Os02g0486500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transferase family protein.
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Os02g0486500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Transferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 149.68 | 0.575 | 5.98 | 1.32 | 0.83 | -0.999 | 0.992 | 1.22 | 0.0416 | 8.38 | 21.3 | 738 | -- | -- |
| 153.62 | 0.577 | 6.01 | 1.09 | 0.837 | -1.07 | 0.677 | -- | -0.0219 | 8.31 | 21.4 | 823 | -- | -- |
| 151.57 | 0.573 | 5.98 | 1.31 | 0.845 | -0.92 | -- | 1.02 | 0.0583 | 8.25 | 22.2 | 841 | -- | -- |
| 154.25 | 0.578 | 6.01 | 1.07 | 0.832 | -1.07 | -- | -- | -0.016 | 8.28 | 21.3 | 813 | -- | -- |
| 188.2 | 0.639 | 5.98 | 1.37 | -- | -1.11 | -- | 1.06 | 0.156 | -- | 22.3 | 763 | -- | -- |
| 192.67 | 0.651 | 6.07 | 0.642 | 1.01 | -- | 0.489 | -- | -0.314 | 8.62 | -- | -- | -- | -- |
| 193.45 | 0.651 | 6.07 | 0.658 | 1 | -- | -- | -- | -0.314 | 8.64 | -- | -- | -- | -- |
| 190.88 | 0.643 | 6.01 | 1.08 | -- | -1.19 | -- | -- | 0.0634 | -- | 21.9 | 774 | -- | -- |
| 177.67 | 0.621 | 6.04 | -- | 0.873 | -0.747 | -- | -- | -0.156 | 8.3 | 22.32 | 788 | -- | -- |
| 250.37 | 0.739 | 6.1 | 0.661 | -- | -- | -- | -- | -0.305 | -- | -- | -- | -- | -- |
| 204.86 | 0.67 | 6.09 | -- | 1.01 | -- | -- | -- | -0.387 | 8.59 | -- | -- | -- | -- |
| 217.9 | 0.688 | 6.05 | -- | -- | -0.938 | -- | -- | -0.0971 | -- | 22.26 | 763 | -- | -- |
| 261.89 | 0.755 | 6.11 | -- | -- | -- | -- | -- | -0.378 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 148.61 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 17 | 16 |
| 7 | 149.14 | temperature | 25.0 | 720 | < th | dose dependent | sin | 10 | NA |
| 14 | 149.47 | temperature | 15.0 | 270 | > th | dose dependent | sin | 7 | NA |
| 31 | 150.62 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 40 | 150.95 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 47 | 151.27 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 9 |
| 49 | 151.34 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 51 | 151.40 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 54 | 151.45 | temperature | 15.0 | 720 | > th | dose dependent | sin | 10 | NA |
| 56 | 151.49 | temperature | 20.0 | 720 | > th | dose independent | rect. | 19 | 16 |
| 59 | 151.55 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 66 | 151.64 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 13 |
| 70 | 151.70 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 8 |
| 83 | 151.98 | temperature | 20.0 | 720 | > th | dose independent | sin | 10 | NA |
| 87 | 152.00 | temperature | 20.0 | 720 | > th | dose independent | rect. | 19 | 18 |
| 93 | 152.09 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 11 | 4 |
| 100 | 152.30 | temperature | 20.0 | 720 | < th | dose independent | sin | 10 | NA |
| 116 | 152.55 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 11 | 5 |
| 117 | 152.55 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 118 | 152.56 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 11 | 4 |
| 124 | 152.65 | temperature | 20.0 | 720 | > th | dose independent | rect. | 17 | 18 |
| 133 | 152.77 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 12 | 3 |
| 139 | 152.91 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 23 | 6 |
| 140 | 152.92 | temperature | 20.0 | 720 | < th | dose independent | rect. | 19 | 15 |
| 141 | 152.93 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 12 | 2 |
| 146 | 152.97 | temperature | 20.0 | 720 | > th | dose independent | rect. | 21 | 10 |
| 151 | 153.02 | temperature | 20.0 | 720 | > th | dose independent | rect. | 19 | 12 |
| 154 | 153.06 | temperature | 20.0 | 720 | < th | dose independent | rect. | 21 | 10 |
| 158 | 153.07 | temperature | 20.0 | 720 | > th | dose independent | rect. | 17 | 20 |
| 191 | 153.28 | temperature | 20.0 | 720 | > th | dose independent | rect. | 15 | 20 |
| 192 | 153.29 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 22 | 1 |
| 195 | 153.31 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 207 | 153.40 | temperature | 20.0 | 720 | > th | dose independent | rect. | 15 | 22 |
| 213 | 153.45 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 220 | 153.51 | temperature | 20.0 | 720 | > th | dose independent | rect. | 19 | 21 |
| 231 | 153.55 | temperature | 20.0 | 720 | > th | dose independent | rect. | 19 | 23 |
| 246 | 153.64 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 260 | 153.68 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 15 | 14 |
| 264 | 153.69 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 13 |
| 291 | 153.83 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 23 | 14 |
| 318 | 153.93 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 326 | 153.99 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 23 | 20 |
| 342 | 154.04 | temperature | 20.0 | 720 | > th | dose independent | rect. | 8 | 23 |
| 350 | 154.07 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 12 | 20 |
| 352 | 154.08 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 353 | 154.08 | temperature | 20.0 | 720 | > th | dose independent | rect. | 12 | 23 |
| 385 | 154.21 | temperature | 25.0 | 720 | < th | dose dependent | no | NA | NA |
| 398 | 154.25 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 9 |
| 421 | 154.33 | humidity | 90.0 | 14400 | > th | dose independent | sin | 13 | NA |
| 441 | 154.39 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 452 | 154.42 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 470 | 154.49 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 13 |
| 476 | 154.50 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 17 | 11 |
| 524 | 154.60 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 14 |
| 539 | 154.63 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 579 | 154.70 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 5 | NA |
| 622 | 154.80 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 659 | 154.85 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 16 | 23 |
| 665 | 154.87 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 9 | 7 |
| 696 | 154.91 | humidity | 90.0 | 14400 | > th | dose dependent | no | NA | NA |
| 697 | 154.91 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 699 | 154.92 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 9 | 7 |
| 706 | 154.93 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 22 | 1 |
| 714 | 154.94 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 759 | 154.99 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 766 | 154.99 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 767 | 154.99 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 773 | 155.01 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 11 | 4 |
| 799 | 155.03 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 9 | 2 |
| 802 | 155.04 | radiation | 1.0 | 14400 | > th | dose independent | sin | 11 | NA |
| 807 | 155.04 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 23 |
| 814 | 155.06 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 14 | NA |
| 818 | 155.07 | temperature | 20.0 | 720 | > th | dose independent | no | NA | NA |
| 819 | 155.07 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 851 | 155.10 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 862 | 155.13 | radiation | 1.0 | 14400 | < th | dose independent | sin | 11 | NA |
| 872 | 155.16 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 877 | 155.17 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 882 | 155.17 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 4 |
| 888 | 155.18 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 908 | 155.20 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 13 |
| 912 | 155.21 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 9 |
| 927 | 155.22 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 997 | 155.29 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 3 | 23 |