Os02g0504700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0504700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 157.67 | 0.59 | 3.24 | 0.244 | 0.269 | 2.11 | -0.0196 | -2.02 | 0.896 | 21.2 | 0.2886 | 249 | -- | -- |
| 157.81 | 0.585 | 3.24 | 0.227 | 0.271 | 1.58 | 0.00165 | -- | 0.888 | 21.4 | 0.4225 | 248 | -- | -- |
| 157.67 | 0.585 | 3.24 | 0.245 | 0.269 | 2.1 | -- | -2.02 | 0.896 | 21.2 | 0.2902 | 248 | -- | -- |
| 157.76 | 0.585 | 3.23 | 0.26 | 0.265 | 1.53 | -- | -- | 0.893 | 21.2 | 0.4243 | 248 | -- | -- |
| 161.82 | 0.592 | 3.23 | 0.243 | -- | 2.17 | -- | -1.8 | 0.897 | -- | 0.2835 | 248 | -- | -- |
| 164.27 | 0.601 | 3.24 | 0.357 | 0.302 | -- | 0.225 | -- | 0.873 | 21.2 | -- | -- | -- | -- |
| 164.45 | 0.601 | 3.24 | 0.349 | 0.302 | -- | -- | -- | 0.873 | 21.2 | -- | -- | -- | -- |
| 161.44 | 0.592 | 3.22 | 0.253 | -- | 1.59 | -- | -- | 0.893 | -- | 0.4388 | 183 | -- | -- |
| 159.48 | 0.588 | 3.24 | -- | 0.265 | 1.65 | -- | -- | 0.867 | 21.3 | 0.4075 | 248 | -- | -- |
| 169.72 | 0.609 | 3.23 | 0.35 | -- | -- | -- | -- | 0.872 | -- | -- | -- | -- | -- |
| 167.66 | 0.606 | 3.25 | -- | 0.302 | -- | -- | -- | 0.834 | 21.3 | -- | -- | -- | -- |
| 163.08 | 0.595 | 3.23 | -- | -- | 1.71 | -- | -- | 0.867 | -- | 0.5 | 183 | -- | -- |
| 172.96 | 0.614 | 3.24 | -- | -- | -- | -- | -- | 0.833 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 153.10 | wind | 7.0 | 90 | > th | dose dependent | sin | 10 | NA |
| 3 | 153.89 | wind | 9.0 | 90 | > th | dose dependent | rect. | 21 | 5 |
| 11 | 153.91 | wind | 9.0 | 30 | > th | dose independent | sin | 11 | NA |
| 12 | 153.91 | wind | 9.0 | 30 | < th | dose independent | sin | 11 | NA |
| 13 | 153.98 | wind | 9.0 | 90 | > th | dose independent | rect. | 21 | 5 |
| 46 | 154.29 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 50 | 154.43 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 14 | 4 |
| 90 | 154.51 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 93 | 154.54 | temperature | 30.0 | 14400 | > th | dose dependent | sin | 13 | NA |
| 309 | 155.00 | wind | 9.0 | 270 | > th | dose independent | rect. | 21 | 1 |
| 314 | 155.00 | wind | 9.0 | 270 | > th | dose dependent | rect. | 21 | 1 |
| 345 | 155.01 | temperature | 30.0 | 14400 | > th | dose dependent | no | NA | NA |
| 465 | 155.09 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 16 | 23 |
| 477 | 155.15 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 16 | 3 |
| 491 | 155.16 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 16 | 1 |
| 493 | 155.16 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 16 | 1 |
| 545 | 155.23 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 16 | 3 |
| 547 | 155.23 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 16 | 6 |
| 549 | 155.23 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 16 | 12 |
| 564 | 155.25 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 565 | 155.25 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 573 | 155.28 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 11 | 2 |
| 630 | 155.34 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 16 | 21 |
| 634 | 155.36 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 16 | 21 |
| 678 | 155.53 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 15 | 3 |
| 687 | 155.54 | temperature | 30.0 | 14400 | > th | dose independent | sin | 11 | NA |
| 701 | 155.59 | temperature | 30.0 | 14400 | < th | dose independent | sin | 11 | NA |
| 713 | 155.60 | wind | 7.0 | 90 | > th | dose dependent | rect. | 17 | 12 |
| 716 | 155.61 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 15 | 3 |
| 743 | 155.64 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 3 | 10 |
| 747 | 155.64 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 21 | 16 |
| 781 | 155.68 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 831 | 155.73 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 9 | 10 |
| 881 | 155.76 | temperature | 30.0 | 14400 | > th | dose independent | no | NA | NA |