Os02g0508500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0508500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.98 | 0.266 | 9.82 | -0.313 | 0.339 | 0.37 | 0.1 | 0.769 | 0.335 | 24 | 50.05 | 6936 | -- | -- |
| 32.89 | 0.267 | 9.81 | -0.335 | 0.343 | 0.508 | 0.103 | -- | 0.354 | 0.0496 | 49.14 | 6928 | -- | -- |
| 31.83 | 0.263 | 9.83 | -0.35 | 0.346 | 0.314 | -- | 1.27 | 0.329 | 23.8 | 52.78 | 6934 | -- | -- |
| 32.88 | 0.267 | 9.81 | -0.32 | 0.336 | 0.535 | -- | -- | 0.341 | 24 | 49.01 | 6925 | -- | -- |
| 39.05 | 0.291 | 9.81 | -0.344 | -- | 0.323 | -- | 1.22 | 0.343 | -- | 52.99 | 7121 | -- | -- |
| 37.55 | 0.287 | 9.8 | -0.474 | 0.332 | -- | 0.00223 | -- | 0.361 | 23.8 | -- | -- | -- | -- |
| 37.55 | 0.287 | 9.8 | -0.474 | 0.332 | -- | -- | -- | 0.361 | 23.8 | -- | -- | -- | -- |
| 39.75 | 0.294 | 9.81 | -0.306 | -- | 0.54 | -- | -- | 0.344 | -- | 49 | 7052 | -- | -- |
| 35.23 | 0.276 | 9.81 | -- | 0.325 | 0.672 | -- | -- | 0.348 | 24 | 49 | 6940 | -- | -- |
| 44.47 | 0.312 | 9.8 | -0.465 | -- | -- | -- | -- | 0.365 | -- | -- | -- | -- | -- |
| 43.48 | 0.308 | 9.79 | -- | 0.326 | -- | -- | -- | 0.414 | 23.7 | -- | -- | -- | -- |
| 41.91 | 0.302 | 9.8 | -- | -- | 0.668 | -- | -- | 0.375 | -- | 49.81 | 7018 | -- | -- |
| 50.17 | 0.331 | 9.79 | -- | -- | -- | -- | -- | 0.417 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.47 | wind | 7.0 | 14400 | < th | dose independent | rect. | 15 | 6 |
| 2 | 30.53 | wind | 7.0 | 14400 | > th | dose independent | rect. | 15 | 6 |
| 5 | 30.62 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 15 | 6 |
| 11 | 30.70 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 12 | 2 |
| 12 | 30.70 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 18 | 30.77 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 19 | 30.79 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 23 | 30.79 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 24 | 30.80 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 39 | 30.89 | wind | 7.0 | 14400 | < th | dose independent | sin | 17 | NA |
| 44 | 30.91 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 51 | 30.93 | wind | 7.0 | 14400 | > th | dose independent | sin | 16 | NA |
| 64 | 30.97 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 18 | 3 |
| 74 | 31.00 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 98 | 31.05 | wind | 9.0 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 111 | 31.08 | wind | 7.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 117 | 31.08 | wind | 9.0 | 14400 | > th | dose dependent | sin | 13 | NA |
| 123 | 31.09 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 126 | 31.10 | wind | 7.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 131 | 31.10 | wind | 7.0 | 14400 | > th | dose dependent | sin | 15 | NA |
| 141 | 31.11 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 147 | 31.12 | wind | 7.0 | 14400 | > th | dose independent | rect. | 12 | 18 |
| 173 | 31.14 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 17 | 20 |
| 176 | 31.15 | wind | 7.0 | 14400 | > th | dose independent | rect. | 15 | 15 |
| 249 | 31.24 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 264 | 31.25 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 15 | 20 |
| 286 | 31.29 | wind | 9.0 | 14400 | > th | dose independent | rect. | 17 | 19 |
| 318 | 31.34 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 20 | 14 |
| 319 | 31.34 | wind | 7.0 | 14400 | > th | dose independent | rect. | 5 | 16 |
| 348 | 31.37 | wind | 9.0 | 14400 | < th | dose independent | rect. | 20 | 6 |
| 349 | 31.37 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 4 | 7 |
| 353 | 31.37 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 23 | 12 |
| 356 | 31.37 | wind | 7.0 | 14400 | < th | dose independent | rect. | 5 | 16 |
| 362 | 31.37 | radiation | 30.0 | 43200 | < th | dose dependent | rect. | 17 | 14 |
| 366 | 31.38 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 402 | 31.40 | wind | 9.0 | 14400 | > th | dose independent | rect. | 20 | 6 |
| 422 | 31.41 | wind | 9.0 | 14400 | < th | dose independent | rect. | 17 | 18 |
| 440 | 31.42 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 20 | 8 |
| 486 | 31.45 | radiation | 1.0 | 43200 | > th | dose dependent | rect. | 17 | 14 |
| 487 | 31.46 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 508 | 31.47 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 20 | 15 |
| 521 | 31.48 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 551 | 31.49 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 13 | 19 |
| 575 | 31.50 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 16 | 16 |
| 589 | 31.51 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 598 | 31.52 | humidity | 50.0 | 14400 | < th | dose independent | sin | 15 | NA |
| 667 | 31.56 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 13 | 8 |
| 669 | 31.56 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 20 | 9 |
| 685 | 31.56 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 692 | 31.57 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 732 | 31.58 | radiation | 30.0 | 43200 | < th | dose independent | sin | 14 | NA |
| 767 | 31.59 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 14 | 3 |
| 781 | 31.60 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 13 | 5 |
| 812 | 31.60 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 20 | 4 |
| 898 | 31.62 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 13 | 21 |
| 908 | 31.63 | wind | 1.0 | 14400 | > th | dose independent | rect. | 8 | 2 |
| 927 | 31.63 | radiation | 30.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 966 | 31.64 | radiation | 1.0 | 43200 | > th | dose dependent | sin | 13 | NA |
| 967 | 31.64 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 971 | 31.64 | radiation | 10.0 | 43200 | > th | dose dependent | rect. | 16 | 2 |