Os02g0468800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein prenyltransferase domain containing protein.
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Os02g0468800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein prenyltransferase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 129.87 | 0.535 | 5.35 | 2.62 | 0.812 | -1.34 | -0.831 | 1.55 | 0.618 | 17.6 | 8.736 | 1567 | -- | -- |
| 133.46 | 0.538 | 5.39 | 2.45 | 0.792 | -1.26 | -0.806 | -- | 0.53 | 17.7 | 6.285 | 4513 | -- | -- |
| 131.23 | 0.534 | 5.34 | 2.65 | 0.754 | -1.34 | -- | 1.76 | 0.643 | 18.1 | 14.38 | 1322 | -- | -- |
| 135.07 | 0.541 | 5.39 | 2.45 | 0.792 | -1.26 | -- | -- | 0.526 | 17.8 | 1.394 | 4510 | -- | -- |
| 160.33 | 0.59 | 5.33 | 2.65 | -- | -1.45 | -- | 1.69 | 0.618 | -- | 14.11 | 1312 | -- | -- |
| 161.31 | 0.595 | 5.44 | 1.86 | 0.818 | -- | -0.876 | -- | 0.284 | 17.6 | -- | -- | -- | -- |
| 163.16 | 0.598 | 5.45 | 1.86 | 0.814 | -- | -- | -- | 0.28 | 17.7 | -- | -- | -- | -- |
| 162.73 | 0.594 | 5.38 | 2.28 | -- | -1.43 | -- | -- | 0.521 | -- | 13.39 | 1320 | -- | -- |
| 251.71 | 0.739 | 5.48 | -- | 0.774 | -0.389 | -- | -- | 0.127 | 18.1 | 12.25 | 1120 | -- | -- |
| 197.53 | 0.657 | 5.43 | 1.84 | -- | -- | -- | -- | 0.261 | -- | -- | -- | -- | -- |
| 254.43 | 0.746 | 5.49 | -- | 0.784 | -- | -- | -- | 0.0728 | 17.8 | -- | -- | -- | -- |
| 279.95 | 0.779 | 5.46 | -- | -- | -0.408 | -- | -- | 0.132 | -- | 22 | 1293 | -- | -- |
| 286.36 | 0.79 | 5.48 | -- | -- | -- | -- | -- | 0.057 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 128.31 | temperature | 10 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 3 | 128.33 | temperature | 10 | 1440 | > th | dose dependent | rect. | 12 | 8 |
| 41 | 128.72 | temperature | 10 | 1440 | > th | dose dependent | sin | 19 | NA |
| 109 | 128.97 | wind | 9 | 43200 | > th | dose independent | rect. | 20 | 8 |
| 141 | 129.07 | wind | 9 | 43200 | > th | dose independent | rect. | 20 | 4 |
| 175 | 129.18 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 4 |
| 185 | 129.21 | wind | 9 | 43200 | < th | dose independent | rect. | 20 | 4 |
| 186 | 129.21 | wind | 9 | 43200 | < th | dose independent | rect. | 20 | 8 |
| 217 | 129.30 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 9 |
| 246 | 129.37 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 309 | 129.52 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 4 |
| 366 | 129.63 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 393 | 129.68 | temperature | 30 | 1440 | < th | dose dependent | sin | 19 | NA |
| 430 | 129.74 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 557 | 129.92 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |
| 595 | 130.00 | temperature | 30 | 1440 | < th | dose dependent | rect. | 8 | 13 |
| 630 | 130.04 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 682 | 130.13 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 23 |
| 961 | 130.57 | temperature | 30 | 720 | < th | dose dependent | rect. | 12 | 21 |