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Os02g0509500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.1 (0.0215) R2 : 0.876
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.88 (0.0512) R2dC : 0.863 R2C : 0.858
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.324 (0.0452) R2dN8 : 0.018 R2N8 : 0.0133
σ : 0.405
deviance : 75.13
__
_____
C
peak time of C : 23.6
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
57.26 0.356 10.1 0.606 2.18 0.695 -0.583 0.459 0.434 23.4 20.57 30 -- --
57.4 0.353 10.1 0.611 2.16 0.703 -0.14 -- 0.432 23.4 19.81 24 -- --
57.89 0.354 10.1 0.683 2.15 0.706 -- 0.178 0.459 23.4 20 30 -- --
57.48 0.353 10.1 0.616 2.16 0.702 -- -- 0.432 23.4 19.81 24 -- --
103.51 0.474 10.1 0.567 -- 2.24 -- -0.291 0.459 -- 10.14 9 -- --
65.67 0.38 10.1 0.596 2.88 -- -0.0635 -- 0.39 23.6 -- -- -- --
65.69 0.38 10.1 0.598 2.88 -- -- -- 0.39 23.6 -- -- -- --
103.62 0.474 10.1 0.568 -- 2.24 -- -- 0.49 -- 10.39 12 -- --
66.86 0.381 10.1 -- 2.09 0.718 -- -- 0.393 23.4 10.16 32 -- --
585.23 1.13 10.1 0.678 -- -- -- -- 0.423 -- -- -- -- --
75.13 0.405 10.1 -- 2.88 -- -- -- 0.324 23.6 -- -- -- --
112.01 0.493 10.1 -- -- 2.24 -- -- 0.431 -- 10.04 12 -- --
597.35 1.14 10.1 -- -- -- -- -- 0.348 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 43.68 temperature 10.0 90 > th dose dependent rect. 15 14
2 44.14 temperature 10.0 10 > th dose dependent rect. 15 15
8 44.89 temperature 10.0 270 > th dose dependent rect. 13 15
12 45.58 temperature 20.0 30 > th dose independent rect. 15 15
14 45.83 temperature 30.0 90 < th dose dependent rect. 19 7
17 46.12 temperature 30.0 10 < th dose dependent rect. 19 7
32 46.69 atmosphere 1010.0 10 < th dose independent rect. 15 15
37 46.77 radiation 1.0 90 > th dose independent rect. 4 11
56 47.09 radiation 1.0 270 < th dose independent rect. 24 8
57 47.14 radiation 10.0 270 < th dose dependent rect. 24 14
59 47.23 radiation 1.0 270 < th dose independent rect. 24 15
73 47.31 radiation 1.0 270 < th dose dependent rect. 24 8
107 47.76 atmosphere 1000.0 90 > th dose independent rect. 2 17
122 47.95 radiation 10.0 30 < th dose dependent rect. 2 12
129 48.02 radiation 10.0 30 < th dose dependent rect. 2 7
138 48.12 radiation 10.0 30 < th dose dependent sin 3 NA
139 48.14 temperature 30.0 270 < th dose dependent rect. 21 2
166 48.36 radiation 1.0 90 < th dose independent sin 2 NA
176 48.45 radiation 1.0 90 > th dose independent sin 2 NA
182 48.51 atmosphere 1000.0 270 > th dose independent rect. 24 18
190 48.55 temperature 15.0 270 > th dose independent rect. 24 5
191 48.55 atmosphere 1010.0 270 < th dose independent rect. 24 5
197 48.57 wind 9.0 270 < th dose independent rect. 24 5
199 48.57 temperature 30.0 270 < th dose independent rect. 24 5
200 48.57 humidity 50.0 270 > th dose independent rect. 24 5
203 48.57 atmosphere 995.0 270 > th dose independent rect. 24 5
207 48.57 temperature 10.0 270 > th dose independent rect. 5 19
217 48.60 precipitation 0.1 270 < th dose independent rect. 5 19
219 48.60 precipitation 0.1 270 < th dose dependent rect. 5 19
220 48.61 radiation 1.0 90 < th dose independent rect. 2 15
226 48.69 wind 9.0 270 < th dose independent rect. 5 19
239 48.79 radiation 40.0 10 < th dose dependent rect. 14 16
240 48.81 radiation 1.0 90 < th dose independent rect. 2 6
243 48.81 radiation 1.0 90 < th dose independent rect. 2 10
258 48.90 temperature 10.0 270 > th dose dependent rect. 24 5
275 49.03 temperature 10.0 10 > th dose dependent rect. 6 9
283 49.06 temperature 15.0 270 > th dose independent rect. 24 17
288 49.07 atmosphere 1015.0 1440 < th dose independent rect. 3 4
294 49.10 radiation 10.0 270 < th dose dependent rect. 17 7
302 49.13 precipitation 0.1 270 < th dose independent rect. 24 5
303 49.13 precipitation 0.1 270 < th dose dependent rect. 24 5
309 49.15 atmosphere 995.0 270 > th dose dependent rect. 24 5
326 49.22 radiation 20.0 10 < th dose dependent rect. 2 4
333 49.24 precipitation 0.1 10 < th dose independent rect. 6 9
334 49.24 radiation 40.0 10 < th dose independent rect. 15 15
338 49.24 precipitation 0.1 10 < th dose dependent rect. 6 9
342 49.25 atmosphere 995.0 30 > th dose dependent rect. 2 4
343 49.26 humidity 50.0 270 > th dose independent rect. 17 7
360 49.28 radiation 10.0 270 < th dose independent rect. 17 7
362 49.28 atmosphere 995.0 10 > th dose independent rect. 15 15
372 49.31 temperature 10.0 10 > th dose independent rect. 6 9
374 49.31 atmosphere 995.0 10 > th dose independent rect. 6 9
375 49.31 atmosphere 1015.0 10 < th dose independent rect. 6 9
378 49.31 wind 9.0 270 < th dose dependent rect. 24 5
383 49.33 precipitation 0.1 270 < th dose independent rect. 4 10
387 49.33 precipitation 0.1 270 < th dose dependent rect. 4 10
393 49.36 radiation 1.0 90 < th dose independent rect. 2 17
411 49.41 wind 9.0 270 < th dose independent rect. 17 7
439 49.43 humidity 50.0 270 > th dose dependent rect. 24 5
441 49.44 atmosphere 1000.0 10 > th dose independent rect. 2 4
443 49.44 atmosphere 1015.0 270 < th dose independent rect. 24 17
446 49.45 temperature 10.0 270 > th dose independent rect. 17 7
471 49.50 temperature 10.0 1440 > th dose independent rect. 7 9
474 49.50 temperature 10.0 1440 > th dose independent rect. 16 15
503 49.54 wind 9.0 30 < th dose independent rect. 15 15
511 49.55 wind 9.0 270 < th dose independent rect. 24 17
552 49.65 atmosphere 1000.0 270 > th dose independent rect. 1 3
555 49.66 atmosphere 995.0 270 > th dose independent rect. 18 6
562 49.67 precipitation 0.1 270 < th dose independent rect. 17 7
563 49.67 precipitation 0.1 270 < th dose dependent rect. 17 7
578 49.70 precipitation 0.1 270 < th dose independent rect. 4 21
579 49.70 temperature 10.0 270 > th dose dependent rect. 1 2
584 49.70 precipitation 0.1 270 < th dose dependent rect. 4 21
591 49.74 temperature 10.0 270 > th dose independent rect. 4 10
592 49.74 atmosphere 995.0 270 > th dose independent rect. 4 10
593 49.74 atmosphere 1015.0 270 < th dose independent rect. 4 10
596 49.75 wind 9.0 10 < th dose independent rect. 2 4
597 49.75 temperature 10.0 10 > th dose independent rect. 2 4
599 49.75 temperature 30.0 10 < th dose independent rect. 2 4
600 49.75 humidity 50.0 10 > th dose independent rect. 2 4
604 49.75 atmosphere 1010.0 10 < th dose independent rect. 2 4
606 49.75 radiation 20.0 10 < th dose independent rect. 2 4
611 49.75 temperature 10.0 10 > th dose independent rect. 6 20
612 49.76 wind 9.0 270 < th dose independent rect. 1 3
613 49.76 temperature 10.0 270 > th dose independent rect. 1 3
615 49.76 temperature 30.0 270 < th dose independent rect. 1 3
616 49.76 humidity 50.0 270 > th dose independent rect. 1 3
620 49.76 atmosphere 1010.0 270 < th dose independent rect. 1 3
627 49.76 wind 9.0 30 < th dose independent rect. 6 9
628 49.76 temperature 10.0 270 > th dose independent rect. 4 21
629 49.76 radiation 1.0 270 < th dose dependent rect. 1 3
655 49.81 temperature 30.0 270 < th dose independent rect. 19 5
743 49.90 wind 9.0 270 < th dose independent rect. 4 21
751 49.91 wind 9.0 1440 < th dose independent rect. 3 4
752 49.91 temperature 10.0 1440 > th dose independent rect. 3 4
755 49.91 temperature 30.0 1440 < th dose independent rect. 3 4
759 49.91 humidity 50.0 1440 > th dose independent rect. 3 4
764 49.91 atmosphere 995.0 1440 > th dose independent rect. 3 4
765 49.91 radiation 40.0 1440 < th dose independent rect. 3 4
771 49.91 temperature 10.0 1440 > th dose independent rect. 7 20
776 49.92 atmosphere 995.0 270 > th dose dependent rect. 1 3
777 49.92 temperature 10.0 10 > th dose dependent rect. 2 4
780 49.93 wind 9.0 10 < th dose independent rect. 6 20
785 49.94 precipitation 0.1 10 < th dose independent rect. 15 15
789 49.94 precipitation 0.1 10 < th dose dependent rect. 15 15
802 49.97 wind 1.0 10 > th dose independent rect. 6 9
810 50.00 wind 9.0 270 < th dose independent rect. 14 14
815 50.01 wind 9.0 270 < th dose independent rect. 5 9
898 50.15 wind 9.0 270 < th dose dependent rect. 1 3
915 50.19 humidity 50.0 10 > th dose dependent rect. 2 4
931 50.23 precipitation 0.1 30 < th dose independent rect. 2 4
934 50.23 precipitation 0.1 30 < th dose dependent rect. 2 4
952 50.24 humidity 50.0 270 > th dose independent rect. 5 19
953 50.24 precipitation 0.1 30 < th dose independent rect. 6 20
961 50.24 precipitation 0.1 30 < th dose dependent rect. 6 20
972 50.27 precipitation 0.1 270 < th dose independent rect. 1 2
973 50.27 humidity 50.0 270 > th dose independent rect. 4 9
975 50.27 precipitation 0.1 270 < th dose dependent rect. 1 2
988 50.29 wind 1.0 270 > th dose independent rect. 24 5