Os02g0511400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glucose/ribitol dehydrogenase family protein.
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Os02g0511400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glucose/ribitol dehydrogenase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 258.67 | 0.756 | 4.54 | 1.09 | 0.535 | -2.04 | -0.0357 | -2.18 | 0.412 | 22.3 | 29.5 | 14 | -- | -- |
| 264.97 | 0.764 | 4.59 | 0.71 | 0.538 | -2.01 | -0.596 | -- | 0.321 | 22.3 | 29.5 | 14 | -- | -- |
| 258.6 | 0.749 | 4.54 | 1.09 | 0.532 | -2.03 | -- | -2.23 | 0.412 | 22.3 | 29.37 | 14 | -- | -- |
| 265.52 | 0.759 | 4.58 | 0.726 | 0.529 | -2.03 | -- | -- | 0.322 | 22.2 | 29.82 | 14 | -- | -- |
| 263.38 | 0.756 | 4.54 | 1 | -- | -2.08 | -- | -1.62 | 0.425 | -- | 30.73 | 311 | -- | -- |
| 319.98 | 0.839 | 4.49 | 1.21 | 0.621 | -- | 0.75 | -- | 0.721 | 17.1 | -- | -- | -- | -- |
| 321.22 | 0.839 | 4.49 | 1.21 | 0.631 | -- | -- | -- | 0.724 | 17.4 | -- | -- | -- | -- |
| 264.85 | 0.758 | 4.56 | 0.717 | -- | -2.23 | -- | -- | 0.382 | -- | 33.09 | 334 | -- | -- |
| 277.91 | 0.776 | 4.61 | -- | 0.583 | -2.33 | -- | -- | 0.19 | 22.9 | 29.7 | 21 | -- | -- |
| 341.99 | 0.864 | 4.48 | 1.19 | -- | -- | -- | -- | 0.708 | -- | -- | -- | -- | -- |
| 360.09 | 0.888 | 4.52 | -- | 0.611 | -- | -- | -- | 0.589 | 17.5 | -- | -- | -- | -- |
| 277.27 | 0.776 | 4.59 | -- | -- | -2.43 | -- | -- | 0.256 | -- | 32.23 | 334 | -- | -- |
| 379.53 | 0.909 | 4.51 | -- | -- | -- | -- | -- | 0.576 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 246.01 | temperature | 10 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 6 | 251.79 | radiation | 20 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 9 | 253.35 | radiation | 20 | 43200 | < th | dose independent | rect. | 24 | 8 |
| 10 | 253.37 | radiation | 20 | 43200 | < th | dose independent | rect. | 2 | 6 |
| 12 | 253.39 | radiation | 20 | 43200 | < th | dose independent | rect. | 22 | 10 |
| 13 | 253.40 | radiation | 20 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 16 | 253.40 | radiation | 20 | 43200 | < th | dose independent | rect. | 20 | 12 |
| 21 | 254.25 | radiation | 20 | 43200 | < th | dose independent | rect. | 17 | 16 |
| 37 | 254.88 | radiation | 20 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 39 | 254.98 | temperature | 20 | 90 | > th | dose dependent | rect. | 10 | 23 |
| 60 | 255.65 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 83 | 255.67 | radiation | 20 | 43200 | > th | dose independent | rect. | 17 | 15 |
| 86 | 255.72 | radiation | 20 | 43200 | > th | dose independent | rect. | 6 | 2 |
| 127 | 256.07 | radiation | 40 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 144 | 256.35 | temperature | 20 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 148 | 256.42 | radiation | 10 | 43200 | < th | dose independent | sin | 9 | NA |
| 150 | 256.47 | radiation | 20 | 43200 | < th | dose independent | sin | 11 | NA |
| 153 | 256.58 | temperature | 30 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 170 | 256.85 | radiation | 40 | 43200 | < th | dose dependent | rect. | 24 | 8 |
| 174 | 256.88 | radiation | 40 | 43200 | < th | dose dependent | rect. | 22 | 10 |
| 176 | 256.89 | radiation | 40 | 43200 | < th | dose dependent | rect. | 20 | 12 |
| 179 | 256.90 | radiation | 40 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 193 | 257.13 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 209 | 257.31 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 212 | 257.41 | temperature | 25 | 1440 | > th | dose independent | rect. | 10 | 2 |
| 271 | 257.83 | radiation | 40 | 43200 | < th | dose independent | rect. | 24 | 10 |
| 277 | 257.86 | radiation | 40 | 43200 | < th | dose independent | rect. | 6 | 4 |
| 278 | 257.86 | radiation | 40 | 43200 | < th | dose independent | rect. | 22 | 12 |
| 280 | 257.87 | radiation | 40 | 43200 | < th | dose independent | rect. | 4 | 6 |
| 285 | 257.87 | radiation | 40 | 43200 | < th | dose independent | rect. | 16 | 18 |
| 291 | 257.89 | temperature | 25 | 1440 | < th | dose independent | rect. | 10 | 2 |
| 318 | 258.08 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 348 | 258.24 | temperature | 20 | 270 | > th | dose dependent | rect. | 8 | 23 |
| 363 | 258.34 | radiation | 40 | 43200 | > th | dose dependent | rect. | 14 | 20 |
| 387 | 258.50 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 392 | 258.59 | temperature | 20 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 399 | 258.68 | radiation | 40 | 43200 | > th | dose dependent | rect. | 7 | 3 |
| 488 | 259.07 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 493 | 259.10 | temperature | 25 | 1440 | > th | dose independent | rect. | 10 | 12 |
| 494 | 259.10 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 516 | 259.14 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 569 | 259.31 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 583 | 259.35 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 638 | 259.48 | radiation | 20 | 43200 | < th | dose independent | rect. | 14 | 4 |
| 640 | 259.48 | radiation | 20 | 43200 | < th | dose independent | rect. | 14 | 15 |
| 648 | 259.49 | radiation | 20 | 43200 | < th | dose independent | rect. | 14 | 13 |
| 658 | 259.51 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 706 | 259.59 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 746 | 259.79 | temperature | 15 | 270 | > th | dose dependent | rect. | 10 | 15 |
| 749 | 259.81 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 750 | 259.82 | temperature | 25 | 1440 | < th | dose independent | rect. | 10 | 12 |
| 751 | 259.82 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 756 | 259.87 | temperature | 30 | 10 | < th | dose dependent | sin | 19 | NA |
| 759 | 259.90 | radiation | 40 | 43200 | < th | dose independent | sin | 11 | NA |
| 772 | 260.05 | radiation | 40 | 43200 | > th | dose dependent | sin | 11 | NA |
| 835 | 260.29 | temperature | 25 | 1440 | < th | dose independent | rect. | 5 | 17 |
| 875 | 260.46 | temperature | 25 | 1440 | > th | dose independent | rect. | 6 | 16 |
| 913 | 260.59 | temperature | 20 | 270 | > th | dose dependent | rect. | 5 | 23 |
| 922 | 260.63 | radiation | 20 | 43200 | > th | dose dependent | sin | 11 | NA |
| 940 | 260.75 | temperature | 20 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 979 | 260.91 | temperature | 20 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 981 | 260.92 | radiation | 40 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 989 | 260.95 | temperature | 20 | 270 | > th | dose dependent | rect. | 3 | 23 |