Os02g0496900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0496900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 47.39 | 0.323 | 11.3 | 0.801 | 0.561 | -0.664 | 0.45 | -0.524 | 0.0806 | 16.1 | 21.13 | 1167 | -- | -- |
| 47.5 | 0.321 | 11.2 | 0.927 | 0.556 | -0.656 | 0.484 | -- | 0.112 | 15.9 | 22.08 | 1222 | -- | -- |
| 47.87 | 0.322 | 11.3 | 0.801 | 0.56 | -0.666 | -- | -0.513 | 0.0835 | 16.3 | 21.75 | 1157 | -- | -- |
| 48.05 | 0.323 | 11.2 | 0.942 | 0.569 | -0.699 | -- | -- | 0.111 | 16.3 | 22.52 | 1164 | -- | -- |
| 64.32 | 0.374 | 11.3 | 0.852 | -- | -0.774 | -- | -0.398 | 0.0848 | -- | 22.9 | 1188 | -- | -- |
| 62.15 | 0.37 | 11.3 | 0.713 | 0.646 | -- | 0.641 | -- | -0.0305 | 15.5 | -- | -- | -- | -- |
| 63.38 | 0.373 | 11.3 | 0.724 | 0.652 | -- | -- | -- | -0.0266 | 15.7 | -- | -- | -- | -- |
| 64.41 | 0.374 | 11.2 | 0.961 | -- | -0.81 | -- | -- | 0.117 | -- | 23 | 1187 | -- | -- |
| 69.82 | 0.389 | 11.3 | -- | 0.571 | -0.475 | -- | -- | -0.0341 | 16.2 | 22.68 | 1144 | -- | -- |
| 86.95 | 0.436 | 11.3 | 0.697 | -- | -- | -- | -- | -0.044 | -- | -- | -- | -- | -- |
| 77.2 | 0.411 | 11.3 | -- | 0.638 | -- | -- | -- | -0.107 | 15.7 | -- | -- | -- | -- |
| 86.83 | 0.434 | 11.3 | -- | -- | -0.591 | -- | -- | -0.0478 | -- | 23.9 | 1184 | -- | -- |
| 99.76 | 0.466 | 11.3 | -- | -- | -- | -- | -- | -0.121 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.99 | temperature | 15 | 270 | > th | dose dependent | rect. | 14 | 16 |
| 7 | 46.55 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 17 |
| 8 | 46.56 | temperature | 20 | 720 | > th | dose dependent | rect. | 12 | 17 |
| 16 | 46.65 | temperature | 20 | 720 | > th | dose dependent | sin | 15 | NA |
| 100 | 47.39 | temperature | 20 | 90 | > th | dose dependent | rect. | 17 | 15 |
| 140 | 47.64 | atmosphere | 995 | 90 | > th | dose dependent | rect. | 19 | 8 |
| 161 | 47.73 | temperature | 20 | 10 | > th | dose dependent | rect. | 16 | 17 |
| 248 | 48.05 | temperature | 20 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 270 | 48.10 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 6 |
| 281 | 48.11 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 22 |
| 292 | 48.13 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 12 |
| 293 | 48.13 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 12 |
| 312 | 48.16 | temperature | 15 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 320 | 48.17 | temperature | 30 | 720 | < th | dose dependent | sin | 15 | NA |
| 436 | 48.27 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 22 |
| 450 | 48.29 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 500 | 48.31 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 536 | 48.33 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 23 |
| 539 | 48.34 | temperature | 30 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 574 | 48.36 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 6 |
| 584 | 48.37 | temperature | 30 | 4320 | < th | dose dependent | rect. | 18 | 4 |
| 593 | 48.37 | temperature | 20 | 10 | > th | dose dependent | rect. | 18 | 15 |
| 679 | 48.43 | temperature | 30 | 720 | < th | dose dependent | rect. | 14 | 17 |