Os02g0495900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0495900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 12.11 | 0.163 | 11.8 | 0.0967 | 0.282 | -0.19 | -0.216 | 0.351 | -0.249 | 3.02 | 90.77 | 15 | -- | -- |
| 12.2 | 0.164 | 11.8 | 0.111 | 0.304 | -0.178 | -0.0372 | -- | -0.248 | 3.03 | 88.32 | 28 | -- | -- |
| 12.18 | 0.164 | 11.8 | 0.109 | 0.299 | -0.192 | -- | 0.153 | -0.248 | 3.06 | 89.63 | 34 | -- | -- |
| 12.19 | 0.164 | 11.8 | 0.112 | 0.308 | -0.178 | -- | -- | -0.248 | 3.04 | 87.54 | 24 | -- | -- |
| 14.87 | 0.18 | 11.8 | 0.087 | -- | 0.128 | -- | -0.184 | -0.208 | -- | 64 | 154 | -- | -- |
| 13.02 | 0.169 | 11.8 | 0.0851 | 0.208 | -- | -0.137 | -- | -0.214 | 2.91 | -- | -- | -- | -- |
| 13.08 | 0.169 | 11.8 | 0.0883 | 0.208 | -- | -- | -- | -0.213 | 2.96 | -- | -- | -- | -- |
| 14.92 | 0.18 | 11.8 | 0.0926 | -- | 0.113 | -- | -- | -0.203 | -- | 64.47 | 153 | -- | -- |
| 12.51 | 0.165 | 11.8 | -- | 0.302 | -0.159 | -- | -- | -0.258 | 3.04 | 86.18 | 15 | -- | -- |
| 15.56 | 0.184 | 11.8 | 0.0971 | -- | -- | -- | -- | -0.208 | -- | -- | -- | -- | -- |
| 13.28 | 0.17 | 11.8 | -- | 0.21 | -- | -- | -- | -0.223 | 2.97 | -- | -- | -- | -- |
| 15.14 | 0.181 | 11.8 | -- | -- | 0.115 | -- | -- | -0.213 | -- | 64 | 153 | -- | -- |
| 15.81 | 0.186 | 11.8 | -- | -- | -- | -- | -- | -0.219 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 11.79 | wind | 1 | 4320 | < th | dose dependent | rect. | 20 | 3 |
| 3 | 11.82 | wind | 1 | 4320 | < th | dose dependent | rect. | 18 | 5 |
| 7 | 11.87 | wind | 1 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 8 | 11.88 | wind | 1 | 4320 | > th | dose independent | rect. | 20 | 3 |
| 13 | 11.93 | humidity | 50 | 10 | > th | dose dependent | rect. | 11 | 19 |
| 15 | 11.94 | humidity | 70 | 10 | > th | dose dependent | rect. | 11 | 19 |
| 22 | 11.97 | humidity | 80 | 10 | > th | dose dependent | rect. | 13 | 17 |
| 24 | 11.98 | wind | 1 | 4320 | < th | dose dependent | sin | 16 | NA |
| 33 | 11.99 | humidity | 70 | 270 | > th | dose dependent | rect. | 17 | 11 |
| 35 | 11.99 | humidity | 70 | 90 | > th | dose dependent | rect. | 11 | 18 |
| 53 | 12.02 | wind | 9 | 4320 | < th | dose independent | rect. | 1 | 5 |
| 54 | 12.02 | humidity | 90 | 270 | > th | dose independent | rect. | 16 | 12 |
| 78 | 12.04 | humidity | 90 | 90 | > th | dose dependent | rect. | 17 | 12 |
| 79 | 12.04 | wind | 1 | 4320 | < th | dose dependent | rect. | 14 | 14 |
| 109 | 12.06 | humidity | 90 | 270 | > th | dose independent | rect. | 23 | 4 |
| 111 | 12.06 | humidity | 90 | 270 | > th | dose independent | rect. | 21 | 7 |
| 113 | 12.06 | humidity | 90 | 270 | > th | dose independent | rect. | 12 | 16 |
| 117 | 12.06 | wind | 1 | 4320 | < th | dose dependent | rect. | 16 | 12 |
| 127 | 12.06 | humidity | 70 | 90 | > th | dose dependent | rect. | 13 | 16 |
| 149 | 12.07 | humidity | 90 | 10 | < th | dose independent | rect. | 20 | 15 |
| 150 | 12.07 | humidity | 90 | 30 | > th | dose dependent | sin | 9 | NA |
| 167 | 12.07 | humidity | 90 | 30 | > th | dose dependent | rect. | 13 | 21 |
| 213 | 12.09 | humidity | 90 | 90 | > th | dose independent | sin | 11 | NA |
| 214 | 12.09 | humidity | 90 | 90 | > th | dose independent | rect. | 23 | 6 |
| 221 | 12.09 | humidity | 90 | 90 | > th | dose dependent | rect. | 23 | 6 |
| 222 | 12.09 | wind | 1 | 4320 | < th | dose dependent | rect. | 18 | 10 |
| 269 | 12.10 | humidity | 80 | 720 | < th | dose independent | rect. | 12 | 4 |
| 331 | 12.11 | humidity | 90 | 270 | > th | dose dependent | rect. | 23 | 4 |
| 369 | 12.11 | humidity | 90 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 378 | 12.12 | humidity | 90 | 90 | > th | dose dependent | rect. | 21 | 8 |
| 416 | 12.12 | humidity | 90 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 430 | 12.13 | humidity | 90 | 270 | < th | dose independent | rect. | 17 | 15 |
| 433 | 12.13 | humidity | 90 | 90 | > th | dose independent | rect. | 17 | 17 |
| 438 | 12.13 | humidity | 90 | 10 | > th | dose dependent | no | NA | NA |
| 455 | 12.13 | humidity | 90 | 10 | > th | dose dependent | rect. | 19 | 19 |
| 563 | 12.15 | humidity | 90 | 90 | < th | dose independent | rect. | 13 | 22 |
| 565 | 12.15 | humidity | 50 | 10 | > th | dose dependent | sin | 10 | NA |
| 567 | 12.15 | radiation | 10 | 720 | < th | dose dependent | rect. | 16 | 3 |
| 569 | 12.15 | humidity | 90 | 720 | < th | dose dependent | rect. | 12 | 4 |
| 645 | 12.16 | humidity | 90 | 270 | > th | dose independent | rect. | 8 | 20 |
| 646 | 12.16 | humidity | 90 | 90 | > th | dose independent | rect. | 13 | 21 |
| 722 | 12.16 | humidity | 90 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 735 | 12.17 | temperature | 15 | 1440 | > th | dose independent | rect. | 6 | 12 |
| 743 | 12.17 | humidity | 80 | 720 | > th | dose independent | rect. | 24 | 19 |
| 804 | 12.18 | temperature | 15 | 1440 | > th | dose independent | rect. | 6 | 6 |
| 937 | 12.20 | wind | 1 | 4320 | < th | dose independent | sin | 15 | NA |
| 948 | 12.20 | temperature | 15 | 270 | > th | dose independent | rect. | 13 | 11 |
| 951 | 12.20 | temperature | 15 | 270 | > th | dose independent | rect. | 19 | 13 |
| 954 | 12.20 | radiation | 1 | 720 | > th | dose independent | rect. | 12 | 19 |
| 982 | 12.20 | humidity | 90 | 10 | > th | dose dependent | rect. | 23 | 15 |
| 983 | 12.20 | wind | 1 | 720 | < th | dose dependent | rect. | 8 | 16 |