Os02g0503900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os02g0503900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 254.06 | 0.749 | 9.56 | 1.35 | 0.215 | 3.11 | 2.45 | 3.56 | -0.87 | 9.35 | 18.1 | 4239 | -- | -- |
| 264.75 | 0.758 | 9.44 | 1.66 | 0.191 | 2.67 | 2.52 | -- | -0.755 | 8.77 | 18.3 | 3241 | -- | -- |
| 275.55 | 0.773 | 9.55 | 1.5 | 0.221 | 3.11 | -- | 3.33 | -0.842 | 9.84 | 18.2 | 4363 | -- | -- |
| 281.96 | 0.782 | 9.46 | 1.59 | 0.215 | 2.42 | -- | -- | -0.839 | 8.82 | 18.3 | 3062 | -- | -- |
| 278.26 | 0.777 | 9.56 | 1.48 | -- | 3.08 | -- | 3.33 | -0.854 | -- | 18.1 | 4304 | -- | -- |
| 327.47 | 0.848 | 9.54 | 0.444 | 0.193 | -- | 2.45 | -- | -1.24 | 9.46 | -- | -- | -- | -- |
| 348.74 | 0.875 | 9.54 | 0.538 | 0.205 | -- | -- | -- | -1.24 | 11.6 | -- | -- | -- | -- |
| 284.32 | 0.785 | 9.46 | 1.58 | -- | 2.41 | -- | -- | -0.83 | -- | 18.3 | 3083 | -- | -- |
| 331.89 | 0.848 | 9.53 | -- | 0.335 | 2.04 | -- | -- | -1.17 | 8.22 | 17.62 | 3067 | -- | -- |
| 351.38 | 0.876 | 9.55 | 0.533 | -- | -- | -- | -- | -1.24 | -- | -- | -- | -- | -- |
| 356.38 | 0.883 | 9.56 | -- | 0.199 | -- | -- | -- | -1.3 | 11.5 | -- | -- | -- | -- |
| 328.97 | 0.845 | 9.53 | -- | -- | 1.46 | -- | -- | -1.14 | -- | 17.94 | 3052 | -- | -- |
| 358.86 | 0.884 | 9.56 | -- | -- | -- | -- | -- | -1.3 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 229.50 | wind | 1 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 2 | 231.60 | wind | 1 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 3 | 232.90 | wind | 1 | 14400 | > th | dose independent | rect. | 5 | 21 |
| 4 | 232.99 | wind | 1 | 14400 | < th | dose dependent | rect. | 5 | 22 |
| 5 | 233.10 | wind | 1 | 14400 | < th | dose independent | rect. | 5 | 21 |
| 11 | 233.61 | wind | 1 | 14400 | > th | dose independent | rect. | 5 | 18 |
| 12 | 233.64 | wind | 1 | 14400 | > th | dose independent | rect. | 23 | 3 |
| 13 | 233.78 | wind | 1 | 14400 | < th | dose independent | rect. | 23 | 3 |
| 17 | 234.08 | wind | 1 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 22 | 234.35 | wind | 1 | 14400 | < th | dose dependent | rect. | 20 | 18 |
| 32 | 234.68 | wind | 1 | 14400 | < th | dose independent | rect. | 21 | 5 |
| 35 | 234.79 | wind | 1 | 14400 | < th | dose dependent | rect. | 20 | 7 |
| 40 | 234.91 | wind | 1 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 43 | 234.94 | wind | 1 | 14400 | > th | dose independent | rect. | 5 | 13 |
| 45 | 235.14 | wind | 1 | 43200 | > th | dose independent | rect. | 10 | 4 |
| 54 | 235.32 | wind | 1 | 43200 | < th | dose independent | rect. | 10 | 4 |
| 63 | 235.43 | humidity | 90 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 65 | 235.48 | humidity | 90 | 43200 | < th | dose dependent | rect. | 20 | 3 |
| 68 | 235.49 | wind | 1 | 14400 | < th | dose independent | rect. | 5 | 10 |
| 74 | 235.58 | wind | 1 | 14400 | < th | dose independent | rect. | 5 | 12 |
| 83 | 235.66 | humidity | 90 | 43200 | < th | dose dependent | rect. | 18 | 9 |
| 84 | 235.66 | humidity | 90 | 43200 | < th | dose dependent | rect. | 18 | 13 |
| 94 | 235.75 | humidity | 70 | 43200 | > th | dose dependent | rect. | 20 | 4 |
| 98 | 235.79 | wind | 5 | 14400 | < th | dose dependent | rect. | 13 | 19 |
| 103 | 235.86 | humidity | 70 | 43200 | > th | dose dependent | rect. | 21 | 2 |
| 108 | 235.89 | humidity | 50 | 43200 | > th | dose dependent | rect. | 18 | 13 |
| 112 | 235.91 | wind | 1 | 14400 | < th | dose dependent | rect. | 23 | 3 |
| 116 | 235.92 | humidity | 80 | 43200 | < th | dose independent | rect. | 16 | 10 |
| 124 | 235.96 | humidity | 80 | 43200 | > th | dose independent | rect. | 17 | 9 |
| 128 | 235.97 | humidity | 50 | 43200 | > th | dose dependent | rect. | 20 | 11 |
| 129 | 235.97 | wind | 9 | 14400 | < th | dose dependent | rect. | 15 | 17 |
| 140 | 236.04 | humidity | 50 | 43200 | > th | dose dependent | rect. | 4 | 2 |
| 245 | 236.46 | wind | 3 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 284 | 236.63 | wind | 1 | 14400 | < th | dose dependent | rect. | 5 | 10 |
| 292 | 236.70 | humidity | 80 | 43200 | > th | dose independent | rect. | 16 | 15 |
| 300 | 236.72 | wind | 1 | 14400 | < th | dose dependent | rect. | 10 | 23 |
| 302 | 236.73 | humidity | 70 | 43200 | < th | dose independent | rect. | 12 | 19 |
| 307 | 236.74 | wind | 1 | 14400 | > th | dose dependent | rect. | 15 | 17 |
| 324 | 236.81 | humidity | 80 | 43200 | < th | dose independent | rect. | 16 | 15 |
| 329 | 236.82 | wind | 1 | 14400 | < th | dose dependent | no | NA | NA |
| 355 | 236.91 | humidity | 70 | 43200 | > th | dose independent | rect. | 12 | 19 |
| 363 | 236.94 | wind | 1 | 14400 | < th | dose dependent | sin | 11 | NA |
| 388 | 237.02 | humidity | 90 | 43200 | < th | dose dependent | sin | 12 | NA |
| 389 | 237.02 | humidity | 50 | 43200 | > th | dose dependent | rect. | 1 | 6 |
| 406 | 237.08 | humidity | 60 | 43200 | > th | dose dependent | sin | 12 | NA |
| 471 | 237.28 | radiation | 40 | 43200 | < th | dose dependent | rect. | 17 | 4 |
| 482 | 237.30 | radiation | 10 | 43200 | < th | dose dependent | rect. | 17 | 12 |
| 495 | 237.33 | radiation | 40 | 43200 | < th | dose dependent | rect. | 17 | 8 |
| 553 | 237.43 | radiation | 1 | 43200 | > th | dose dependent | rect. | 17 | 12 |
| 557 | 237.44 | humidity | 50 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 571 | 237.46 | radiation | 1 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 582 | 237.47 | wind | 1 | 14400 | > th | dose independent | rect. | 20 | 19 |
| 590 | 237.47 | wind | 1 | 14400 | < th | dose dependent | rect. | 8 | 23 |
| 623 | 237.56 | humidity | 80 | 43200 | > th | dose independent | sin | 14 | NA |
| 624 | 237.56 | humidity | 80 | 43200 | < th | dose independent | sin | 15 | NA |
| 634 | 237.57 | wind | 1 | 14400 | < th | dose independent | rect. | 21 | 18 |
| 688 | 237.67 | wind | 1 | 14400 | > th | dose independent | sin | 0 | NA |
| 764 | 237.85 | wind | 1 | 14400 | < th | dose independent | rect. | 18 | 20 |
| 820 | 237.98 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 21 | 3 |
| 859 | 238.05 | humidity | 60 | 43200 | > th | dose dependent | rect. | 12 | 19 |
| 871 | 238.08 | wind | 1 | 14400 | < th | dose independent | sin | 0 | NA |
| 894 | 238.12 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 918 | 238.15 | humidity | 70 | 43200 | > th | dose independent | rect. | 18 | 23 |
| 921 | 238.16 | radiation | 10 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 947 | 238.22 | wind | 1 | 14400 | < th | dose dependent | rect. | 1 | 23 |
| 966 | 238.26 | humidity | 70 | 43200 | > th | dose independent | rect. | 20 | 23 |