Os02g0503300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : X8 domain containing protein.
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Os02g0503300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : X8 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 145.48 | 0.567 | 6.24 | 2.52 | 1.06 | 4.46 | 1.05 | -0.494 | 0.0671 | 5.08 | 9.4 | 939 | 23.3 | -- |
| 145.6 | 0.562 | 6.23 | 2.58 | 1.07 | 4.49 | 1.24 | -- | 0.0848 | 4.83 | 9.283 | 935 | 23.3 | -- |
| 147.1 | 0.565 | 6.25 | 2.43 | 1.06 | 4.35 | -- | -1.44 | 0.0549 | 5.62 | 10.12 | 922 | 23 | -- |
| 149.44 | 0.569 | 6.23 | 2.58 | 1.04 | 4.38 | -- | -- | 0.0844 | 5.47 | 9.313 | 954 | 23.3 | -- |
| 158.15 | 0.586 | 6.26 | 2.43 | -- | 3.92 | -- | -0.178 | 0.116 | -- | 4.084 | 2268 | 23 | -- |
| 289.09 | 0.797 | 6.12 | 3.46 | 1.48 | -- | -0.334 | -- | 0.655 | 14.5 | -- | -- | -- | -- |
| 289.49 | 0.797 | 6.12 | 3.45 | 1.48 | -- | -- | -- | 0.653 | 14.4 | -- | -- | -- | -- |
| 157.85 | 0.585 | 6.25 | 2.44 | -- | 3.9 | -- | -- | 0.0833 | -- | 2.379 | 2306 | 23.3 | -- |
| 303.31 | 0.811 | 6.32 | -- | 1.45 | 5.49 | -- | -- | -0.374 | 5.98 | 10.9 | 999 | 23.3 | -- |
| 418.5 | 0.956 | 6.13 | 3.39 | -- | -- | -- | -- | 0.616 | -- | -- | -- | -- | -- |
| 603.84 | 1.15 | 6.2 | -- | 1.41 | -- | -- | -- | 0.268 | 14.4 | -- | -- | -- | -- |
| 252.81 | 0.741 | 6.31 | -- | -- | 5.06 | -- | -- | -0.329 | -- | -3.56 | 5101 | 22.6 | -- |
| 721.81 | 1.25 | 6.21 | -- | -- | -- | -- | -- | 0.24 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 149.39 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 22 |
| 2 | 152.09 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 18 |
| 7 | 153.91 | temperature | 20 | 270 | > th | dose dependent | rect. | 4 | 20 |
| 17 | 154.73 | temperature | 15 | 720 | > th | dose dependent | sin | 4 | NA |
| 53 | 156.96 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 19 |
| 95 | 159.10 | temperature | 30 | 720 | < th | dose dependent | sin | 3 | NA |
| 106 | 159.66 | temperature | 20 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 189 | 163.15 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 12 |
| 191 | 163.23 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 10 |
| 288 | 164.83 | temperature | 30 | 4320 | < th | dose dependent | rect. | 22 | 14 |
| 320 | 165.14 | temperature | 10 | 4320 | > th | dose dependent | rect. | 22 | 14 |
| 352 | 165.37 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 3 |
| 383 | 165.55 | temperature | 25 | 4320 | < th | dose dependent | rect. | 22 | 1 |
| 401 | 165.65 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 421 | 165.71 | temperature | 25 | 4320 | < th | dose dependent | rect. | 17 | 18 |
| 425 | 165.74 | temperature | 25 | 1440 | < th | dose independent | rect. | 7 | 6 |
| 449 | 165.85 | temperature | 25 | 1440 | > th | dose independent | rect. | 7 | 6 |
| 454 | 165.87 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 9 |
| 458 | 165.89 | temperature | 10 | 4320 | > th | dose dependent | sin | 7 | NA |
| 579 | 166.26 | temperature | 25 | 1440 | > th | dose independent | rect. | 7 | 14 |
| 640 | 166.43 | temperature | 25 | 1440 | < th | dose dependent | rect. | 6 | 3 |
| 681 | 166.53 | temperature | 25 | 1440 | > th | dose independent | rect. | 5 | 16 |
| 700 | 166.55 | temperature | 30 | 4320 | < th | dose dependent | rect. | 7 | 23 |
| 701 | 166.56 | temperature | 30 | 4320 | < th | dose dependent | no | NA | NA |
| 726 | 166.62 | temperature | 30 | 4320 | < th | dose dependent | rect. | 3 | 23 |
| 872 | 166.93 | temperature | 25 | 1440 | < th | dose independent | rect. | 7 | 14 |
| 873 | 166.93 | temperature | 25 | 1440 | < th | dose independent | rect. | 5 | 16 |