Os02g0509600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0509600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 68.58 | 0.389 | 3.38 | 0.343 | 0.349 | 0.326 | -0.197 | 1.51 | -0.0826 | 7.3 | 79.03 | 4883 | -- | -- |
| 70.48 | 0.391 | 3.38 | 0.23 | 0.311 | 0.332 | -0.371 | -- | -0.133 | 7.23 | 86.02 | 7303 | -- | -- |
| 68.66 | 0.386 | 3.38 | 0.348 | 0.348 | 0.322 | -- | 1.58 | -0.0786 | 7.42 | 79.19 | 4897 | -- | -- |
| 70.83 | 0.392 | 3.38 | 0.217 | 0.306 | 0.334 | -- | -- | -0.138 | 7.5 | 86 | 7291 | -- | -- |
| 73.62 | 0.4 | 3.38 | 0.382 | -- | 0.217 | -- | 1.55 | -0.0369 | -- | 81 | 5845 | -- | -- |
| 72.51 | 0.399 | 3.35 | 0.161 | 0.304 | -- | -0.375 | -- | -0.00532 | 7.26 | -- | -- | -- | -- |
| 72.86 | 0.4 | 3.35 | 0.154 | 0.302 | -- | -- | -- | -0.00409 | 7.54 | -- | -- | -- | -- |
| 75.75 | 0.405 | 3.39 | 0.224 | -- | 0.331 | -- | -- | -0.136 | -- | 86.09 | 7216 | -- | -- |
| 71.94 | 0.395 | 3.38 | -- | 0.307 | 0.274 | -- | -- | -0.145 | 7.46 | 85.26 | 7294 | -- | -- |
| 77.76 | 0.412 | 3.36 | 0.159 | -- | -- | -- | -- | 0.000588 | -- | -- | -- | -- | -- |
| 73.49 | 0.401 | 3.35 | -- | 0.304 | -- | -- | -- | -0.0213 | 7.51 | -- | -- | -- | -- |
| 76.92 | 0.408 | 3.39 | -- | -- | 0.268 | -- | -- | -0.14 | -- | 85.28 | 7207 | -- | -- |
| 78.42 | 0.413 | 3.36 | -- | -- | -- | -- | -- | -0.017 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 61.19 | humidity | 80.0 | 10 | < th | dose independent | rect. | 6 | 2 |
| 3 | 61.53 | radiation | 10.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 6 | 61.68 | humidity | 80.0 | 10 | < th | dose independent | rect. | 23 | 9 |
| 26 | 63.30 | temperature | 25.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 36 | 63.70 | radiation | 10.0 | 10 | > th | dose independent | rect. | 16 | 16 |
| 57 | 66.87 | radiation | 10.0 | 10 | > th | dose independent | sin | 11 | NA |
| 58 | 66.95 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 59 | 67.00 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 2 | 2 |
| 60 | 67.01 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 61 | 67.10 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 65 | 67.14 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 67 | 67.16 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 1 | 7 |
| 72 | 67.25 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 74 | 67.26 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 87 | 67.73 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 7 | 7 |
| 88 | 67.73 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 6 | 8 |
| 97 | 67.76 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 98 | 67.76 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 4 | 5 |
| 112 | 67.79 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 11 | 1 |
| 114 | 67.79 | humidity | 70.0 | 4320 | > th | dose dependent | rect. | 3 | 11 |
| 117 | 67.80 | wind | 5.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 125 | 67.82 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 7 | 2 |
| 126 | 67.83 | temperature | 25.0 | 90 | > th | dose independent | rect. | 1 | 1 |
| 135 | 67.84 | humidity | 70.0 | 4320 | > th | dose dependent | rect. | 7 | 8 |
| 142 | 67.88 | wind | 7.0 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 144 | 67.88 | humidity | 70.0 | 4320 | > th | dose dependent | rect. | 8 | 6 |
| 148 | 67.89 | wind | 3.0 | 30 | < th | dose independent | rect. | 7 | 1 |
| 151 | 67.89 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 2 |
| 153 | 67.90 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 8 | 23 |
| 197 | 67.99 | humidity | 70.0 | 4320 | > th | dose dependent | rect. | 10 | 3 |
| 212 | 68.02 | humidity | 80.0 | 4320 | < th | dose independent | sin | 3 | NA |
| 213 | 68.02 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 224 | 68.03 | humidity | 80.0 | 4320 | > th | dose independent | sin | 3 | NA |
| 236 | 68.04 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 237 | 68.04 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 240 | 68.04 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 244 | 68.04 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 253 | 68.04 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 254 | 68.04 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 276 | 68.04 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 313 | 68.07 | humidity | 70.0 | 4320 | > th | dose dependent | sin | 3 | NA |
| 365 | 68.12 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 369 | 68.12 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 3 | 9 |
| 372 | 68.12 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 23 | 15 |
| 378 | 68.13 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 391 | 68.13 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 23 | 13 |
| 395 | 68.14 | wind | 5.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 405 | 68.15 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 407 | 68.15 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 408 | 68.15 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 412 | 68.15 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 414 | 68.15 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 419 | 68.15 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 423 | 68.15 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 425 | 68.15 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 430 | 68.15 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 435 | 68.16 | humidity | 90.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 440 | 68.16 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 482 | 68.19 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 498 | 68.20 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 521 | 68.22 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 523 | 68.22 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 532 | 68.23 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 8 | 3 |
| 536 | 68.23 | humidity | 90.0 | 4320 | < th | dose dependent | sin | 5 | NA |
| 565 | 68.25 | humidity | 80.0 | 10 | < th | dose independent | rect. | 20 | 12 |
| 597 | 68.27 | radiation | 10.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 635 | 68.30 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 24 | 9 |
| 676 | 68.32 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 678 | 68.32 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 684 | 68.32 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 723 | 68.35 | humidity | 80.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 750 | 68.37 | wind | 7.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 770 | 68.38 | wind | 1.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 930 | 68.44 | wind | 1.0 | 4320 | > th | dose dependent | rect. | 5 | 2 |
| 962 | 68.46 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |