Os02g0483500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transferase family protein.
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Os02g0483500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Transferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 390.3 | 0.928 | 7.62 | 0.00331 | 2.34 | -1.68 | -1.5 | 1.67 | 0.0929 | 9.71 | 25.3 | 343 | -- | -- |
| 397.58 | 0.929 | 7.67 | -0.319 | 2.41 | -1.54 | -1.81 | -- | -0.0288 | 9.51 | 25.3 | 346 | -- | -- |
| 398.65 | 0.93 | 7.62 | 0.0268 | 2.33 | -1.71 | -- | 1.94 | 0.123 | 9.73 | 25.34 | 346 | -- | -- |
| 407.51 | 0.94 | 7.68 | -0.47 | 2.41 | -1.53 | -- | -- | -0.08 | 9.58 | 25.4 | 350 | -- | -- |
| 602.86 | 1.14 | 7.66 | 0.286 | -- | -2.84 | -- | 2.46 | 0.366 | -- | 25.7 | 556 | -- | -- |
| 501.2 | 1.05 | 7.8 | -0.919 | 3.09 | -- | -1.88 | -- | -0.758 | 8.45 | -- | -- | -- | -- |
| 512.46 | 1.06 | 7.8 | -0.977 | 3.09 | -- | -- | -- | -0.758 | 8.44 | -- | -- | -- | -- |
| 622.54 | 1.16 | 7.64 | -0.128 | -- | -2.84 | -- | -- | 0.324 | -- | 25.6 | 566 | -- | -- |
| 414.19 | 0.948 | 7.65 | -- | 2.35 | -1.69 | -- | -- | 0.0297 | 9.79 | 25.35 | 346 | -- | -- |
| 1045.68 | 1.51 | 7.89 | -0.962 | -- | -- | -- | -- | -0.727 | -- | -- | -- | -- | -- |
| 537.64 | 1.08 | 7.78 | -- | 3.09 | -- | -- | -- | -0.649 | 8.47 | -- | -- | -- | -- |
| 622.58 | 1.16 | 7.67 | -- | -- | -2.9 | -- | -- | 0.218 | -- | 25.74 | 585 | -- | -- |
| 1070.09 | 1.53 | 7.86 | -- | -- | -- | -- | -- | -0.62 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 383.93 | wind | 9.0 | 43200 | > th | dose independent | rect. | 10 | 14 |
| 2 | 383.94 | wind | 9.0 | 43200 | > th | dose independent | sin | 19 | NA |
| 7 | 384.70 | wind | 9.0 | 43200 | < th | dose independent | rect. | 10 | 14 |
| 8 | 384.96 | wind | 9.0 | 43200 | < th | dose independent | sin | 19 | NA |
| 9 | 384.97 | wind | 9.0 | 43200 | < th | dose independent | rect. | 10 | 16 |
| 12 | 385.07 | wind | 9.0 | 43200 | > th | dose independent | rect. | 11 | 20 |
| 15 | 385.45 | wind | 9.0 | 43200 | < th | dose independent | rect. | 9 | 9 |
| 16 | 385.47 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 13 | 14 |
| 22 | 385.82 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 13 | 11 |
| 36 | 386.55 | wind | 9.0 | 43200 | < th | dose independent | rect. | 11 | 20 |
| 40 | 386.61 | wind | 9.0 | 43200 | > th | dose independent | rect. | 13 | 14 |
| 61 | 387.56 | wind | 9.0 | 43200 | > th | dose independent | rect. | 14 | 10 |
| 63 | 387.65 | wind | 9.0 | 43200 | > th | dose independent | rect. | 14 | 12 |
| 72 | 387.84 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 10 |
| 73 | 387.84 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 12 |
| 74 | 387.85 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 10 | 8 |
| 75 | 387.85 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 8 |
| 89 | 387.86 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 17 |
| 123 | 388.16 | wind | 9.0 | 43200 | < th | dose independent | rect. | 13 | 14 |
| 135 | 388.36 | radiation | 1.0 | 43200 | < th | dose dependent | sin | 8 | NA |
| 136 | 388.36 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 174 | 388.74 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 4 | 4 |
| 177 | 388.80 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 6 | 5 |
| 178 | 388.80 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 6 | 5 |
| 198 | 388.98 | wind | 9.0 | 43200 | < th | dose independent | rect. | 14 | 10 |
| 199 | 388.99 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 207 | 389.07 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 208 | 389.09 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 3 | 9 |
| 260 | 389.76 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 17 |
| 277 | 390.03 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 18 | 17 |
| 282 | 390.17 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 342 | 390.79 | wind | 7.0 | 43200 | > th | dose dependent | sin | 18 | NA |
| 374 | 391.10 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 2 | 9 |
| 375 | 391.10 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 24 | 11 |
| 403 | 391.22 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 17 | 8 |
| 410 | 391.23 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 17 | 10 |
| 424 | 391.24 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 17 | 3 |
| 441 | 391.41 | humidity | 90.0 | 43200 | > th | dose dependent | sin | 4 | NA |
| 452 | 391.49 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 456 | 391.49 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 466 | 391.55 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 487 | 391.75 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 548 | 391.90 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 22 | 15 |
| 571 | 392.02 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 16 |
| 572 | 392.02 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 17 |
| 575 | 392.02 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 19 |
| 578 | 392.02 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 21 |
| 589 | 392.03 | radiation | 1.0 | 43200 | < th | dose dependent | no | NA | NA |
| 627 | 392.14 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 19 | 18 |
| 641 | 392.28 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 10 | 23 |
| 667 | 392.46 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 7 | 23 |
| 670 | 392.48 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 20 | 10 |
| 671 | 392.49 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 680 | 392.54 | radiation | 1.0 | 43200 | < th | dose independent | sin | 7 | NA |
| 700 | 392.59 | radiation | 1.0 | 43200 | > th | dose independent | sin | 7 | NA |
| 705 | 392.60 | temperature | 25.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 733 | 392.66 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 1 | 5 |
| 736 | 392.67 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 819 | 392.85 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 860 | 392.99 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 866 | 393.01 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 6 | 2 |
| 915 | 393.21 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 14 | 5 |
| 966 | 393.39 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 3 | 9 |
| 975 | 393.44 | radiation | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |