Os02g0491700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Germin family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0491700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Germin family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 169.65 | 0.612 | 3.07 | -0.0832 | 0.325 | -4.07 | -1.33 | -5.89 | -0.141 | 8.57 | 9.1 | 19 | -- | -- |
| 171.67 | 0.61 | 3.06 | -0.104 | 0.372 | -2.66 | -1.44 | -- | -0.148 | 8.38 | 9.14 | 18 | -- | -- |
| 175.25 | 0.617 | 3.07 | -0.13 | 0.328 | -3.72 | -- | -4.64 | -0.139 | 8.85 | 9.137 | 18 | -- | -- |
| 176.2 | 0.618 | 3.05 | -0.156 | 0.352 | -2.56 | -- | -- | -0.166 | 9.12 | 8.996 | 18 | -- | -- |
| 181.36 | 0.627 | 3.07 | -0.126 | -- | -3.83 | -- | -4.85 | -0.136 | -- | 9.107 | 18 | -- | -- |
| 184.33 | 0.636 | 3.06 | -0.249 | 0.343 | -- | -1.18 | -- | -0.187 | 9.43 | -- | -- | -- | -- |
| 189.42 | 0.645 | 3.06 | -0.291 | 0.347 | -- | -- | -- | -0.188 | 9.69 | -- | -- | -- | -- |
| 182.56 | 0.629 | 3.06 | -0.155 | -- | -2.57 | -- | -- | -0.135 | -- | 8.924 | 18 | -- | -- |
| 176.69 | 0.619 | 3.05 | -- | 0.337 | -2.64 | -- | -- | -0.119 | 8.87 | 8.928 | 18 | -- | -- |
| 196.55 | 0.655 | 3.07 | -0.294 | -- | -- | -- | -- | -0.187 | -- | -- | -- | -- | -- |
| 191.65 | 0.648 | 3.05 | -- | 0.347 | -- | -- | -- | -0.155 | 9.75 | -- | -- | -- | -- |
| 183.18 | 0.63 | 3.06 | -- | -- | -2.67 | -- | -- | -0.117 | -- | 8.959 | 18 | -- | -- |
| 198.83 | 0.658 | 3.06 | -- | -- | -- | -- | -- | -0.155 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 162.00 | wind | 9.0 | 30 | > th | dose dependent | rect. | 1 | 11 |
| 9 | 162.34 | wind | 9.0 | 30 | > th | dose dependent | rect. | 11 | 1 |
| 30 | 163.16 | wind | 9.0 | 30 | > th | dose independent | rect. | 11 | 1 |
| 38 | 163.55 | wind | 9.0 | 30 | > th | dose independent | rect. | 1 | 11 |
| 48 | 164.15 | wind | 9.0 | 30 | > th | dose dependent | sin | 7 | NA |
| 111 | 166.17 | wind | 9.0 | 30 | > th | dose independent | sin | 6 | NA |
| 115 | 166.35 | wind | 9.0 | 30 | < th | dose independent | sin | 4 | NA |
| 180 | 168.99 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 18 | 2 |
| 181 | 168.99 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 18 | 2 |
| 324 | 171.37 | humidity | 70.0 | 90 | < th | dose independent | rect. | 18 | 1 |
| 390 | 171.86 | temperature | 20.0 | 720 | > th | dose independent | rect. | 22 | 8 |
| 405 | 171.96 | wind | 1.0 | 10 | < th | dose dependent | rect. | 1 | 3 |
| 436 | 172.18 | temperature | 20.0 | 270 | < th | dose independent | rect. | 4 | 4 |
| 449 | 172.32 | temperature | 20.0 | 720 | < th | dose independent | rect. | 22 | 7 |
| 451 | 172.33 | wind | 9.0 | 30 | > th | dose independent | rect. | 11 | 15 |
| 461 | 172.36 | wind | 1.0 | 270 | < th | dose dependent | rect. | 6 | 2 |
| 478 | 172.43 | wind | 1.0 | 90 | < th | dose independent | rect. | 7 | 3 |
| 538 | 172.79 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 559 | 172.92 | wind | 9.0 | 30 | < th | dose independent | no | NA | NA |
| 567 | 172.98 | wind | 9.0 | 30 | > th | dose independent | no | NA | NA |
| 614 | 172.99 | temperature | 20.0 | 270 | < th | dose independent | rect. | 5 | 1 |
| 621 | 173.06 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 23 | 3 |
| 635 | 173.13 | temperature | 20.0 | 720 | < th | dose independent | rect. | 1 | 4 |
| 645 | 173.25 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 21 | 10 |
| 652 | 173.34 | radiation | 10.0 | 10 | < th | dose independent | rect. | 12 | 1 |
| 678 | 173.46 | temperature | 20.0 | 720 | < th | dose independent | rect. | 3 | 2 |
| 761 | 173.75 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 4 | 5 |
| 785 | 173.91 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 21 | 8 |
| 786 | 173.93 | temperature | 20.0 | 720 | > th | dose independent | sin | 9 | NA |
| 789 | 173.94 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 791 | 173.94 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 795 | 173.98 | wind | 1.0 | 1440 | > th | dose independent | rect. | 20 | 2 |
| 811 | 174.04 | humidity | 50.0 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 861 | 174.14 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 23 | 1 |
| 863 | 174.14 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 880 | 174.21 | wind | 1.0 | 270 | < th | dose dependent | rect. | 4 | 4 |
| 887 | 174.24 | wind | 1.0 | 10 | < th | dose dependent | rect. | 1 | 1 |
| 910 | 174.30 | wind | 9.0 | 30 | > th | dose dependent | rect. | 11 | 15 |
| 927 | 174.31 | temperature | 20.0 | 720 | < th | dose independent | sin | 9 | NA |
| 934 | 174.36 | temperature | 20.0 | 720 | > th | dose independent | rect. | 24 | 1 |
| 941 | 174.39 | wind | 1.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 973 | 174.47 | temperature | 20.0 | 720 | > th | dose independent | rect. | 4 | 1 |
| 980 | 174.50 | temperature | 15.0 | 270 | > th | dose dependent | sin | 7 | NA |
| 988 | 174.52 | wind | 9.0 | 30 | > th | dose dependent | no | NA | NA |