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Os02g0471500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein phosphatase 2C-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.4 (0.0219) R2 : 0.833
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.59 (0.0552) R2dC : 0.804 R2C : 0.804
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.361 (0.0461) R2dN8 : 0.029 R2N8 : 0.0293
σ : 0.413
deviance : 78.03
__
_____
C
peak time of C : 3.44
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
67.77 0.387 12.4 0.0809 2.58 0.458 1.09 0.324 0.422 3.45 999 4331 -- --
67.84 0.384 12.4 0.0692 2.58 0.506 1.08 -- 0.423 3.45 998.9 4330 -- --
71.44 0.394 12.4 0.0627 2.58 0.467 -- 0.288 0.418 3.44 998.9 4338 -- --
71.51 0.394 12.4 0.0503 2.59 0.508 -- -- 0.42 3.44 999 4363 -- --
446.95 0.985 12.4 0.192 -- 0.329 -- 0.72 0.479 -- 999 5046 -- --
73.85 0.403 12.4 0.147 2.58 -- 1.1 -- 0.382 3.45 -- -- -- --
77.6 0.413 12.4 0.127 2.58 -- -- -- 0.376 3.44 -- -- -- --
435.83 0.972 12.4 -0.0816 -- 0.599 -- -- 0.568 -- 1009 2517 -- --
71.57 0.394 12.4 -- 2.59 0.513 -- -- 0.414 3.43 999 4348 -- --
452.54 0.994 12.4 0.237 -- -- -- -- 0.444 -- -- -- -- --
78.03 0.413 12.4 -- 2.59 -- -- -- 0.361 3.44 -- -- -- --
433.2 0.969 12.3 -- -- 0.756 -- -- 0.66 -- 1009 2468 -- --
454.02 0.995 12.4 -- -- -- -- -- 0.418 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 59.08 humidity 60.0 720 > th dose dependent rect. 5 2
5 59.77 humidity 50.0 720 > th dose dependent rect. 20 4
6 59.84 temperature 20.0 720 > th dose independent rect. 6 1
9 59.94 temperature 10.0 720 > th dose dependent rect. 5 2
10 60.11 humidity 80.0 720 > th dose independent rect. 5 2
11 60.20 wind 9.0 720 < th dose independent rect. 19 22
15 60.39 radiation 20.0 720 < th dose independent rect. 5 2
18 60.49 wind 1.0 720 > th dose independent rect. 17 2
23 60.80 radiation 40.0 720 < th dose independent rect. 19 14
24 60.82 radiation 20.0 720 < th dose independent rect. 21 10
25 60.94 radiation 10.0 720 < th dose independent rect. 17 2
27 60.96 radiation 40.0 720 < th dose dependent rect. 17 2
32 61.24 humidity 70.0 10 > th dose independent rect. 18 12
37 61.36 radiation 40.0 720 < th dose dependent rect. 5 2
41 61.41 radiation 10.0 90 < th dose dependent rect. 17 13
43 61.43 temperature 10.0 720 > th dose independent rect. 17 2
44 61.43 atmosphere 1015.0 720 < th dose independent rect. 17 2
47 61.43 temperature 10.0 720 > th dose independent rect. 19 22
49 61.48 wind 9.0 720 < th dose independent rect. 12 5
50 61.49 wind 7.0 720 < th dose independent rect. 5 2
52 61.49 temperature 10.0 720 > th dose independent rect. 5 2
53 61.49 temperature 30.0 720 < th dose independent rect. 5 2
54 61.49 humidity 50.0 720 > th dose independent rect. 5 2
56 61.49 atmosphere 995.0 720 > th dose independent rect. 5 2
57 61.49 atmosphere 1015.0 720 < th dose independent rect. 5 2
59 61.49 temperature 10.0 720 > th dose independent rect. 7 22
60 61.51 temperature 30.0 10 < th dose independent rect. 18 12
63 61.66 precipitation 0.1 720 < th dose independent rect. 24 5
64 61.66 wind 9.0 720 < th dose independent rect. 5 10
65 61.66 precipitation 0.1 720 < th dose dependent rect. 24 5
69 61.72 wind 9.0 720 < th dose independent rect. 17 2
71 61.75 humidity 50.0 10 > th dose dependent rect. 6 11
73 61.76 wind 9.0 720 < th dose independent rect. 5 19
74 61.77 temperature 30.0 90 < th dose independent rect. 17 12
75 61.79 humidity 70.0 720 > th dose independent rect. 21 10
76 61.81 humidity 50.0 720 > th dose independent rect. 17 2
77 61.82 radiation 1.0 90 < th dose independent rect. 17 13
81 61.87 temperature 10.0 720 > th dose independent rect. 9 10
82 61.87 atmosphere 1015.0 720 < th dose independent rect. 9 10
83 61.87 temperature 10.0 720 > th dose independent rect. 19 14
84 61.87 humidity 50.0 720 > th dose independent rect. 19 14
85 61.87 atmosphere 995.0 720 > th dose independent rect. 19 14
90 61.91 precipitation 0.1 720 < th dose independent rect. 18 1
91 61.91 precipitation 0.1 720 < th dose dependent rect. 18 1
92 61.92 precipitation 0.1 720 < th dose independent rect. 5 2
93 61.92 temperature 10.0 720 > th dose independent rect. 21 10
94 61.92 temperature 30.0 720 < th dose independent rect. 21 10
95 61.92 humidity 50.0 720 > th dose independent rect. 21 10
97 61.92 atmosphere 995.0 720 > th dose independent rect. 21 10
99 61.92 temperature 10.0 720 > th dose independent rect. 7 14
100 61.92 precipitation 0.1 720 < th dose dependent rect. 5 2
103 61.95 wind 9.0 720 < th dose independent rect. 19 14
105 61.99 wind 9.0 720 < th dose independent rect. 21 10
110 62.09 wind 9.0 720 < th dose independent rect. 5 12
114 62.16 wind 9.0 720 < th dose independent rect. 3 14
115 62.17 temperature 10.0 90 > th dose dependent rect. 5 22
116 62.18 wind 9.0 720 < th dose dependent rect. 6 1
117 62.22 radiation 40.0 720 < th dose dependent rect. 21 10
119 62.31 humidity 50.0 720 > th dose dependent rect. 20 12
120 62.31 temperature 10.0 30 > th dose dependent rect. 6 20
130 62.46 wind 7.0 270 < th dose independent rect. 12 12
132 62.47 temperature 10.0 1440 > th dose independent rect. 7 12
135 62.47 temperature 10.0 1440 > th dose independent rect. 19 12
138 62.47 temperature 30.0 1440 < th dose independent rect. 19 12
142 62.47 humidity 50.0 1440 > th dose independent rect. 19 12
144 62.47 atmosphere 995.0 1440 > th dose independent rect. 19 12
145 62.47 radiation 40.0 1440 < th dose independent rect. 19 12
153 62.55 wind 7.0 720 < th dose independent rect. 24 5
157 62.57 precipitation 0.1 720 < th dose independent rect. 17 19
158 62.57 precipitation 0.1 720 < th dose dependent rect. 17 19
163 62.62 radiation 10.0 720 < th dose independent rect. 24 5
167 62.64 temperature 10.0 720 > th dose independent rect. 12 5
168 62.64 atmosphere 1015.0 720 < th dose independent rect. 12 5
169 62.64 temperature 10.0 720 > th dose independent rect. 17 19
171 62.64 radiation 10.0 720 < th dose dependent rect. 24 5
203 62.71 temperature 10.0 720 > th dose independent rect. 24 5
204 62.71 temperature 30.0 720 < th dose independent rect. 24 5
205 62.71 humidity 50.0 720 > th dose independent rect. 24 5
208 62.71 atmosphere 995.0 720 > th dose independent rect. 24 5
213 62.71 atmosphere 1015.0 720 < th dose independent rect. 7 14
214 62.71 temperature 10.0 720 > th dose independent rect. 5 19
223 62.83 wind 9.0 30 < th dose independent rect. 6 12
230 62.90 precipitation 0.1 270 < th dose independent rect. 24 12
233 62.90 precipitation 0.1 270 < th dose dependent rect. 24 12
234 62.91 radiation 1.0 720 > th dose independent rect. 7 6
239 62.97 precipitation 0.1 720 < th dose independent rect. 7 22
241 62.97 precipitation 0.1 720 < th dose dependent rect. 7 22
249 63.01 radiation 10.0 720 < th dose independent rect. 17 12
251 63.04 radiation 10.0 14400 < th dose dependent rect. 24 3
269 63.07 atmosphere 995.0 720 > th dose independent rect. 17 2
270 63.07 radiation 40.0 720 < th dose independent rect. 15 14
272 63.08 humidity 70.0 720 > th dose independent rect. 19 5
286 63.19 precipitation 0.1 30 < th dose independent rect. 18 12
288 63.19 precipitation 0.1 30 < th dose dependent rect. 18 12
295 63.22 humidity 80.0 30 > th dose dependent rect. 6 20
302 63.26 radiation 20.0 270 < th dose independent rect. 20 12
306 63.29 atmosphere 995.0 30 > th dose independent rect. 18 12
308 63.30 temperature 10.0 720 > th dose independent rect. 5 10
309 63.30 atmosphere 1015.0 720 < th dose independent rect. 5 10
310 63.30 temperature 10.0 30 > th dose independent rect. 6 12
312 63.30 temperature 10.0 30 > th dose independent rect. 18 12
314 63.30 atmosphere 1015.0 30 < th dose independent rect. 6 12
315 63.30 radiation 20.0 30 < th dose independent rect. 18 12
318 63.30 temperature 10.0 720 > th dose independent rect. 15 14
322 63.33 temperature 10.0 30 > th dose dependent rect. 6 12
328 63.36 atmosphere 995.0 720 > th dose independent rect. 17 19
333 63.38 precipitation 0.1 30 < th dose independent rect. 6 12
334 63.38 precipitation 0.1 30 < th dose dependent rect. 6 12
336 63.39 temperature 10.0 720 > th dose independent rect. 17 10
339 63.39 wind 9.0 30 < th dose independent rect. 18 12
340 63.39 temperature 10.0 720 > th dose independent rect. 3 14
341 63.39 radiation 40.0 720 < th dose dependent rect. 17 10
344 63.40 precipitation 0.1 720 < th dose independent rect. 24 14
345 63.40 precipitation 0.1 720 < th dose dependent rect. 24 14
346 63.42 humidity 60.0 14400 > th dose independent rect. 3 4
354 63.45 temperature 10.0 720 > th dose independent rect. 5 12
357 63.45 temperature 10.0 720 > th dose independent rect. 17 12
360 63.45 atmosphere 1015.0 720 < th dose independent rect. 5 12
372 63.47 wind 9.0 720 < th dose dependent rect. 5 4
390 63.54 humidity 80.0 10 > th dose independent rect. 6 10
391 63.55 wind 9.0 720 < th dose independent rect. 17 19
393 63.56 atmosphere 1015.0 720 < th dose independent rect. 24 5
405 63.60 precipitation 0.1 720 < th dose independent rect. 2 10
407 63.60 precipitation 0.1 720 < th dose dependent rect. 2 10
417 63.64 humidity 50.0 10 > th dose independent rect. 6 12
421 63.65 radiation 40.0 270 < th dose dependent rect. 20 12
431 63.70 precipitation 0.1 720 < th dose independent rect. 12 5
432 63.70 wind 9.0 720 < th dose independent rect. 17 12
434 63.70 precipitation 0.1 720 < th dose dependent rect. 12 5
439 63.73 precipitation 0.1 720 < th dose independent rect. 17 12
441 63.73 precipitation 0.1 720 < th dose dependent rect. 17 12
443 63.74 precipitation 0.1 720 < th dose independent rect. 7 6
444 63.74 precipitation 0.1 720 < th dose dependent rect. 7 6
457 63.77 wind 1.0 720 > th dose dependent rect. 18 1
463 63.80 wind 9.0 720 < th dose independent rect. 17 10
466 63.80 temperature 10.0 270 > th dose independent rect. 12 12
467 63.80 temperature 10.0 270 > th dose independent rect. 24 12
469 63.80 atmosphere 995.0 270 > th dose independent rect. 24 12
470 63.80 atmosphere 1015.0 270 < th dose independent rect. 24 12
477 63.81 wind 1.0 720 > th dose independent rect. 9 10
514 63.91 precipitation 0.1 720 < th dose independent rect. 1 18
516 63.91 precipitation 0.1 720 < th dose dependent rect. 1 18
520 63.93 temperature 10.0 720 > th dose independent rect. 7 6
521 63.93 atmosphere 995.0 720 > th dose independent rect. 7 6
522 63.93 atmosphere 1015.0 720 < th dose independent rect. 7 6
525 63.93 temperature 10.0 720 > th dose independent rect. 13 18
533 63.97 temperature 10.0 720 > th dose independent rect. 19 6
534 63.97 temperature 30.0 720 < th dose independent rect. 19 6
535 63.97 humidity 50.0 720 > th dose independent rect. 19 6
536 63.97 atmosphere 995.0 720 > th dose independent rect. 19 6
537 63.97 radiation 1.0 720 < th dose independent rect. 19 6
542 63.97 temperature 10.0 720 > th dose independent rect. 1 18
543 63.97 radiation 1.0 720 < th dose dependent rect. 19 6
555 64.02 wind 9.0 270 < th dose independent rect. 24 12
559 64.05 wind 9.0 720 < th dose independent rect. 19 6
565 64.06 wind 1.0 30 > th dose independent rect. 6 12
590 64.11 wind 9.0 720 < th dose independent rect. 13 18
591 64.11 wind 9.0 720 < th dose independent rect. 12 20
595 64.12 precipitation 0.1 720 < th dose independent rect. 24 20
597 64.12 precipitation 0.1 720 < th dose dependent rect. 24 20
615 64.18 atmosphere 995.0 30 > th dose independent rect. 6 12
637 64.26 wind 7.0 90 < th dose independent rect. 5 22
649 64.28 precipitation 0.1 720 < th dose independent rect. 9 10
652 64.28 precipitation 0.1 720 < th dose dependent rect. 9 10
661 64.31 humidity 50.0 720 > th dose independent rect. 17 19
673 64.33 wind 9.0 270 < th dose independent rect. 20 12
695 64.36 atmosphere 995.0 720 > th dose independent rect. 17 12
703 64.38 temperature 10.0 270 > th dose independent rect. 8 12
704 64.38 temperature 10.0 270 > th dose independent rect. 20 12
705 64.38 temperature 30.0 270 < th dose independent rect. 20 12
706 64.38 humidity 50.0 270 > th dose independent rect. 20 12
708 64.38 atmosphere 995.0 270 > th dose independent rect. 20 12
709 64.38 atmosphere 1015.0 270 < th dose independent rect. 8 12
712 64.39 wind 5.0 720 < th dose independent rect. 5 10
719 64.42 radiation 30.0 30 < th dose dependent rect. 6 11
725 64.44 precipitation 0.1 720 < th dose independent rect. 5 10
726 64.44 precipitation 0.1 720 < th dose dependent rect. 5 10
730 64.45 wind 9.0 270 < th dose dependent rect. 12 12
734 64.47 humidity 80.0 10 > th dose independent rect. 6 4
738 64.48 atmosphere 1015.0 30 < th dose independent rect. 18 12
747 64.50 radiation 20.0 90 < th dose dependent rect. 6 9
774 64.56 humidity 80.0 720 < th dose independent rect. 18 1
778 64.56 atmosphere 995.0 30 > th dose dependent rect. 18 12
789 64.58 precipitation 0.1 270 < th dose independent rect. 8 12
794 64.58 precipitation 0.1 270 < th dose dependent rect. 8 12
798 64.59 temperature 30.0 720 < th dose independent rect. 19 14
803 64.61 precipitation 0.1 270 < th dose independent rect. 12 12
804 64.61 precipitation 0.1 270 < th dose dependent rect. 12 12
815 64.63 wind 7.0 90 < th dose dependent rect. 3 2
830 64.66 wind 9.0 720 < th dose dependent rect. 24 5
832 64.66 radiation 1.0 90 < th dose dependent rect. 2 21
836 64.68 precipitation 0.1 90 < th dose independent rect. 3 2
840 64.68 temperature 10.0 720 > th dose dependent rect. 18 1
841 64.68 precipitation 0.1 90 < th dose dependent rect. 3 2
850 64.71 precipitation 0.1 720 < th dose independent rect. 8 4
851 64.71 precipitation 0.1 720 < th dose dependent rect. 8 4
856 64.73 wind 5.0 90 < th dose independent rect. 3 2
858 64.73 humidity 50.0 720 > th dose independent rect. 7 6
871 64.76 wind 9.0 720 < th dose independent rect. 14 10
872 64.77 temperature 10.0 720 > th dose independent rect. 8 4
873 64.77 atmosphere 995.0 720 > th dose independent rect. 8 4
874 64.77 atmosphere 1015.0 720 < th dose independent rect. 8 4
876 64.77 temperature 10.0 720 > th dose independent rect. 12 20
893 64.82 temperature 10.0 720 > th dose independent rect. 20 4
894 64.82 temperature 30.0 720 < th dose independent rect. 20 4
895 64.82 humidity 50.0 720 > th dose independent rect. 20 4
898 64.82 atmosphere 995.0 720 > th dose independent rect. 20 4
899 64.82 radiation 1.0 720 < th dose independent rect. 20 4
908 64.82 temperature 10.0 720 > th dose independent rect. 24 20
911 64.82 radiation 1.0 720 < th dose dependent rect. 20 4
917 64.84 wind 9.0 720 < th dose independent rect. 20 4
923 64.84 precipitation 0.1 720 < th dose independent rect. 7 14
924 64.84 wind 7.0 30 < th dose independent rect. 6 20
928 64.84 precipitation 0.1 720 < th dose dependent rect. 7 14
933 64.85 radiation 40.0 90 < th dose independent rect. 12 14
940 64.86 humidity 50.0 270 > th dose independent rect. 24 12
976 64.92 radiation 1.0 90 < th dose independent rect. 2 21
990 64.95 humidity 50.0 10 > th dose dependent rect. 18 12