Os02g0505500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0505500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 111.23 | 0.496 | 3.17 | 1.15 | 0.138 | 0.774 | -0.392 | -5.39 | 0.311 | 17.1 | 29.6 | 1686 | -- | -- |
| 114.79 | 0.499 | 3.26 | 0.494 | 0.0361 | 0.771 | -0.201 | -- | 0.281 | 16.6 | 19.69 | 5239 | -- | -- |
| 111.59 | 0.492 | 3.17 | 1.15 | 0.138 | 0.774 | -- | -5.39 | 0.311 | 16.6 | 29.59 | 1686 | -- | -- |
| 113.55 | 0.496 | 3.27 | 0.235 | 0.0324 | 0.449 | -- | -- | 0.233 | 12.8 | 21.07 | 5149 | -- | -- |
| 110.3 | 0.489 | 3.18 | 1.2 | -- | 0.74 | -- | -4.85 | 0.288 | -- | 29.66 | 5938 | -- | -- |
| 117.03 | 0.507 | 3.3 | -0.0531 | 0.0757 | -- | -0.33 | -- | 0.0903 | 17.2 | -- | -- | -- | -- |
| 117.26 | 0.507 | 3.3 | -0.0523 | 0.0769 | -- | -- | -- | 0.089 | 16 | -- | -- | -- | -- |
| 113.62 | 0.496 | 3.27 | 0.231 | -- | 0.448 | -- | -- | 0.23 | -- | 21.1 | 5155 | -- | -- |
| 114.08 | 0.497 | 3.28 | -- | 0.0215 | 0.322 | -- | -- | 0.18 | 12.3 | 21.1 | 3682 | -- | -- |
| 117.58 | 0.507 | 3.3 | -0.0554 | -- | -- | -- | -- | 0.0869 | -- | -- | -- | -- | -- |
| 117.33 | 0.507 | 3.3 | -- | 0.0779 | -- | -- | -- | 0.0948 | 15.9 | -- | -- | -- | -- |
| 114.11 | 0.498 | 3.28 | -- | -- | 0.328 | -- | -- | 0.174 | -- | 21.1 | 3680 | -- | -- |
| 117.66 | 0.506 | 3.3 | -- | -- | -- | -- | -- | 0.0931 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 104.84 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 2 | 104.88 | wind | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 3 | 104.90 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 4 | 104.95 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 5 | 104.96 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 8 | 105.01 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 16 | 105.14 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 18 | 105.16 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 19 | 105.20 | wind | 9.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 20 | 105.20 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 22 | 105.20 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 23 | 105.20 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 26 | 105.20 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 27 | 105.20 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 29 | 105.20 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 34 | 105.20 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 35 | 105.20 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 36 | 105.20 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 41 | 105.20 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 45 | 105.33 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 50 | 105.45 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 53 | 105.76 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 69 | 106.44 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 98 | 106.69 | wind | 9.0 | 30 | > th | dose dependent | rect. | 18 | 8 |
| 115 | 106.76 | wind | 9.0 | 10 | > th | dose dependent | rect. | 18 | 4 |
| 128 | 106.77 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 129 | 106.77 | wind | 9.0 | 90 | > th | dose dependent | rect. | 18 | 3 |
| 138 | 106.87 | wind | 9.0 | 10 | > th | dose dependent | rect. | 18 | 2 |
| 143 | 106.90 | wind | 9.0 | 10 | > th | dose independent | rect. | 18 | 1 |
| 152 | 107.24 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 18 | 1 |
| 176 | 107.44 | wind | 9.0 | 90 | > th | dose independent | rect. | 18 | 3 |
| 177 | 107.44 | wind | 9.0 | 10 | > th | dose independent | rect. | 18 | 4 |
| 311 | 110.01 | wind | 3.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 312 | 110.10 | wind | 3.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 317 | 110.21 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 10 | 2 |
| 318 | 110.23 | wind | 9.0 | 10 | > th | dose dependent | sin | 11 | NA |
| 322 | 110.34 | radiation | 1.0 | 30 | > th | dose independent | rect. | 18 | 1 |
| 335 | 110.40 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 350 | 110.57 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 13 | 6 |
| 353 | 110.61 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 13 | 8 |
| 363 | 110.75 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 14 | 4 |
| 364 | 110.75 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 13 | 6 |
| 367 | 110.76 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 4 |
| 371 | 110.78 | radiation | 20.0 | 270 | > th | dose dependent | rect. | 16 | 1 |
| 386 | 110.79 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 6 |
| 389 | 110.79 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 10 |
| 390 | 110.79 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 14 |
| 473 | 110.94 | temperature | 30.0 | 14400 | < th | dose independent | sin | 14 | NA |
| 501 | 110.95 | temperature | 30.0 | 14400 | > th | dose independent | sin | 14 | NA |
| 543 | 110.98 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 1 | 3 |
| 571 | 111.02 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 620 | 111.04 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 10 | 2 |
| 668 | 111.11 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 720 | 111.15 | wind | 5.0 | 14400 | < th | dose independent | rect. | 9 | 6 |
| 746 | 111.16 | temperature | 25.0 | 14400 | > th | dose dependent | sin | 17 | NA |
| 747 | 111.16 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 10 | 4 |
| 825 | 111.19 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 14 | 5 |
| 845 | 111.20 | humidity | 60.0 | 270 | < th | dose independent | rect. | 16 | 4 |
| 910 | 111.22 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 972 | 111.24 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 24 | 20 |
| 985 | 111.25 | temperature | 25.0 | 14400 | > th | dose dependent | no | NA | NA |