Os02g0491800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Germin-like protein subfamily 1 member 15 precursor.
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Os02g0491800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Germin-like protein subfamily 1 member 15 precursor.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53.86 | 0.345 | 2.93 | -0.0434 | 0.0876 | 0.345 | -0.187 | -1.32 | 0.0894 | 3.55 | 49.94 | 63 | -- | -- |
| 54.68 | 0.347 | 2.94 | -0.0585 | 0.0823 | 0.776 | -0.0588 | -- | 0.0877 | 4.37 | 52.18 | 58 | -- | -- |
| 52.47 | 0.34 | 2.93 | -0.0563 | 0.0829 | 0.423 | -- | -2.43 | 0.0931 | 4.08 | 50 | 63 | -- | -- |
| 54.68 | 0.347 | 2.94 | -0.0578 | 0.0818 | 0.78 | -- | -- | 0.088 | 4.2 | 52.28 | 58 | -- | -- |
| 52.83 | 0.34 | 2.93 | -0.0547 | -- | 0.389 | -- | -2.43 | 0.0943 | -- | 50 | 63 | -- | -- |
| 57.5 | 0.355 | 2.94 | -0.0947 | 0.0707 | -- | -0.158 | -- | 0.0653 | 7.35 | -- | -- | -- | -- |
| 57.55 | 0.355 | 2.94 | -0.0987 | 0.0723 | -- | -- | -- | 0.0653 | 6.71 | -- | -- | -- | -- |
| 55.01 | 0.347 | 2.94 | -0.0558 | -- | 0.759 | -- | -- | 0.0893 | -- | 52.51 | 63 | -- | -- |
| 54.76 | 0.347 | 2.93 | -- | 0.0812 | 0.8 | -- | -- | 0.0949 | 4.17 | 52.34 | 63 | -- | -- |
| 57.83 | 0.355 | 2.94 | -0.0971 | -- | -- | -- | -- | 0.0667 | -- | -- | -- | -- | -- |
| 57.81 | 0.356 | 2.94 | -- | 0.0711 | -- | -- | -- | 0.0763 | 6.79 | -- | -- | -- | -- |
| 54.94 | 0.346 | 2.93 | -- | -- | 0.86 | -- | -- | 0.0955 | -- | 54.16 | 63 | -- | -- |
| 58.08 | 0.356 | 2.94 | -- | -- | -- | -- | -- | 0.0775 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 50.44 | humidity | 50.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 2 | 50.86 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 21 | 5 |
| 11 | 51.15 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 15 | 51.17 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 25 | 51.17 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 35 | 51.18 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 20 | 10 |
| 43 | 51.58 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 45 | 51.73 | radiation | 1.0 | 270 | < th | dose independent | rect. | 8 | 1 |
| 46 | 51.73 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 50 | 51.92 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 55 | 52.33 | humidity | 50.0 | 10 | > th | dose independent | sin | 7 | NA |
| 58 | 52.40 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 2 | 1 |
| 61 | 52.47 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 62 | 52.47 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 65 | 52.48 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 66 | 52.48 | temperature | 25.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 69 | 52.48 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 77 | 52.50 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 79 | 52.50 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 80 | 52.50 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 82 | 52.50 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 86 | 52.50 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 90 | 52.50 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 93 | 52.50 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 102 | 52.50 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 104 | 52.50 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 105 | 52.50 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 107 | 52.50 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 112 | 52.50 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 132 | 52.50 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 133 | 52.50 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 134 | 52.50 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 137 | 52.50 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 142 | 52.50 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 156 | 52.50 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 157 | 52.51 | wind | 7.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 161 | 52.52 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 164 | 52.53 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 165 | 52.54 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 167 | 52.55 | temperature | 25.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 168 | 52.55 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 230 | 52.73 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 231 | 52.73 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 243 | 52.90 | wind | 9.0 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 249 | 53.07 | humidity | 60.0 | 270 | < th | dose independent | rect. | 10 | 1 |
| 250 | 53.11 | humidity | 60.0 | 270 | > th | dose independent | rect. | 3 | 12 |
| 252 | 53.15 | atmosphere | 1010.0 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 295 | 53.30 | radiation | 40.0 | 270 | > th | dose independent | rect. | 10 | 1 |
| 325 | 53.38 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 326 | 53.39 | radiation | 40.0 | 270 | > th | dose dependent | rect. | 10 | 1 |
| 371 | 53.43 | atmosphere | 1010.0 | 30 | > th | dose dependent | sin | 0 | NA |
| 603 | 53.55 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 615 | 53.59 | wind | 9.0 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 617 | 53.62 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 9 | 3 |
| 620 | 53.63 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 621 | 53.63 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 9 | 3 |
| 635 | 53.65 | wind | 9.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 636 | 53.65 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 641 | 53.65 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 9 | 3 |
| 719 | 53.72 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 4 | 8 |
| 720 | 53.72 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 9 | 2 |
| 738 | 53.74 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 3 | 8 |
| 740 | 53.75 | humidity | 60.0 | 720 | > th | dose independent | rect. | 3 | 8 |
| 747 | 53.75 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 22 | 13 |
| 749 | 53.76 | radiation | 40.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 867 | 53.78 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 21 | 15 |
| 873 | 53.79 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 877 | 53.79 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 927 | 53.79 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 23 | 13 |
| 931 | 53.79 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 936 | 53.79 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |