Os02g0485000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transferase family protein.
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Os02g0485000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Transferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 208.21 | 0.678 | 8.71 | 2.73 | 0.282 | -1.72 | 0.477 | 3.87 | 0.192 | 13.3 | 19.58 | 1283 | 11.4 | 5.14 |
| 237.88 | 0.718 | 8.69 | 3.1 | 0.29 | -1.68 | 0.0942 | -- | 0.269 | 13.4 | 21.1 | 1264 | 11.8 | 4.82 |
| 208.62 | 0.673 | 8.71 | 2.72 | 0.298 | -1.68 | -- | 4.09 | 0.191 | 13.8 | 19.69 | 1281 | 11.1 | 5.38 |
| 237.36 | 0.718 | 8.69 | 3.09 | 0.314 | -1.61 | -- | -- | 0.303 | 14.4 | 21.08 | 1264 | 11.8 | 4.83 |
| 213.14 | 0.68 | 8.71 | 2.72 | -- | -1.74 | -- | 4.1 | 0.194 | -- | 19.99 | 1260 | 11.1 | 5.51 |
| 302.25 | 0.815 | 8.58 | 3.33 | 0.438 | -- | -0.43 | -- | 0.701 | 14.2 | -- | -- | -- | -- |
| 302.82 | 0.815 | 8.58 | 3.32 | 0.436 | -- | -- | -- | 0.698 | 13.8 | -- | -- | -- | -- |
| 241.15 | 0.723 | 8.68 | 3.13 | -- | -1.69 | -- | -- | 0.312 | -- | 21.36 | 1215 | 11.8 | 5.02 |
| 488.12 | 1.03 | 8.73 | -- | 0.146 | -2 | -- | -- | -0.0186 | 14.1 | 26.82 | 1223 | 11.8 | 4.53 |
| 314.32 | 0.828 | 8.59 | 3.3 | -- | -- | -- | -- | 0.688 | -- | -- | -- | -- | -- |
| 592.66 | 1.14 | 8.67 | -- | 0.376 | -- | -- | -- | 0.329 | 13.6 | -- | -- | -- | -- |
| 486.22 | 1.03 | 8.76 | -- | -- | -1.92 | -- | -- | -0.127 | -- | 31.48 | 1258 | 11.8 | 3.8 |
| 601.3 | 1.14 | 8.67 | -- | -- | -- | -- | -- | 0.322 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 217.18 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 6 |
| 2 | 218.48 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 7 | 219.79 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 12 |
| 11 | 219.81 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 16 |
| 18 | 220.50 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 47 | 223.55 | wind | 7.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 72 | 223.86 | radiation | 10.0 | 1440 | < th | dose dependent | sin | 20 | NA |
| 75 | 223.97 | wind | 7.0 | 4320 | < th | dose independent | rect. | 17 | 2 |
| 102 | 224.34 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 103 | 224.34 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 108 | 224.72 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 14 | 1 |
| 148 | 226.42 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 6 |
| 150 | 226.51 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 4 |
| 160 | 226.87 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 11 | 22 |
| 197 | 227.58 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 198 | 227.58 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 11 | 6 |
| 257 | 228.55 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 12 | 3 |
| 276 | 229.11 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 284 | 229.50 | radiation | 10.0 | 1440 | > th | dose independent | sin | 22 | NA |
| 300 | 229.71 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 8 | 9 |
| 314 | 230.01 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 333 | 230.20 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 347 | 230.50 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 349 | 230.51 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 362 | 230.75 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 5 | 12 |
| 389 | 230.80 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 17 | 2 |
| 409 | 231.20 | radiation | 10.0 | 1440 | > th | dose independent | no | NA | NA |
| 589 | 232.65 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 14 | 23 |
| 684 | 233.75 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 11 | 6 |
| 694 | 233.91 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 18 |
| 695 | 233.92 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 12 |
| 702 | 233.94 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 16 |
| 744 | 234.23 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 1 | 16 |
| 779 | 234.55 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 23 | 17 |
| 781 | 234.59 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 2 | 15 |
| 782 | 234.59 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 21 | 19 |
| 809 | 234.80 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 11 |
| 839 | 235.09 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 5 | 12 |
| 841 | 235.11 | humidity | 80.0 | 1440 | < th | dose independent | sin | 2 | NA |
| 873 | 235.37 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 875 | 235.37 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 877 | 235.37 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 929 | 235.37 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 931 | 235.37 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 933 | 235.37 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 994 | 235.48 | humidity | 90.0 | 720 | > th | dose independent | rect. | 20 | 3 |
| 999 | 235.50 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 11 | 4 |