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Os02g0469000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.81 (0.0218) R2 : 0.42
β1 : 1.13 (0.08) R2dD : 0.264 R2D : 0.204
β2 : 0.634 (0.055) R2dC : 0.169 R2C : 0.143
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.26 (0.0466) R2dN8 : 0.053 R2N8 : -0.003
σ : 0.411
deviance : 76.95
__
_____
C
peak time of C : 15.6
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
65.12 0.379 7.85 1.13 0.572 -0.404 -0.311 -0.815 0.167 15.8 30.14 1197 -- --
65.17 0.376 7.83 1.26 0.576 -0.49 -0.291 -- 0.181 15.8 30.23 1196 -- --
65.39 0.377 7.85 1.13 0.572 -0.403 -- -0.786 0.168 15.8 30.1 1197 -- --
65.41 0.377 7.84 1.26 0.571 -0.492 -- -- 0.166 15.9 30.1 1197 -- --
83.06 0.424 7.85 1.08 -- -0.443 -- -1.1 0.163 -- 29.65 1201 -- --
76.84 0.411 7.81 1.13 0.634 -- -0.191 -- 0.261 15.5 -- -- -- --
76.95 0.411 7.81 1.13 0.634 -- -- -- 0.26 15.6 -- -- -- --
83.12 0.425 7.83 1.26 -- -0.578 -- -- 0.15 -- 29.36 1224 -- --
106.07 0.48 7.85 -- 0.592 -0.314 -- -- 0.0923 15.6 30.15 6114 -- --
99.35 0.466 7.81 1.1 -- -- -- -- 0.243 -- -- -- -- --
110.67 0.492 7.84 -- 0.611 -- -- -- 0.134 15.6 -- -- -- --
123.15 0.517 7.86 -- -- -0.406 -- -- 0.0341 -- 30.6 1173 -- --
131.53 0.535 7.84 -- -- -- -- -- 0.121 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 55.36 temperature 10.0 270 > th dose dependent rect. 2 17
7 56.36 wind 9.0 30 < th dose dependent rect. 3 6
12 56.52 precipitation 0.1 10 < th dose independent rect. 3 6
13 56.52 precipitation 0.1 10 < th dose dependent rect. 3 6
18 56.59 precipitation 0.1 270 < th dose independent rect. 1 6
20 56.59 precipitation 0.1 270 < th dose dependent rect. 1 6
23 56.79 wind 7.0 270 < th dose independent rect. 1 6
25 56.83 radiation 20.0 270 < th dose independent rect. 1 6
28 56.86 wind 7.0 10 < th dose independent rect. 3 6
30 56.93 radiation 30.0 90 < th dose independent rect. 3 6
31 56.94 humidity 70.0 270 > th dose independent rect. 1 6
35 56.95 radiation 40.0 90 < th dose dependent rect. 3 6
36 56.96 temperature 10.0 270 > th dose independent rect. 1 6
38 56.96 temperature 30.0 270 < th dose independent rect. 1 6
39 56.96 humidity 50.0 270 > th dose independent rect. 1 6
41 56.96 atmosphere 995.0 270 > th dose independent rect. 1 6
42 56.96 atmosphere 1015.0 270 < th dose independent rect. 1 6
45 56.96 temperature 10.0 270 > th dose independent rect. 7 18
46 56.97 wind 9.0 270 < th dose independent rect. 7 18
50 57.10 temperature 10.0 30 > th dose independent rect. 3 6
52 57.10 temperature 30.0 30 < th dose independent rect. 3 6
53 57.10 humidity 50.0 30 > th dose independent rect. 3 6
55 57.10 atmosphere 995.0 30 > th dose independent rect. 3 6
56 57.10 atmosphere 1015.0 30 < th dose independent rect. 3 6
57 57.10 temperature 10.0 30 > th dose independent rect. 9 18
58 57.11 radiation 40.0 270 < th dose dependent rect. 1 6
69 57.16 wind 9.0 270 < th dose dependent rect. 1 6
81 57.18 humidity 50.0 90 > th dose dependent rect. 3 6
90 57.29 precipitation 0.1 10 < th dose independent rect. 9 18
91 57.29 precipitation 0.1 10 < th dose dependent rect. 9 18
98 57.39 precipitation 0.1 270 < th dose independent rect. 3 2
99 57.39 precipitation 0.1 270 < th dose dependent rect. 3 2
101 57.41 humidity 50.0 90 > th dose dependent rect. 19 8
103 57.43 precipitation 0.1 270 < th dose independent rect. 7 18
104 57.43 precipitation 0.1 270 < th dose dependent rect. 7 18
107 57.45 wind 9.0 30 < th dose independent rect. 9 18
116 57.52 temperature 15.0 90 > th dose independent rect. 3 16
124 57.54 humidity 50.0 270 > th dose dependent rect. 1 6
131 57.76 atmosphere 995.0 30 > th dose independent rect. 9 18
139 57.85 wind 7.0 270 < th dose independent rect. 3 2
140 57.88 temperature 10.0 1440 > th dose independent rect. 4 6
143 57.88 atmosphere 995.0 1440 > th dose independent rect. 4 6
144 57.88 atmosphere 1015.0 1440 < th dose independent rect. 4 6
146 57.88 temperature 10.0 1440 > th dose independent rect. 10 18
150 57.90 wind 9.0 270 < th dose dependent rect. 3 2
152 57.91 temperature 10.0 270 > th dose independent rect. 3 2
154 57.91 temperature 30.0 270 < th dose independent rect. 3 2
155 57.91 humidity 50.0 270 > th dose independent rect. 3 2
158 57.91 atmosphere 995.0 270 > th dose independent rect. 3 2
159 57.91 atmosphere 1010.0 270 < th dose independent rect. 3 2
161 57.91 radiation 20.0 270 < th dose independent rect. 3 2
164 57.91 temperature 10.0 270 > th dose independent rect. 5 22
167 57.92 radiation 40.0 270 < th dose dependent rect. 3 2
174 57.95 atmosphere 995.0 270 > th dose independent rect. 7 18
178 57.96 atmosphere 995.0 90 > th dose dependent rect. 19 8
179 57.97 radiation 1.0 270 < th dose independent rect. 3 2
189 58.06 humidity 50.0 270 > th dose dependent rect. 3 2
191 58.11 wind 9.0 270 < th dose independent rect. 5 22
218 58.28 radiation 40.0 30 < th dose independent rect. 3 8
237 58.37 wind 7.0 90 < th dose independent rect. 19 8
238 58.38 precipitation 0.1 90 < th dose independent rect. 3 16
239 58.38 precipitation 0.1 90 < th dose dependent rect. 3 16
244 58.44 wind 7.0 30 < th dose dependent rect. 3 8
246 58.48 temperature 10.0 90 > th dose independent rect. 19 8
247 58.48 temperature 30.0 90 < th dose independent rect. 19 8
248 58.48 humidity 50.0 90 > th dose independent rect. 19 8
250 58.48 atmosphere 995.0 90 > th dose independent rect. 19 8
251 58.48 radiation 1.0 90 < th dose independent rect. 19 8
257 58.48 atmosphere 1015.0 90 < th dose independent rect. 3 16
258 58.48 wind 9.0 90 < th dose dependent rect. 19 8
259 58.48 radiation 1.0 90 < th dose dependent rect. 19 8
264 58.50 wind 9.0 90 < th dose independent rect. 3 16
273 58.56 temperature 10.0 270 > th dose dependent rect. 1 6
275 58.57 temperature 10.0 90 > th dose dependent rect. 3 5
288 58.67 temperature 10.0 10 > th dose dependent rect. 3 6
290 58.69 precipitation 0.1 90 < th dose independent rect. 19 8
292 58.69 precipitation 0.1 90 < th dose dependent rect. 19 8
336 58.89 temperature 10.0 270 > th dose dependent rect. 12 8
340 58.91 radiation 10.0 270 < th dose dependent rect. 17 9
343 58.94 radiation 10.0 270 < th dose independent rect. 17 9
352 59.00 humidity 50.0 270 > th dose independent rect. 7 18
356 59.03 precipitation 0.1 10 < th dose independent rect. 3 17
357 59.03 precipitation 0.1 10 < th dose dependent rect. 3 17
360 59.04 atmosphere 1015.0 270 < th dose dependent rect. 3 2
368 59.10 wind 1.0 270 > th dose independent rect. 7 18
369 59.12 precipitation 0.1 270 < th dose independent rect. 14 16
374 59.12 precipitation 0.1 270 < th dose dependent rect. 14 16
395 59.19 precipitation 0.1 270 < th dose independent rect. 5 22
399 59.19 precipitation 0.1 270 < th dose dependent rect. 5 22
428 59.28 temperature 10.0 270 > th dose dependent rect. 3 2
454 59.37 temperature 10.0 270 > th dose independent rect. 6 8
455 59.37 atmosphere 995.0 270 > th dose independent rect. 6 8
456 59.37 atmosphere 1015.0 270 < th dose independent rect. 6 8
457 59.37 temperature 10.0 270 > th dose independent rect. 14 16
476 59.43 atmosphere 1010.0 270 < th dose independent rect. 12 8
480 59.46 temperature 20.0 270 > th dose independent rect. 12 8
490 59.47 precipitation 0.1 270 < th dose independent rect. 6 8
493 59.47 precipitation 0.1 270 < th dose dependent rect. 6 8
514 59.54 humidity 50.0 30 > th dose dependent rect. 3 8
541 59.59 temperature 10.0 270 > th dose independent rect. 20 16
542 59.59 atmosphere 995.0 270 > th dose independent rect. 20 16
544 59.61 wind 9.0 270 < th dose independent rect. 6 8
593 59.69 atmosphere 995.0 90 > th dose independent rect. 3 16
599 59.71 precipitation 0.1 270 < th dose independent rect. 12 8
602 59.71 precipitation 0.1 270 < th dose dependent rect. 12 8
624 59.74 atmosphere 1015.0 90 < th dose dependent rect. 3 5
675 59.80 wind 1.0 270 > th dose independent rect. 12 8
703 59.87 wind 9.0 270 < th dose independent rect. 20 16
729 59.91 wind 9.0 270 < th dose independent rect. 14 16
750 59.98 wind 9.0 1440 < th dose independent rect. 4 5
754 59.98 humidity 50.0 1440 > th dose independent rect. 4 5
758 59.98 temperature 10.0 1440 > th dose independent rect. 21 7
761 59.98 temperature 30.0 1440 < th dose independent rect. 21 7
765 59.98 humidity 50.0 1440 > th dose independent rect. 21 7
771 59.98 atmosphere 995.0 1440 > th dose independent rect. 21 7
772 59.98 radiation 1.0 1440 < th dose independent rect. 21 7
792 59.98 temperature 10.0 1440 > th dose independent rect. 4 17
805 59.99 radiation 20.0 1440 < th dose dependent rect. 21 7
815 60.02 humidity 60.0 30 > th dose independent rect. 3 8
842 60.09 humidity 50.0 270 > th dose independent rect. 20 16
850 60.10 atmosphere 1015.0 30 < th dose independent rect. 9 18
865 60.16 wind 9.0 270 < th dose independent rect. 12 8
872 60.19 precipitation 0.1 270 < th dose independent rect. 20 16
873 60.19 precipitation 0.1 270 < th dose dependent rect. 20 16
908 60.29 wind 5.0 30 < th dose independent rect. 3 8
914 60.30 temperature 30.0 90 < th dose independent rect. 8 19
926 60.32 wind 1.0 270 > th dose independent rect. 3 1
961 60.38 radiation 40.0 10 < th dose dependent rect. 3 8
973 60.39 radiation 1.0 270 < th dose dependent rect. 5 21
977 60.41 temperature 30.0 270 < th dose dependent rect. 7 7
980 60.42 temperature 20.0 30 > th dose independent rect. 12 8
982 60.42 atmosphere 1015.0 270 < th dose dependent rect. 1 5
985 60.43 humidity 50.0 10 > th dose independent rect. 3 17
991 60.44 temperature 30.0 10 < th dose independent rect. 9 18