Os02g0495400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Armadillo-like helical domain containing protein.
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Os02g0495400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Armadillo-like helical domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 41.86 | 0.304 | 9.84 | 0.432 | 1.17 | -1.14 | -0.593 | 2.68 | 0.0456 | 20.1 | 23.23 | 1174 | -- | -- |
| 42.92 | 0.305 | 9.86 | 0.259 | 1.06 | -1.23 | -0.373 | -- | 0.125 | 19.8 | 14.1 | 9893 | -- | -- |
| 42.61 | 0.304 | 9.86 | 0.367 | 1.16 | -1.13 | -- | 2.66 | -0.0488 | 20 | 24.69 | 1222 | -- | -- |
| 42.68 | 0.304 | 9.87 | 0.196 | 1.13 | -1.29 | -- | -- | 0.0893 | 19.7 | 13.48 | 9952 | -- | -- |
| 109.58 | 0.488 | 9.81 | 0.473 | -- | -1.06 | -- | 2.59 | 0.0285 | -- | 23.73 | 1375 | -- | -- |
| 70.78 | 0.394 | 9.96 | -0.571 | 1.12 | -- | -0.463 | -- | -0.322 | 19.5 | -- | -- | -- | -- |
| 71.37 | 0.396 | 9.96 | -0.559 | 1.12 | -- | -- | -- | -0.322 | 19.5 | -- | -- | -- | -- |
| 108.92 | 0.486 | 9.85 | 0.193 | -- | -1.32 | -- | -- | 0.0804 | -- | 12.2 | 10075 | -- | -- |
| 43.25 | 0.306 | 9.88 | -- | 1.12 | -1.19 | -- | -- | 0.0385 | 19.7 | 12.5 | 9813 | -- | -- |
| 138.45 | 0.55 | 9.94 | -0.577 | -- | -- | -- | -- | -0.34 | -- | -- | -- | -- | -- |
| 79.62 | 0.417 | 9.95 | -- | 1.13 | -- | -- | -- | -0.26 | 19.5 | -- | -- | -- | -- |
| 109.59 | 0.488 | 9.86 | -- | -- | -1.21 | -- | -- | 0.0266 | -- | 10.51 | 10083 | -- | -- |
| 147.22 | 0.566 | 9.92 | -- | -- | -- | -- | -- | -0.276 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 41.10 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 4 |
| 3 | 41.17 | temperature | 15 | 1440 | > th | dose dependent | rect. | 10 | 7 |
| 88 | 41.68 | temperature | 10 | 1440 | > th | dose dependent | sin | 22 | NA |
| 378 | 42.52 | temperature | 10 | 14400 | > th | dose dependent | rect. | 21 | 2 |
| 387 | 42.54 | temperature | 30 | 14400 | < th | dose dependent | rect. | 21 | 2 |
| 424 | 42.59 | temperature | 30 | 14400 | < th | dose dependent | rect. | 19 | 4 |
| 466 | 42.69 | temperature | 30 | 4320 | < th | dose dependent | rect. | 7 | 3 |
| 515 | 42.75 | temperature | 10 | 4320 | > th | dose dependent | rect. | 7 | 3 |
| 591 | 42.83 | temperature | 10 | 14400 | > th | dose dependent | sin | 15 | NA |
| 592 | 42.83 | temperature | 25 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 620 | 42.85 | temperature | 20 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 962 | 43.04 | temperature | 10 | 14400 | > th | dose dependent | no | NA | NA |
| 983 | 43.04 | temperature | 10 | 14400 | > th | dose dependent | rect. | 1 | 23 |
| 984 | 43.04 | temperature | 10 | 14400 | > th | dose dependent | rect. | 4 | 23 |
| 987 | 43.04 | temperature | 10 | 14400 | > th | dose dependent | rect. | 17 | 23 |
| 991 | 43.05 | temperature | 30 | 14400 | < th | dose dependent | sin | 13 | NA |