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Os02g0467200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.6 (0.0202) R2 : 0.325
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.735 (0.0521) R2dC : 0.296 R2C : 0.293
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.172 (0.0425) R2dN8 : 0.0314 R2N8 : 0.0285
σ : 0.381
deviance : 66.29
__
_____
C
peak time of C : 16.4
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
60.3 0.365 10.6 0.00412 0.686 0.408 0.403 0.648 -0.172 17.1 40.18 15 -- --
61.26 0.365 10.6 0.0128 0.685 0.414 0.481 -- -0.171 17 40.66 14 -- --
60.66 0.363 10.6 0.00701 0.69 0.405 -- 0.719 -0.171 17 41.16 15 -- --
61.82 0.366 10.6 0.0207 0.687 0.417 -- -- -0.17 17 40.67 14 -- --
79.81 0.416 10.6 -0.0561 -- 0.651 -- 0.398 -0.251 -- 30.08 187 -- --
65.71 0.38 10.6 0.0308 0.733 -- 0.447 -- -0.171 16.4 -- -- -- --
66.25 0.381 10.6 0.0344 0.736 -- -- -- -0.168 16.4 -- -- -- --
79.11 0.414 10.6 -0.0552 -- 0.622 -- -- -0.189 -- 20.08 260 -- --
61.84 0.366 10.6 -- 0.687 0.419 -- -- -0.172 17 40.64 14 -- --
95.29 0.456 10.6 0.00549 -- -- -- -- -0.188 -- -- -- -- --
66.29 0.381 10.6 -- 0.735 -- -- -- -0.172 16.4 -- -- -- --
66.12 0.379 10.6 -- -- 0.734 -- -- -0.233 -- 0.17 547 -- --
95.29 0.456 10.6 -- -- -- -- -- -0.188 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 54.87 temperature 10.0 90 > th dose dependent rect. 8 7
15 55.94 humidity 50.0 30 > th dose independent rect. 8 7
18 56.00 atmosphere 1010.0 90 < th dose independent rect. 15 17
19 56.04 temperature 15.0 90 > th dose independent rect. 15 17
22 56.17 temperature 10.0 270 > th dose dependent rect. 6 7
32 56.46 temperature 15.0 270 > th dose dependent rect. 8 2
34 56.49 wind 7.0 90 < th dose independent rect. 15 17
38 56.55 wind 1.0 30 > th dose independent rect. 8 7
41 56.59 radiation 40.0 90 < th dose independent rect. 3 16
44 56.68 precipitation 0.1 90 < th dose independent rect. 8 7
46 56.68 precipitation 0.1 90 < th dose dependent rect. 8 7
48 56.70 temperature 15.0 90 > th dose independent rect. 8 7
53 56.78 atmosphere 1015.0 90 < th dose independent rect. 8 7
55 56.78 humidity 50.0 30 > th dose independent rect. 8 18
60 56.81 temperature 10.0 1440 > th dose independent rect. 9 7
63 56.81 temperature 10.0 1440 > th dose independent rect. 16 17
66 56.82 humidity 90.0 90 < th dose independent rect. 8 7
67 56.83 wind 9.0 90 < th dose independent rect. 8 7
68 56.83 atmosphere 995.0 90 > th dose independent rect. 8 7
87 56.93 radiation 40.0 90 < th dose independent rect. 15 17
88 56.94 atmosphere 1010.0 90 < th dose independent rect. 2 6
94 56.99 radiation 1.0 30 > th dose independent rect. 8 7
95 56.99 temperature 10.0 30 > th dose dependent rect. 15 17
98 57.01 wind 9.0 90 < th dose dependent rect. 2 6
101 57.04 wind 5.0 90 < th dose independent rect. 2 6
115 57.08 precipitation 0.1 90 < th dose independent rect. 2 6
117 57.08 precipitation 0.1 90 < th dose dependent rect. 2 6
130 57.13 precipitation 0.1 90 < th dose independent rect. 8 18
131 57.13 precipitation 0.1 90 < th dose dependent rect. 8 18
146 57.22 temperature 10.0 90 > th dose independent rect. 2 6
148 57.22 temperature 30.0 90 < th dose independent rect. 2 6
149 57.22 humidity 50.0 90 > th dose independent rect. 2 6
151 57.22 atmosphere 995.0 90 > th dose independent rect. 2 6
153 57.22 temperature 10.0 90 > th dose independent rect. 8 18
160 57.25 humidity 50.0 270 > th dose independent rect. 6 8
161 57.26 atmosphere 995.0 90 > th dose independent rect. 15 17
163 57.27 radiation 40.0 90 < th dose independent rect. 2 6
171 57.30 wind 9.0 1440 < th dose independent rect. 3 6
172 57.30 temperature 10.0 1440 > th dose independent rect. 3 6
175 57.30 humidity 50.0 1440 > th dose independent rect. 3 6
177 57.30 atmosphere 995.0 1440 > th dose independent rect. 3 6
180 57.30 temperature 10.0 1440 > th dose independent rect. 9 18
190 57.34 precipitation 0.1 90 < th dose independent rect. 15 17
192 57.34 precipitation 0.1 90 < th dose dependent rect. 15 17
194 57.36 radiation 40.0 10 < th dose independent rect. 4 15
208 57.41 atmosphere 1015.0 90 < th dose dependent rect. 3 5
217 57.42 wind 9.0 90 < th dose independent rect. 8 18
254 57.55 atmosphere 995.0 90 > th dose independent rect. 8 18
266 57.58 temperature 10.0 90 > th dose dependent rect. 2 6
325 57.74 radiation 40.0 90 < th dose dependent rect. 3 16
361 57.85 precipitation 0.1 270 < th dose independent rect. 6 8
364 57.85 precipitation 0.1 270 < th dose dependent rect. 6 8
378 57.88 temperature 15.0 270 > th dose independent rect. 6 8
387 57.90 radiation 1.0 270 > th dose independent rect. 6 8
400 57.92 temperature 15.0 90 > th dose independent rect. 17 15
408 57.94 atmosphere 995.0 270 > th dose independent rect. 6 8
409 57.94 atmosphere 1015.0 270 < th dose independent rect. 6 8
422 57.97 wind 9.0 270 < th dose independent rect. 6 8
477 58.09 wind 9.0 90 < th dose independent rect. 3 16
478 58.09 humidity 50.0 270 > th dose independent rect. 19 17
497 58.15 precipitation 0.1 90 < th dose independent rect. 19 8
501 58.15 precipitation 0.1 90 < th dose dependent rect. 19 8
504 58.16 wind 9.0 90 < th dose independent rect. 19 8
507 58.17 temperature 10.0 90 > th dose independent rect. 19 8
508 58.17 temperature 30.0 90 < th dose independent rect. 19 8
509 58.17 humidity 50.0 90 > th dose independent rect. 19 8
511 58.17 atmosphere 995.0 90 > th dose independent rect. 19 8
512 58.17 radiation 1.0 90 < th dose independent rect. 19 8
519 58.17 temperature 10.0 90 > th dose independent rect. 3 16
520 58.17 atmosphere 1015.0 90 < th dose independent rect. 3 16
522 58.17 radiation 1.0 90 < th dose dependent rect. 19 8
527 58.17 wind 9.0 90 < th dose dependent rect. 15 17
540 58.21 radiation 20.0 270 < th dose independent rect. 24 8
556 58.22 atmosphere 1015.0 90 < th dose dependent rect. 15 17
562 58.24 radiation 40.0 10 < th dose independent rect. 12 20
585 58.29 atmosphere 1015.0 270 < th dose dependent rect. 3 2
616 58.34 wind 9.0 270 < th dose independent rect. 11 8
617 58.34 atmosphere 1010.0 270 < th dose independent rect. 23 9
646 58.38 humidity 50.0 90 > th dose independent rect. 15 17
659 58.39 atmosphere 1015.0 1440 < th dose independent rect. 4 5
680 58.41 humidity 50.0 10 > th dose independent rect. 15 17
696 58.42 radiation 40.0 270 < th dose dependent rect. 24 8
706 58.44 radiation 40.0 90 < th dose dependent rect. 15 17
707 58.45 temperature 10.0 270 > th dose independent rect. 11 8
708 58.45 atmosphere 1015.0 270 < th dose independent rect. 11 8
709 58.45 temperature 10.0 270 > th dose independent rect. 19 16
710 58.45 atmosphere 995.0 270 > th dose independent rect. 19 16
713 58.46 wind 9.0 270 < th dose independent rect. 19 16
736 58.49 wind 7.0 270 < th dose dependent rect. 3 2
740 58.50 precipitation 0.1 90 < th dose independent rect. 3 16
743 58.50 precipitation 0.1 90 < th dose dependent rect. 3 16
749 58.51 atmosphere 1015.0 30 < th dose dependent rect. 8 7
751 58.51 humidity 50.0 90 > th dose dependent rect. 19 8
764 58.53 temperature 15.0 270 > th dose independent rect. 23 9
770 58.53 radiation 1.0 10 > th dose dependent rect. 8 7
788 58.57 precipitation 0.1 270 < th dose independent rect. 11 8
792 58.57 precipitation 0.1 270 < th dose dependent rect. 11 8
796 58.58 radiation 1.0 270 > th dose dependent rect. 9 1
807 58.59 radiation 30.0 270 > th dose dependent rect. 9 1
825 58.60 humidity 50.0 90 > th dose dependent rect. 2 6
831 58.61 wind 1.0 270 > th dose independent rect. 11 8
852 58.63 radiation 1.0 90 > th dose dependent rect. 8 6
875 58.64 precipitation 0.1 90 < th dose independent rect. 8 9
888 58.64 precipitation 0.1 90 < th dose dependent rect. 8 9
908 58.66 atmosphere 995.0 90 > th dose dependent rect. 19 8
919 58.68 precipitation 0.1 270 < th dose independent rect. 3 2
929 58.68 precipitation 0.1 270 < th dose dependent rect. 3 2
937 58.69 temperature 10.0 90 > th dose independent rect. 8 9
938 58.69 atmosphere 1015.0 90 < th dose independent rect. 8 9
953 58.71 atmosphere 1000.0 270 > th dose independent rect. 19 6
986 58.74 wind 3.0 270 < th dose independent rect. 3 2
988 58.74 radiation 40.0 90 < th dose independent rect. 17 15