Os02g0503100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (AtF3'H) (Cytochrome P450 75B1) (TRANSPARENT TESTA 7 protein).
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Os02g0503100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (AtF3'H) (Cytochrome P450 75B1) (TRANSPARENT TESTA 7 protein).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 51.41 | 0.337 | 13.1 | 0.372 | 1.21 | -0.803 | -1.46 | 0.811 | -0.256 | 20.6 | 20 | 10 | -- | -- |
| 53.8 | 0.342 | 13.1 | 0.398 | 1.18 | -0.769 | -1.16 | -- | -0.27 | 20.4 | 22.68 | 9 | -- | -- |
| 56.23 | 0.352 | 13.1 | 0.377 | 1.13 | -0.72 | -- | -0.0152 | -0.253 | 20.3 | 23.13 | 12 | -- | -- |
| 54.86 | 0.345 | 13.1 | 0.385 | 1.19 | -0.797 | -- | -- | -0.259 | 20.6 | 21.87 | 9 | -- | -- |
| 64.86 | 0.375 | 13 | 0.275 | -- | -1.16 | -- | 0.934 | -0.255 | -- | 6.02 | 724 | -- | -- |
| 63.69 | 0.374 | 13.1 | 0.403 | 0.927 | -- | -1.06 | -- | -0.245 | 17.8 | -- | -- | -- | -- |
| 66.43 | 0.382 | 13.1 | 0.411 | 0.921 | -- | -- | -- | -0.249 | 17.8 | -- | -- | -- | -- |
| 67.42 | 0.382 | 13 | 0.325 | -- | -1.09 | -- | -- | -0.294 | -- | 4.232 | 715 | -- | -- |
| 58.73 | 0.357 | 13.1 | -- | 1.19 | -0.817 | -- | -- | -0.296 | 20.7 | 22.1 | 9 | -- | -- |
| 110.42 | 0.491 | 13.1 | 0.382 | -- | -- | -- | -- | -0.27 | -- | -- | -- | -- | -- |
| 70.87 | 0.394 | 13.1 | -- | 0.915 | -- | -- | -- | -0.294 | 17.8 | -- | -- | -- | -- |
| 70.53 | 0.391 | 13.1 | -- | -- | -1.09 | -- | -- | -0.339 | -- | 3.12 | 698 | -- | -- |
| 114.27 | 0.499 | 13.1 | -- | -- | -- | -- | -- | -0.313 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 41.36 | temperature | 25.0 | 270 | < th | dose independent | rect. | 24 | 5 |
| 5 | 43.07 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 24 | 6 |
| 6 | 43.11 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 18 |
| 7 | 43.11 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 18 |
| 11 | 43.42 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 12 | 43.42 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 24 | 6 |
| 14 | 43.43 | temperature | 15.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 19 | 43.44 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 22 | 43.44 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 23 | 43.44 | radiation | 20.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 26 | 43.44 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 18 |
| 27 | 43.45 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 30 | 43.53 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 18 |
| 32 | 43.72 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 6 |
| 33 | 43.72 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 6 |
| 36 | 43.84 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 20 |
| 37 | 43.84 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 20 |
| 41 | 44.03 | wind | 1.0 | 270 | > th | dose independent | rect. | 6 | 18 |
| 43 | 44.07 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 46 | 44.12 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 48 | 44.12 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 24 | 13 |
| 53 | 44.18 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 56 | 44.18 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 59 | 44.18 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 60 | 44.18 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 62 | 44.18 | radiation | 20.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 65 | 44.18 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 20 |
| 75 | 44.20 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 78 | 44.24 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 20 |
| 82 | 44.35 | wind | 1.0 | 270 | > th | dose independent | rect. | 5 | 20 |
| 85 | 44.36 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 1 | 22 |
| 95 | 44.55 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 4 |
| 98 | 44.55 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 119 | 44.67 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 134 | 44.90 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 3 | 20 |
| 139 | 44.97 | radiation | 10.0 | 10 | < th | dose independent | rect. | 1 | 22 |
| 142 | 45.00 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 15 | 15 |
| 150 | 45.09 | wind | 1.0 | 270 | > th | dose independent | rect. | 18 | 7 |
| 197 | 45.36 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 3 | 10 |
| 204 | 45.41 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 13 | 16 |
| 205 | 45.41 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 207 | 45.43 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 217 | 45.49 | wind | 9.0 | 270 | < th | dose dependent | rect. | 24 | 6 |
| 218 | 45.50 | temperature | 15.0 | 270 | > th | dose independent | rect. | 13 | 16 |
| 222 | 45.52 | radiation | 1.0 | 270 | < th | dose independent | rect. | 24 | 14 |
| 227 | 45.53 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 266 | 45.58 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 18 |
| 270 | 45.63 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 3 | 12 |
| 272 | 45.65 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 18 |
| 274 | 45.66 | radiation | 10.0 | 10 | < th | dose independent | rect. | 3 | 20 |
| 279 | 45.68 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 19 |
| 280 | 45.69 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 13 | 16 |
| 281 | 45.70 | humidity | 90.0 | 90 | > th | dose independent | rect. | 1 | 6 |
| 284 | 45.71 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 3 | 3 |
| 290 | 45.76 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 297 | 45.77 | temperature | 15.0 | 90 | > th | dose independent | rect. | 15 | 15 |
| 300 | 45.78 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 3 | 16 |
| 305 | 45.80 | radiation | 40.0 | 90 | < th | dose independent | rect. | 13 | 17 |
| 309 | 45.81 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 7 |
| 311 | 45.81 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 17 |
| 312 | 45.81 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 7 |
| 316 | 45.83 | wind | 9.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 317 | 45.83 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 320 | 45.83 | humidity | 50.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 323 | 45.83 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 324 | 45.83 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 326 | 45.83 | radiation | 20.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 332 | 45.83 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 340 | 45.85 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 16 | 9 |
| 343 | 45.87 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 5 |
| 346 | 45.87 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 5 |
| 355 | 45.91 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 8 |
| 360 | 45.93 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 361 | 45.93 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 362 | 45.93 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 8 |
| 363 | 45.93 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 8 |
| 364 | 45.93 | radiation | 1.0 | 90 | > th | dose independent | rect. | 6 | 9 |
| 366 | 45.93 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 8 |
| 369 | 45.95 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 381 | 46.01 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 392 | 46.06 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 5 |
| 400 | 46.10 | radiation | 1.0 | 270 | < th | dose independent | rect. | 16 | 9 |
| 404 | 46.11 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 19 |
| 405 | 46.12 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 5 |
| 406 | 46.12 | temperature | 30.0 | 270 | < th | dose independent | rect. | 19 | 5 |
| 407 | 46.12 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 5 |
| 408 | 46.12 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 5 |
| 409 | 46.12 | radiation | 1.0 | 270 | < th | dose independent | rect. | 19 | 5 |
| 414 | 46.12 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 19 |
| 415 | 46.12 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 19 | 5 |
| 422 | 46.15 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 3 |
| 424 | 46.15 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 430 | 46.17 | wind | 9.0 | 270 | < th | dose independent | rect. | 18 | 7 |
| 433 | 46.19 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 16 |
| 439 | 46.21 | temperature | 10.0 | 270 | > th | dose independent | rect. | 18 | 7 |
| 440 | 46.21 | humidity | 50.0 | 270 | > th | dose independent | rect. | 18 | 7 |
| 441 | 46.21 | radiation | 20.0 | 270 | < th | dose independent | rect. | 18 | 7 |
| 445 | 46.21 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 17 |
| 446 | 46.21 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 17 |
| 455 | 46.24 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 18 | 7 |
| 477 | 46.32 | wind | 9.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 480 | 46.33 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 19 |
| 482 | 46.34 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 3 | 4 |
| 492 | 46.38 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 18 | 7 |
| 511 | 46.40 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 529 | 46.49 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 17 |
| 534 | 46.50 | wind | 9.0 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 539 | 46.52 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 20 |
| 592 | 46.62 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 19 |
| 593 | 46.62 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 19 |
| 597 | 46.64 | radiation | 10.0 | 90 | < th | dose dependent | sin | 3 | NA |
| 606 | 46.67 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 17 |
| 609 | 46.67 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 17 |
| 610 | 46.68 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 15 | 15 |
| 619 | 46.71 | radiation | 40.0 | 90 | < th | dose independent | rect. | 15 | 15 |
| 629 | 46.74 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 20 |
| 633 | 46.75 | wind | 9.0 | 270 | < th | dose dependent | rect. | 19 | 5 |
| 643 | 46.79 | wind | 1.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 727 | 46.98 | radiation | 10.0 | 30 | < th | dose independent | rect. | 3 | 16 |
| 741 | 47.00 | radiation | 1.0 | 270 | < th | dose independent | rect. | 24 | 19 |
| 749 | 47.01 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 13 | 17 |
| 772 | 47.08 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 24 | 6 |
| 786 | 47.11 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 7 | 20 |
| 788 | 47.11 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 7 | 20 |
| 813 | 47.15 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 16 |
| 816 | 47.15 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 16 |
| 854 | 47.26 | wind | 9.0 | 10 | < th | dose independent | rect. | 3 | 4 |
| 855 | 47.26 | temperature | 10.0 | 10 | > th | dose independent | rect. | 3 | 4 |
| 858 | 47.26 | humidity | 50.0 | 10 | > th | dose independent | rect. | 3 | 4 |
| 861 | 47.26 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 3 | 4 |
| 862 | 47.26 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 3 | 4 |
| 863 | 47.26 | radiation | 20.0 | 10 | < th | dose independent | rect. | 3 | 4 |
| 866 | 47.26 | temperature | 10.0 | 10 | > th | dose independent | rect. | 7 | 20 |
| 881 | 47.29 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 885 | 47.30 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 930 | 47.34 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 18 |
| 947 | 47.37 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 1 | 18 |
| 948 | 47.38 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 16 |
| 952 | 47.38 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 16 |