Os02g0484600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transferase family protein.
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Os02g0484600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Transferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 231.35 | 0.715 | 5.43 | 2.82 | 0.711 | -1.05 | 0.226 | 1.81 | -0.16 | 12.5 | 18.23 | 1302 | -- | -- |
| 237.14 | 0.717 | 5.43 | 3.01 | 0.718 | -1.07 | 0.428 | -- | -0.154 | 12.2 | 19.59 | 1283 | -- | -- |
| 230.82 | 0.708 | 5.42 | 2.88 | 0.716 | -1.08 | -- | 1.8 | -0.148 | 12.4 | 19.55 | 1282 | -- | -- |
| 238.13 | 0.719 | 5.42 | 3.02 | 0.715 | -1.05 | -- | -- | -0.143 | 12.5 | 19.59 | 1281 | -- | -- |
| 251.52 | 0.739 | 5.43 | 2.91 | -- | -1.08 | -- | 1.87 | -0.118 | -- | 17.52 | 1770 | -- | -- |
| 273.69 | 0.776 | 5.36 | 3.12 | 0.497 | -- | 0.35 | -- | 0.147 | 12.9 | -- | -- | -- | -- |
| 274.18 | 0.775 | 5.36 | 3.14 | 0.497 | -- | -- | -- | 0.149 | 13 | -- | -- | -- | -- |
| 256.84 | 0.746 | 5.43 | 3.05 | -- | -1.08 | -- | -- | -0.0871 | -- | 17.58 | 1772 | -- | -- |
| 451.32 | 0.989 | 5.49 | -- | 0.673 | -1.36 | -- | -- | -0.506 | 12 | 30.14 | 1270 | -- | -- |
| 289.56 | 0.795 | 5.37 | 3.12 | -- | -- | -- | -- | 0.139 | -- | -- | -- | -- | -- |
| 533.45 | 1.08 | 5.44 | -- | 0.447 | -- | -- | -- | -0.2 | 12.7 | -- | -- | -- | -- |
| 467.63 | 1.01 | 5.55 | -- | -- | -1.3 | -- | -- | -0.56 | -- | 20.01 | 1488 | -- | -- |
| 545.96 | 1.09 | 5.45 | -- | -- | -- | -- | -- | -0.207 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 229.64 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 2 | 229.64 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 3 | 230.00 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 4 | 230.00 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 5 | 230.84 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 2 | 12 |
| 7 | 231.24 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 9 | 231.29 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 10 | 231.32 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 3 | 11 |
| 28 | 232.03 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 5 | NA |
| 34 | 232.29 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 36 | 232.36 | humidity | 50.0 | 1440 | > th | dose dependent | sin | 4 | NA |
| 40 | 232.41 | wind | 9.0 | 14400 | < th | dose independent | rect. | 5 | 6 |
| 44 | 232.51 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 64 | 232.82 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 19 | 18 |
| 82 | 233.07 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 115 | 233.48 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 119 | 233.52 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 11 | 2 |
| 144 | 233.81 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 9 | 4 |
| 148 | 233.83 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 163 | 233.93 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 195 | 234.24 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 9 | 4 |
| 208 | 234.32 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 241 | 234.62 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 8 | 2 |
| 248 | 234.64 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 9 |
| 249 | 234.65 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 251 | 234.67 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 264 | 234.71 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 299 | 234.98 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 6 | 8 |
| 385 | 235.49 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 4 |
| 390 | 235.55 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 12 | 22 |
| 395 | 235.57 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 8 | 8 |
| 400 | 235.62 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 3 | 3 |
| 406 | 235.65 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 11 |
| 413 | 235.69 | humidity | 70.0 | 1440 | < th | dose independent | sin | 4 | NA |
| 414 | 235.69 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 11 |
| 416 | 235.69 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 11 |
| 423 | 235.73 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 11 |
| 451 | 235.82 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 460 | 235.86 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 469 | 235.91 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 21 | 17 |
| 477 | 235.95 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 8 | 8 |
| 478 | 235.95 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 2 | 12 |
| 479 | 235.95 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 3 | 3 |
| 480 | 235.95 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 8 | 8 |
| 487 | 235.97 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 6 | 8 |
| 502 | 236.01 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 566 | 236.24 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 5 |
| 567 | 236.24 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 5 |
| 605 | 236.37 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 614 | 236.40 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 7 | 10 |
| 629 | 236.48 | wind | 9.0 | 14400 | > th | dose independent | rect. | 5 | 6 |
| 643 | 236.53 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 5 |
| 665 | 236.62 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 666 | 236.62 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 676 | 236.66 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 22 | 19 |
| 682 | 236.68 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 2 | 15 |
| 687 | 236.69 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 6 | 11 |
| 698 | 236.70 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 2 | 23 |
| 708 | 236.72 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 6 | 18 |
| 713 | 236.72 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 6 | 22 |
| 719 | 236.73 | radiation | 20.0 | 1440 | < th | dose independent | no | NA | NA |
| 759 | 236.74 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 15 | 23 |
| 812 | 236.81 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 833 | 236.85 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 8 | 23 |
| 846 | 236.88 | humidity | 80.0 | 1440 | < th | dose dependent | no | NA | NA |
| 855 | 236.90 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 857 | 236.91 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 5 |
| 871 | 236.93 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 879 | 236.95 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 892 | 237.00 | humidity | 70.0 | 1440 | > th | dose independent | sin | 5 | NA |
| 893 | 237.00 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 910 | 237.02 | radiation | 10.0 | 1440 | > th | dose dependent | rect. | 14 | 23 |
| 933 | 237.07 | radiation | 20.0 | 1440 | < th | dose independent | sin | 22 | NA |
| 950 | 237.09 | radiation | 10.0 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 958 | 237.11 | radiation | 10.0 | 1440 | > th | dose dependent | no | NA | NA |
| 959 | 237.11 | radiation | 10.0 | 1440 | > th | dose dependent | rect. | 6 | 12 |