Os02g0507100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0507100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 188.32 | 0.645 | 3.42 | -0.729 | 0.339 | 0.506 | 0.189 | -3.54 | 0.0489 | 18.7 | 3.989 | 4 | -- | -- |
| 201.44 | 0.661 | 3.47 | -0.669 | 0.334 | 1.18 | -0.204 | -- | 0.0191 | 18.5 | 4.914 | 4 | -- | -- |
| 188.41 | 0.639 | 3.42 | -0.732 | 0.341 | 0.507 | -- | -3.5 | 0.0486 | 18.8 | 4 | 4 | -- | -- |
| 201.53 | 0.661 | 3.47 | -0.665 | 0.335 | 1.21 | -- | -- | 0.0161 | 18.6 | 4.9 | 4 | -- | -- |
| 193.71 | 0.648 | 3.41 | -0.707 | -- | 0.706 | -- | -3.23 | 0.044 | -- | 3.7 | 4 | -- | -- |
| 217.71 | 0.692 | 3.47 | -0.884 | 0.526 | -- | -0.954 | -- | -0.0174 | 17.1 | -- | -- | -- | -- |
| 219.87 | 0.694 | 3.48 | -0.885 | 0.524 | -- | -- | -- | -0.0222 | 17.5 | -- | -- | -- | -- |
| 206.43 | 0.669 | 3.46 | -0.649 | -- | 1.2 | -- | -- | 0.00283 | -- | 3.921 | 4 | -- | -- |
| 212.59 | 0.679 | 3.45 | -- | 0.312 | 1.44 | -- | -- | 0.086 | 18.7 | 4.9 | 4 | -- | -- |
| 234.17 | 0.715 | 3.47 | -0.903 | -- | -- | -- | -- | -0.035 | -- | -- | -- | -- | -- |
| 240.52 | 0.725 | 3.45 | -- | 0.539 | -- | -- | -- | 0.0764 | 17.4 | -- | -- | -- | -- |
| 216.91 | 0.686 | 3.44 | -- | -- | 1.38 | -- | -- | 0.0766 | -- | 3.954 | 4 | -- | -- |
| 255.65 | 0.746 | 3.45 | -- | -- | -- | -- | -- | 0.0651 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 183.72 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 1 | 15 |
| 2 | 183.72 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 1 | 18 |
| 24 | 187.88 | wind | 7.0 | 270 | > th | dose dependent | rect. | 1 | 7 |
| 25 | 188.47 | wind | 1.0 | 30 | > th | dose dependent | rect. | 1 | 18 |
| 49 | 190.01 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 4 | 9 |
| 54 | 190.09 | wind | 7.0 | 270 | > th | dose independent | rect. | 1 | 7 |
| 57 | 190.26 | wind | 5.0 | 10 | < th | dose independent | rect. | 19 | 23 |
| 66 | 190.44 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 3 | 8 |
| 72 | 190.45 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 3 | 8 |
| 80 | 190.58 | wind | 5.0 | 10 | > th | dose independent | rect. | 11 | 19 |
| 86 | 190.65 | wind | 9.0 | 270 | > th | dose independent | rect. | 1 | 9 |
| 96 | 190.89 | temperature | 30.0 | 10 | < th | dose dependent | sin | 2 | NA |
| 101 | 191.01 | wind | 5.0 | 10 | > th | dose independent | rect. | 1 | 18 |
| 107 | 191.06 | wind | 3.0 | 270 | > th | dose dependent | rect. | 21 | 20 |
| 123 | 191.40 | temperature | 15.0 | 10 | > th | dose dependent | sin | 2 | NA |
| 140 | 191.66 | wind | 3.0 | 10 | > th | dose dependent | rect. | 11 | 20 |
| 147 | 191.70 | wind | 3.0 | 10 | > th | dose dependent | rect. | 22 | 21 |
| 158 | 191.85 | wind | 5.0 | 270 | > th | dose independent | rect. | 21 | 20 |
| 177 | 192.01 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 11 | 8 |
| 191 | 192.21 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 24 | 11 |
| 206 | 192.25 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 7 | 21 |
| 207 | 192.26 | wind | 5.0 | 10 | < th | dose independent | rect. | 19 | 21 |
| 229 | 192.44 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 4 | 11 |
| 248 | 192.53 | wind | 7.0 | 270 | > th | dose dependent | rect. | 22 | 12 |
| 249 | 192.54 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 11 | 5 |
| 254 | 192.56 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 12 | 3 |
| 256 | 192.57 | wind | 1.0 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 290 | 192.82 | temperature | 20.0 | 90 | < th | dose independent | rect. | 12 | 4 |
| 315 | 192.93 | wind | 9.0 | 720 | > th | dose independent | rect. | 21 | 14 |
| 323 | 192.98 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 12 | 1 |
| 328 | 193.01 | wind | 5.0 | 270 | < th | dose independent | rect. | 19 | 16 |
| 333 | 193.04 | temperature | 20.0 | 270 | < th | dose independent | rect. | 12 | 1 |
| 347 | 193.11 | temperature | 20.0 | 10 | < th | dose independent | rect. | 12 | 5 |
| 392 | 193.35 | wind | 9.0 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 419 | 193.53 | wind | 5.0 | 10 | < th | dose independent | rect. | 4 | 23 |
| 446 | 193.63 | wind | 5.0 | 10 | > th | dose independent | rect. | 17 | 23 |
| 456 | 193.67 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 461 | 193.68 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 494 | 193.80 | atmosphere | 1010.0 | 720 | > th | dose dependent | rect. | 5 | 1 |
| 502 | 193.82 | wind | 5.0 | 10 | > th | dose independent | rect. | 14 | 23 |
| 505 | 193.83 | wind | 5.0 | 10 | < th | dose independent | rect. | 17 | 23 |
| 506 | 193.84 | wind | 5.0 | 10 | > th | dose independent | no | NA | NA |
| 511 | 193.85 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 24 | 17 |
| 570 | 194.04 | temperature | 20.0 | 10 | < th | dose independent | rect. | 10 | 7 |
| 605 | 194.13 | wind | 3.0 | 10 | > th | dose dependent | rect. | 11 | 8 |
| 622 | 194.18 | wind | 5.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 629 | 194.21 | wind | 5.0 | 10 | > th | dose independent | rect. | 5 | 23 |
| 637 | 194.25 | wind | 5.0 | 270 | > th | dose dependent | sin | 7 | NA |
| 711 | 194.48 | temperature | 25.0 | 90 | < th | dose independent | rect. | 24 | 17 |
| 718 | 194.51 | wind | 5.0 | 10 | < th | dose independent | no | NA | NA |
| 719 | 194.51 | precipitation | 0.1 | 90 | > th | dose independent | sin | 4 | NA |
| 738 | 194.58 | precipitation | 0.1 | 90 | < th | dose independent | sin | 4 | NA |
| 739 | 194.58 | temperature | 15.0 | 720 | < th | dose independent | rect. | 4 | 1 |
| 747 | 194.58 | precipitation | 0.1 | 90 | < th | dose dependent | sin | 4 | NA |
| 748 | 194.58 | temperature | 15.0 | 720 | < th | dose dependent | rect. | 4 | 1 |
| 774 | 194.63 | wind | 5.0 | 10 | < th | dose independent | rect. | 23 | 23 |
| 819 | 194.75 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 3 | 5 |
| 833 | 194.76 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 3 | 3 |
| 846 | 194.76 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 3 | 3 |
| 886 | 194.80 | wind | 3.0 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 954 | 195.00 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 6 | 11 |
| 1000 | 195.09 | wind | 5.0 | 10 | < th | dose independent | rect. | 15 | 23 |