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Os02g0498100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.83 (0.0412) R2 : 0.64
β1 : 2.47 (0.152) R2dD : 0.214 R2D : 0.0697
β2 : 2.07 (0.108) R2dC : 0.303 R2C : 0.136
β3 : 3.48 (0.199) R2dE : 0.262 R2E : 0.0454
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.14 (0.0882) R2dN8 : 0.172 R2N8 : 0.0296
σ : 0.769
deviance : 272.82
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C
peak time of C : 19.7
E
wheather : radiation
threshold : 1.909
memory length : 850
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 15.6
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
256.04 0.752 8.83 2.46 2.09 3.36 1.2 -3.15 1.12 19.4 3.276 837 14.8 --
265.22 0.758 8.84 2.55 2.26 4.36 1.93 -- 1.09 18.5 1.779 807 14.9 --
259.59 0.75 8.83 2.41 2.16 3.48 -- -3.14 1.13 19.3 3.53 847 14.6 --
272.82 0.769 8.83 2.47 2.07 3.48 -- -- 1.14 19.7 1.909 850 15.6 --
300.58 0.807 8.79 2.16 -- 3.06 -- -1.1 1.1 -- 104 925 15.7 --
325.24 0.845 8.88 1.99 2.12 -- -0.814 -- 0.917 22.7 -- -- -- --
327.89 0.848 8.88 2.03 2.12 -- -- -- 0.921 22.6 -- -- -- --
301.09 0.808 8.78 2.16 -- 2.96 -- -- 1.11 -- 129.7 1011 16.2 --
403.88 0.936 8.93 -- 2.72 3.52 -- -- 0.792 18.9 8.482 817 11.9 --
605.81 1.15 8.82 2.07 -- -- -- -- 0.931 -- -- -- -- --
436.13 0.977 8.93 -- 2.14 -- -- -- 0.695 22.7 -- -- -- --
421.98 0.957 8.85 -- -- 2.71 -- -- 0.82 -- 168.1 1009 16 --
718.44 1.25 8.87 -- -- -- -- -- 0.702 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 256.46 radiation 1 720 > th dose independent rect. 9 21
2 258.39 radiation 1 720 > th dose independent rect. 9 10
24 259.91 humidity 80 720 < th dose independent rect. 9 6
27 260.97 radiation 1 720 < th dose dependent rect. 9 17
28 261.30 radiation 1 720 < th dose independent rect. 9 17
45 263.18 humidity 70 1440 > th dose dependent rect. 11 1
68 265.03 humidity 70 1440 > th dose dependent rect. 9 5
113 267.87 radiation 1 720 < th dose independent sin 20 NA
119 268.18 radiation 1 720 > th dose independent sin 20 NA
125 268.43 radiation 1 720 < th dose dependent sin 20 NA
127 268.45 humidity 90 1440 < th dose dependent rect. 11 1
143 269.20 humidity 80 1440 < th dose independent rect. 5 9
144 269.21 humidity 80 1440 < th dose independent rect. 3 11
146 269.25 humidity 80 720 < th dose independent rect. 3 13
151 269.36 humidity 80 1440 > th dose independent rect. 6 8
152 269.37 humidity 70 720 > th dose independent rect. 13 11
160 269.41 temperature 25 270 < th dose independent rect. 12 17
192 270.16 humidity 80 720 < th dose independent rect. 24 16
204 270.35 humidity 80 720 < th dose independent sin 1 NA
209 270.43 humidity 70 720 > th dose independent rect. 13 13
235 270.84 humidity 70 720 > th dose dependent rect. 9 15
240 270.99 radiation 1 720 < th dose independent rect. 9 11
249 271.25 temperature 25 720 > th dose dependent rect. 20 1
250 271.25 radiation 1 720 < th dose dependent rect. 21 22
251 271.26 temperature 25 720 < th dose independent rect. 12 12
257 271.33 radiation 1 720 < th dose independent rect. 21 22
288 271.97 humidity 80 1440 > th dose independent rect. 11 1
336 272.72 radiation 1 720 < th dose independent rect. 15 4
338 272.73 humidity 70 720 > th dose independent rect. 11 13
347 272.88 humidity 70 720 > th dose independent rect. 11 15
351 272.92 humidity 70 720 > th dose independent sin 17 NA
353 272.96 radiation 10 720 > th dose independent rect. 11 1
363 273.12 humidity 70 720 > th dose independent rect. 14 19
381 273.32 humidity 80 1440 > th dose independent sin 3 NA
385 273.36 radiation 1 720 < th dose dependent rect. 9 11
407 273.72 humidity 80 1440 < th dose dependent rect. 23 13
431 273.82 humidity 80 1440 < th dose dependent rect. 21 15
449 273.90 humidity 70 1440 > th dose independent rect. 18 18
464 274.03 humidity 90 10 < th dose dependent rect. 11 14
508 274.36 humidity 50 720 > th dose dependent rect. 16 8
652 275.47 humidity 70 1440 > th dose independent rect. 9 3
663 275.48 temperature 25 720 > th dose dependent rect. 18 5
756 276.29 humidity 90 720 < th dose dependent rect. 19 2
770 276.44 humidity 80 1440 < th dose dependent sin 6 NA
774 276.48 temperature 25 720 < th dose independent sin 18 NA
818 276.77 humidity 70 720 > th dose dependent sin 19 NA
820 276.79 humidity 70 1440 < th dose independent rect. 18 18
855 277.08 humidity 90 1440 < th dose dependent sin 4 NA
861 277.10 humidity 90 10 < th dose dependent rect. 11 8
892 277.29 humidity 90 720 < th dose dependent rect. 19 4
908 277.39 radiation 20 720 < th dose dependent rect. 15 10
913 277.44 radiation 1 720 < th dose dependent rect. 15 4
984 277.93 radiation 20 14400 < th dose independent rect. 21 9