | 80.00 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 2 | NA |
| 27 | 80.04 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 18 |
| 29 | 80.08 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 18 |
| 31 | 80.08 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 18 |
| 32 | 80.12 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 19 |
| 33 | 80.13 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 23 |
| 35 | 80.14 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 21 |
| 38 | 80.17 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 6 | 11 |
| 57 | 80.26 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 23 | 23 |
| 59 | 80.27 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 69 | 80.31 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 21 | 23 |
| 74 | 80.34 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 5 |
| 78 | 80.35 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 12 | 23 |
| 83 | 80.37 | precipitation | 0.1 | 4320 | > th | dose dependent | no | NA | NA |
| 87 | 80.38 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 9 | 23 |
| 99 | 80.42 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 12 | 5 |
| 103 | 80.43 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 7 | 23 |
| 104 | 80.43 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 15 | 23 |
| 127 | 80.50 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 157 | 80.58 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 20 | 9 |
| 178 | 80.64 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 11 |
| 181 | 80.64 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 11 |
| 184 | 80.65 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 11 |
| 209 | 80.72 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 210 | 80.72 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 6 |
| 217 | 80.76 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 20 | 9 |
| 224 | 80.80 | wind | 1.0 | 1440 | < th | dose independent | rect. | 13 | 6 |
| 225 | 80.80 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 23 |
| 228 | 80.80 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 23 |
| 229 | 80.81 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 23 |
| 237 | 80.84 | wind | 1.0 | 1440 | < th | dose independent | rect. | 13 | 2 |
| 261 | 80.94 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 1 |
| 262 | 80.95 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 263 | 80.95 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 282 | 81.02 | wind | 1.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 283 | 81.02 | wind | 3.0 | 14400 | < th | dose independent | rect. | 21 | 4 |
| 284 | 81.02 | wind | 1.0 | 1440 | > th | dose independent | rect. | 12 | 7 |
| 310 | 81.08 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 312 | 81.08 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 316 | 81.09 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 17 |
| 335 | 81.14 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 1 |
| 337 | 81.14 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 12 | 22 |
| 340 | 81.14 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 12 | 22 |
| 346 | 81.17 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 351 | 81.18 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 12 | 22 |
| 352 | 81.18 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 7 |
| 367 | 81.22 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 12 | NA |
| 369 | 81.23 | precipitation | 0.1 | 4320 | > th | dose independent | no | NA | NA |
| 370 | 81.23 | precipitation | 0.1 | 4320 | < th | dose independent | no | NA | NA |
| 371 | 81.23 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 6 | 11 |
| 375 | 81.23 | precipitation | 0.1 | 4320 | < th | dose dependent | no | NA | NA |
| 393 | 81.25 | wind | 3.0 | 14400 | > th | dose independent | rect. | 21 | 4 |
| 394 | 81.25 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 9 | 23 |
| 402 | 81.27 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 12 | 5 |
| 411 | 81.27 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 9 | 23 |
| 412 | 81.27 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 15 | 23 |
| 417 | 81.27 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 9 | 23 |
| 418 | 81.27 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 15 | 23 |
| 424 | 81.29 | wind | 1.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 427 | 81.29 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 15 | 23 |
| 432 | 81.30 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 7 | 23 |
| 452 | 81.33 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 7 | 23 |
| 454 | 81.33 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 6 |
| 456 | 81.33 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 7 | 23 |
| 474 | 81.37 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 4 |
| 480 | 81.37 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 4 |
| 486 | 81.38 | wind | 1.0 | 1440 | < th | dose independent | rect. | 10 | 9 |
| 498 | 81.41 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 6 |
| 503 | 81.41 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 6 |
| 507 | 81.42 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 12 | 5 |
| 511 | 81.42 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 12 | 5 |
| 520 | 81.43 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 4 |
| 576 | 81.52 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 2 |
| 582 | 81.52 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 2 |
| 589 | 81.53 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 4 |
| 604 | 81.54 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 18 | 23 |
| 605 | 81.54 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 18 | 23 |
| 609 | 81.54 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 18 | 23 |
| 662 | 81.62 | wind | 1.0 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 687 | 81.64 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 6 |
| 704 | 81.66 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 12 | 8 |
| 747 | 81.71 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 12 | 8 |
| 752 | 81.71 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 12 | 8 |
| 867 | 81.85 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 12 | 8 |
| 902 | 81.91 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 8 |
| 916 | 81.92 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 9 | 12 |
| 951 | 81.96 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 21 | 4 |
| 997 | 82.01 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 19 | 1 |