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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0491300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.97 (0.0381) R2 : 0.0268
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.285 (0.0803) R2dN8 : 0.0346 R2N8 : 0.0268
σ : 0.718
deviance : 236.61
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
227.67 0.709 2.94 0.134 0.695 -0.574 -1.59 1.61 0.314 11.3 0.8 8 -- --
228.26 0.704 2.95 -0.0203 0.683 -0.583 0.166 -- 0.291 11.5 0.8846 57 -- --
227.84 0.708 2.95 0.0577 0.616 -0.504 -- 0.364 0.297 10.9 0.7199 7 -- --
228.38 0.704 2.95 -0.00243 0.698 -0.587 -- -- 0.304 11.4 0.89 57 -- --
234.09 0.716 2.97 0.0255 -- -0.114 -- 0.389 0.29 -- 0.78 6 -- --
235.36 0.719 2.96 0.00329 0.109 -- 0.489 -- 0.285 6.85 -- -- -- --
235.94 0.719 2.96 0.011 0.113 -- -- -- 0.284 6.1 -- -- -- --
235.11 0.717 2.97 0.0181 -- -0.114 -- -- 0.286 -- 0.3843 6 -- --
228.31 0.704 2.95 -- 0.767 -0.645 -- -- 0.307 11.6 0.88 58 -- --
236.61 0.719 2.97 0.0142 -- -- -- -- 0.286 -- -- -- -- --
235.94 0.719 2.97 -- 0.113 -- -- -- 0.282 6.09 -- -- -- --
235.12 0.716 2.97 -- -- -0.114 -- -- 0.284 -- 0.3843 6 -- --
236.61 0.718 2.97 -- -- -- -- -- 0.285 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 221.58 precipitation 0.1 720 < th dose independent rect. 19 22
2 221.58 precipitation 0.1 720 < th dose dependent rect. 19 22
3 221.66 precipitation 0.1 720 < th dose independent rect. 2 15
4 221.66 precipitation 0.1 720 < th dose dependent rect. 2 15
5 221.67 wind 1.0 90 < th dose dependent rect. 24 1
6 222.58 precipitation 0.1 720 < th dose independent rect. 19 13
7 222.58 precipitation 0.1 720 < th dose dependent rect. 19 13
8 222.60 precipitation 0.1 720 < th dose independent rect. 5 18
9 222.60 precipitation 0.1 720 < th dose dependent rect. 5 18
10 222.89 temperature 20.0 10 < th dose independent rect. 19 1
14 222.97 temperature 20.0 10 < th dose dependent rect. 20 1
22 223.10 humidity 90.0 90 > th dose independent rect. 18 1
26 223.14 humidity 90.0 90 > th dose dependent rect. 18 1
30 223.22 radiation 1.0 1440 < th dose independent rect. 11 1
31 223.22 radiation 1.0 1440 < th dose dependent rect. 11 1
42 223.48 precipitation 0.1 720 < th dose independent rect. 12 19
43 223.48 precipitation 0.1 720 < th dose dependent rect. 12 19
44 223.81 radiation 1.0 720 < th dose dependent rect. 23 20
46 224.03 precipitation 0.1 720 < th dose independent rect. 20 11
47 224.03 precipitation 0.1 720 < th dose dependent rect. 20 11
48 224.04 precipitation 0.1 720 < th dose independent rect. 11 21
49 224.04 precipitation 0.1 720 < th dose dependent rect. 11 21
50 224.17 radiation 1.0 720 < th dose dependent rect. 23 7
52 224.38 wind 1.0 720 > th dose independent rect. 8 11
56 224.44 precipitation 0.1 720 < th dose independent rect. 5 9
57 224.44 precipitation 0.1 720 < th dose dependent rect. 5 9
58 224.45 wind 1.0 90 < th dose independent rect. 24 1
67 224.68 precipitation 0.1 720 < th dose independent rect. 11 6
69 224.68 precipitation 0.1 720 < th dose dependent rect. 11 6
70 224.79 radiation 20.0 720 < th dose dependent rect. 17 2
82 225.25 temperature 15.0 720 > th dose independent rect. 5 2
84 225.31 radiation 1.0 720 < th dose independent rect. 23 7
85 225.32 precipitation 0.1 720 < th dose independent rect. 5 2
86 225.32 precipitation 0.1 720 < th dose dependent rect. 5 2
87 225.33 radiation 10.0 90 < th dose dependent rect. 17 12
88 225.34 radiation 1.0 90 < th dose dependent rect. 23 23
89 225.35 wind 9.0 720 < th dose independent rect. 19 13
90 225.40 humidity 60.0 720 > th dose independent rect. 19 14
91 225.42 wind 9.0 720 < th dose independent rect. 20 11
92 225.42 radiation 1.0 4320 < th dose dependent rect. 23 2
93 225.44 humidity 80.0 10 > th dose independent rect. 9 2
94 225.49 temperature 10.0 720 > th dose independent rect. 23 6
95 225.49 temperature 30.0 720 < th dose independent rect. 23 6
96 225.49 humidity 50.0 720 > th dose independent rect. 23 6
99 225.49 atmosphere 995.0 720 > th dose independent rect. 23 6
100 225.49 radiation 20.0 720 < th dose independent rect. 23 6
103 225.49 temperature 10.0 720 > th dose independent rect. 8 11
104 225.49 atmosphere 1015.0 720 < th dose independent rect. 8 11
105 225.49 temperature 10.0 720 > th dose independent rect. 19 13
106 225.49 temperature 30.0 720 < th dose independent rect. 19 13
108 225.49 atmosphere 995.0 720 > th dose independent rect. 19 13
109 225.49 temperature 10.0 720 > th dose independent rect. 5 18
110 225.50 wind 9.0 720 < th dose independent rect. 23 6
111 225.50 temperature 10.0 720 > th dose independent rect. 11 6
112 225.50 atmosphere 1015.0 720 < th dose independent rect. 11 6
113 225.50 temperature 10.0 720 > th dose independent rect. 17 18
114 225.50 radiation 1.0 720 < th dose independent rect. 24 19
115 225.52 radiation 40.0 720 < th dose dependent rect. 23 6
118 225.54 temperature 10.0 720 > th dose independent rect. 20 11
119 225.54 temperature 30.0 720 < th dose independent rect. 20 11
120 225.54 humidity 50.0 720 > th dose independent rect. 20 11
122 225.54 atmosphere 995.0 720 > th dose independent rect. 20 11
123 225.54 radiation 40.0 720 < th dose independent rect. 20 11
124 225.54 temperature 10.0 720 > th dose independent rect. 7 13
125 225.54 atmosphere 1015.0 720 < th dose independent rect. 7 13
129 225.56 temperature 10.0 720 > th dose independent rect. 5 9
130 225.56 atmosphere 995.0 720 > th dose independent rect. 5 9
131 225.56 atmosphere 1015.0 720 < th dose independent rect. 5 9
132 225.56 temperature 10.0 720 > th dose independent rect. 14 15
134 225.65 wind 3.0 30 < th dose dependent rect. 20 1
138 225.70 radiation 1.0 90 < th dose independent rect. 23 23
139 225.72 wind 7.0 720 < th dose independent rect. 5 2
142 225.72 temperature 30.0 720 < th dose independent rect. 5 2
143 225.72 humidity 50.0 720 > th dose independent rect. 5 2
145 225.72 atmosphere 995.0 720 > th dose independent rect. 5 2
146 225.72 atmosphere 1015.0 720 < th dose independent rect. 5 2
147 225.72 radiation 40.0 720 < th dose independent rect. 5 2
148 225.72 temperature 10.0 720 > th dose independent rect. 7 22
154 225.76 temperature 10.0 720 > th dose independent rect. 17 9
155 225.76 radiation 30.0 720 < th dose independent rect. 17 9
157 225.76 wind 1.0 720 > th dose independent rect. 11 14
158 225.76 temperature 10.0 720 > th dose independent rect. 2 15
160 225.77 radiation 40.0 720 < th dose independent rect. 19 13
161 225.78 temperature 10.0 720 > th dose independent rect. 17 2
162 225.78 atmosphere 1015.0 720 < th dose independent rect. 17 2
163 225.78 radiation 30.0 720 < th dose independent rect. 17 2
165 225.78 temperature 10.0 720 > th dose independent rect. 19 22
166 225.81 humidity 50.0 720 > th dose independent rect. 5 9
177 225.92 precipitation 0.1 720 < th dose independent rect. 19 5
178 225.92 precipitation 0.1 720 < th dose dependent rect. 19 5
181 225.95 humidity 50.0 720 > th dose independent rect. 17 2
182 225.95 radiation 40.0 720 < th dose dependent rect. 17 9
186 225.97 radiation 1.0 720 < th dose dependent rect. 18 1
188 226.01 wind 1.0 720 > th dose independent rect. 19 6
189 226.03 wind 9.0 720 < th dose independent rect. 17 2
192 226.09 precipitation 0.1 720 < th dose independent rect. 11 13
193 226.09 precipitation 0.1 720 < th dose dependent rect. 11 13
196 226.13 precipitation 0.1 720 < th dose independent rect. 12 11
197 226.13 precipitation 0.1 720 < th dose dependent rect. 12 11
199 226.14 radiation 10.0 90 < th dose independent rect. 17 12
200 226.14 temperature 15.0 90 > th dose independent rect. 5 13
202 226.17 radiation 1.0 10 < th dose dependent rect. 24 22
204 226.20 precipitation 0.1 720 < th dose independent rect. 3 21
205 226.20 precipitation 0.1 720 < th dose dependent rect. 3 21
206 226.21 wind 9.0 720 < th dose independent rect. 17 18
211 226.25 wind 1.0 90 > th dose independent rect. 5 13
222 226.36 radiation 1.0 720 > th dose independent rect. 12 19
226 226.39 radiation 1.0 720 < th dose dependent rect. 23 13
234 226.42 radiation 1.0 720 < th dose dependent rect. 23 10
237 226.43 radiation 1.0 10 < th dose independent rect. 24 22
250 226.49 atmosphere 995.0 720 > th dose independent rect. 17 18
252 226.50 wind 1.0 720 > th dose independent rect. 7 4
265 226.54 humidity 50.0 90 > th dose independent rect. 17 12
275 226.61 precipitation 0.1 90 < th dose independent rect. 5 13
276 226.61 precipitation 0.1 90 < th dose dependent rect. 5 13
283 226.68 precipitation 0.1 720 < th dose independent rect. 7 13
285 226.68 precipitation 0.1 720 < th dose dependent rect. 7 13
290 226.72 precipitation 0.1 720 < th dose independent rect. 8 11
291 226.72 precipitation 0.1 720 < th dose dependent rect. 8 11
294 226.73 humidity 50.0 10 > th dose dependent rect. 8 21
295 226.74 atmosphere 995.0 90 > th dose independent rect. 18 11
304 226.76 wind 1.0 720 > th dose independent rect. 11 6
310 226.76 wind 9.0 270 < th dose independent rect. 7 12
312 226.76 atmosphere 1015.0 90 < th dose independent rect. 5 13
314 226.77 precipitation 0.1 720 < th dose independent rect. 20 18
318 226.77 precipitation 0.1 720 < th dose dependent rect. 20 18
319 226.78 atmosphere 995.0 720 > th dose independent rect. 17 2
330 226.82 wind 9.0 90 < th dose independent rect. 5 13
332 226.84 humidity 50.0 90 > th dose dependent rect. 8 21
334 226.86 humidity 50.0 90 > th dose independent rect. 8 13
335 226.87 precipitation 0.1 720 < th dose independent rect. 2 6
338 226.87 precipitation 0.1 720 < th dose dependent rect. 2 6
339 226.88 wind 9.0 720 < th dose independent rect. 19 5
343 226.90 atmosphere 1015.0 720 < th dose independent rect. 2 15
347 226.93 wind 9.0 720 < th dose independent rect. 17 9
351 226.97 temperature 10.0 720 > th dose independent rect. 19 5
352 226.97 temperature 30.0 720 < th dose independent rect. 19 5
353 226.97 humidity 50.0 720 > th dose independent rect. 19 5
354 226.97 atmosphere 995.0 720 > th dose independent rect. 19 5
355 226.97 radiation 1.0 720 < th dose independent rect. 19 5
362 226.97 temperature 10.0 720 > th dose independent rect. 24 19
364 226.97 radiation 1.0 720 < th dose dependent rect. 19 5
373 226.99 temperature 10.0 720 > th dose independent rect. 7 5
374 226.99 atmosphere 995.0 720 > th dose independent rect. 7 5
375 226.99 atmosphere 1015.0 720 < th dose independent rect. 7 5
376 226.99 temperature 10.0 720 > th dose independent rect. 12 19
379 227.03 humidity 50.0 720 > th dose independent rect. 17 18
384 227.06 temperature 20.0 10 < th dose dependent rect. 12 9
385 227.06 humidity 50.0 90 > th dose dependent rect. 17 12
390 227.08 humidity 60.0 720 > th dose independent rect. 7 4
393 227.09 radiation 1.0 10 < th dose independent rect. 18 18
399 227.11 wind 9.0 720 < th dose independent rect. 7 5
406 227.14 wind 1.0 90 > th dose independent rect. 21 11
407 227.15 wind 1.0 720 > th dose independent rect. 17 2
411 227.18 precipitation 0.1 720 < th dose independent rect. 17 2
412 227.18 atmosphere 995.0 720 > th dose independent rect. 17 9
414 227.18 precipitation 0.1 720 < th dose dependent rect. 17 2
429 227.22 precipitation 0.1 720 < th dose independent rect. 7 5
430 227.22 humidity 50.0 90 > th dose independent rect. 7 22
431 227.22 precipitation 0.1 720 < th dose dependent rect. 7 5
434 227.23 temperature 20.0 10 < th dose dependent rect. 16 5
438 227.24 radiation 40.0 90 < th dose independent rect. 12 12
448 227.29 wind 9.0 720 < th dose independent rect. 5 9
473 227.38 humidity 80.0 1440 > th dose independent rect. 11 1
474 227.38 radiation 1.0 90 < th dose independent rect. 17 19
484 227.41 radiation 40.0 720 < th dose dependent rect. 20 11
486 227.42 atmosphere 995.0 720 > th dose independent rect. 8 11
503 227.47 humidity 80.0 1440 < th dose independent rect. 11 1
504 227.47 atmosphere 995.0 720 > th dose independent rect. 7 13
505 227.47 radiation 1.0 90 < th dose dependent rect. 17 19
508 227.49 wind 9.0 720 < th dose independent rect. 20 3
510 227.51 radiation 1.0 720 > th dose independent rect. 5 2
512 227.52 temperature 10.0 720 > th dose independent rect. 8 3
513 227.52 atmosphere 995.0 720 > th dose independent rect. 8 3
514 227.52 atmosphere 1015.0 720 < th dose independent rect. 8 3
516 227.52 temperature 10.0 720 > th dose independent rect. 11 21
517 227.52 humidity 80.0 10 > th dose dependent rect. 10 1
521 227.53 temperature 20.0 720 > th dose independent rect. 11 6
546 227.59 wind 9.0 720 < th dose independent rect. 8 3
547 227.59 precipitation 0.1 720 < th dose independent rect. 23 6
550 227.59 precipitation 0.1 720 < th dose dependent rect. 23 6
553 227.60 atmosphere 995.0 90 > th dose independent rect. 5 13
555 227.60 wind 9.0 720 < th dose independent rect. 19 22
559 227.61 temperature 10.0 720 > th dose independent rect. 20 3
560 227.61 temperature 30.0 720 < th dose independent rect. 20 3
561 227.61 humidity 50.0 720 > th dose independent rect. 20 3
564 227.61 atmosphere 995.0 720 > th dose independent rect. 20 3
565 227.61 radiation 1.0 720 < th dose independent rect. 20 3
572 227.61 temperature 10.0 720 > th dose independent rect. 23 21
575 227.61 radiation 1.0 720 < th dose dependent rect. 20 3
599 227.65 humidity 60.0 10 > th dose independent rect. 18 12
610 227.67 humidity 60.0 14400 > th dose independent rect. 7 1
613 227.67 radiation 1.0 90 < th dose independent rect. 10 20
614 227.67 humidity 90.0 30 > th dose dependent rect. 11 10
630 227.70 radiation 1.0 10 < th dose dependent rect. 18 18
632 227.71 precipitation 0.1 720 < th dose independent rect. 8 3
638 227.71 precipitation 0.1 720 < th dose dependent rect. 8 3
640 227.72 wind 9.0 720 < th dose independent rect. 11 6
647 227.73 humidity 80.0 10 > th dose independent rect. 9 12
649 227.73 atmosphere 1000.0 270 > th dose independent rect. 23 12
652 227.74 radiation 1.0 10 < th dose independent rect. 16 20
665 227.76 radiation 30.0 270 < th dose independent rect. 15 12
671 227.78 humidity 50.0 720 > th dose independent rect. 17 9
704 227.82 precipitation 0.1 720 < th dose independent rect. 17 9
707 227.82 precipitation 0.1 720 < th dose dependent rect. 17 9
710 227.83 atmosphere 1000.0 720 > th dose independent rect. 23 4
713 227.84 humidity 60.0 270 > th dose independent rect. 23 12
721 227.86 precipitation 0.1 270 < th dose independent rect. 3 12
724 227.86 precipitation 0.1 270 < th dose dependent rect. 3 12
727 227.86 radiation 1.0 10 < th dose dependent rect. 16 20
735 227.88 wind 9.0 720 < th dose dependent rect. 20 3
737 227.88 temperature 10.0 10 > th dose dependent rect. 5 19
764 227.94 wind 9.0 720 < th dose independent rect. 12 19
771 227.95 atmosphere 995.0 720 > th dose independent rect. 11 6
812 228.01 precipitation 0.1 720 < th dose independent rect. 14 15
818 228.01 precipitation 0.1 720 < th dose dependent rect. 14 15
829 228.02 radiation 1.0 90 > th dose independent rect. 4 14
841 228.02 radiation 1.0 4320 < th dose dependent rect. 16 1
844 228.03 precipitation 0.1 90 < th dose independent rect. 21 11
845 228.03 wind 5.0 90 < th dose dependent rect. 5 2
847 228.03 humidity 50.0 10 > th dose dependent rect. 18 11
848 228.03 precipitation 0.1 90 < th dose dependent rect. 21 11
873 228.06 temperature 30.0 10 < th dose independent rect. 18 11
877 228.07 wind 7.0 90 < th dose independent rect. 21 11
885 228.08 radiation 1.0 10 < th dose independent rect. 11 19
889 228.08 humidity 50.0 90 > th dose dependent rect. 8 13
891 228.09 temperature 10.0 720 > th dose independent rect. 24 11
895 228.09 temperature 10.0 720 > th dose independent rect. 11 13
911 228.10 radiation 1.0 90 < th dose dependent rect. 10 20
913 228.11 wind 3.0 90 < th dose independent rect. 5 2
916 228.11 wind 9.0 720 < th dose independent rect. 24 11
918 228.11 temperature 15.0 270 > th dose independent rect. 3 12
920 228.11 humidity 50.0 270 > th dose independent rect. 3 12
931 228.12 wind 1.0 270 > th dose independent rect. 19 12
944 228.13 atmosphere 1015.0 720 < th dose independent rect. 3 5
945 228.13 atmosphere 995.0 4320 > th dose independent rect. 7 6
946 228.13 temperature 10.0 720 > th dose independent rect. 12 11
947 228.13 temperature 10.0 720 > th dose independent rect. 23 13
965 228.15 humidity 60.0 720 > th dose independent rect. 24 10
967 228.15 wind 9.0 270 < th dose independent rect. 15 12
980 228.16 wind 9.0 10 < th dose independent rect. 5 13
990 228.17 atmosphere 995.0 4320 > th dose independent rect. 9 4
996 228.17 atmosphere 1005.0 90 > th dose dependent rect. 5 2