Os02g0466400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Inositol phosphate kinase.
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Os02g0466400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Inositol phosphate kinase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 82.61 | 0.427 | 2.92 | 0.19 | 0.135 | 0.337 | 0.663 | 0.793 | 0.112 | 9.85 | 23.9 | 59 | -- | -- |
| 85.6 | 0.431 | 2.89 | 0.476 | 0.128 | 0.354 | 0.483 | -- | 0.191 | 9.05 | 24 | 56 | -- | -- |
| 84.15 | 0.427 | 2.92 | 0.266 | 0.133 | 0.333 | -- | 0.634 | 0.125 | 9.37 | 23.9 | 64 | -- | -- |
| 86.32 | 0.433 | 2.89 | 0.479 | 0.129 | 0.353 | -- | -- | 0.192 | 9.58 | 23.95 | 60 | -- | -- |
| 85.16 | 0.43 | 2.92 | 0.263 | -- | 0.321 | -- | 0.629 | 0.122 | -- | 24 | 64 | -- | -- |
| 94.64 | 0.456 | 2.93 | 0.328 | 0.13 | -- | 0.54 | -- | 0.0322 | 6.77 | -- | -- | -- | -- |
| 95.33 | 0.457 | 2.93 | 0.336 | 0.135 | -- | -- | -- | 0.0302 | 5.99 | -- | -- | -- | -- |
| 87.31 | 0.435 | 2.9 | 0.478 | -- | 0.339 | -- | -- | 0.187 | -- | 23.99 | 64 | -- | -- |
| 92.19 | 0.447 | 2.91 | -- | 0.124 | 0.286 | -- | -- | 0.111 | 8.48 | 24 | 72 | -- | -- |
| 96.28 | 0.458 | 2.93 | 0.34 | -- | -- | -- | -- | 0.0333 | -- | -- | -- | -- | -- |
| 98.31 | 0.464 | 2.94 | -- | 0.14 | -- | -- | -- | -0.00722 | 5.88 | -- | -- | -- | -- |
| 93.02 | 0.449 | 2.92 | -- | -- | 0.276 | -- | -- | 0.108 | -- | 23.9 | 64 | -- | -- |
| 99.33 | 0.465 | 2.94 | -- | -- | -- | -- | -- | -0.00444 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 78.22 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 5 | 11 |
| 3 | 78.85 | temperature | 25.0 | 90 | < th | dose dependent | sin | 1 | NA |
| 10 | 80.55 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 5 | 7 |
| 40 | 81.91 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 23 | 17 |
| 63 | 82.47 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 1 | 20 |
| 76 | 82.72 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 7 | 9 |
| 136 | 83.39 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 9 | 7 |
| 146 | 83.47 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 9 | 4 |
| 147 | 83.47 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 9 | 4 |
| 156 | 83.55 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 4 | 19 |
| 173 | 83.72 | humidity | 90.0 | 720 | > th | dose independent | rect. | 10 | 3 |
| 179 | 83.74 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 10 | 1 |
| 181 | 83.75 | humidity | 90.0 | 720 | > th | dose independent | rect. | 10 | 1 |
| 191 | 83.85 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 23 | 12 |
| 199 | 83.93 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 9 | 2 |
| 201 | 83.93 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 9 | 2 |
| 213 | 84.06 | temperature | 25.0 | 270 | < th | dose dependent | no | NA | NA |
| 250 | 84.20 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 13 | 23 |
| 253 | 84.22 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 265 | 84.29 | temperature | 15.0 | 90 | > th | dose dependent | sin | 5 | NA |
| 437 | 85.07 | wind | 1.0 | 10 | < th | dose dependent | rect. | 11 | 1 |
| 457 | 85.16 | temperature | 25.0 | 30 | < th | dose independent | rect. | 5 | 12 |
| 473 | 85.20 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 7 | 5 |
| 477 | 85.21 | wind | 1.0 | 90 | < th | dose dependent | rect. | 11 | 1 |
| 558 | 85.51 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 18 | 23 |
| 597 | 85.66 | humidity | 80.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 606 | 85.68 | humidity | 80.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 613 | 85.70 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 9 | 3 |
| 648 | 85.83 | humidity | 80.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 654 | 85.85 | temperature | 20.0 | 90 | < th | dose independent | rect. | 5 | 7 |
| 690 | 85.94 | temperature | 20.0 | 90 | < th | dose independent | rect. | 5 | 3 |
| 730 | 86.03 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 731 | 86.04 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 9 | 1 |
| 748 | 86.07 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 763 | 86.09 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 6 | 6 |
| 796 | 86.16 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 825 | 86.22 | wind | 1.0 | 90 | < th | dose independent | rect. | 11 | 1 |
| 840 | 86.23 | wind | 1.0 | 10 | < th | dose independent | rect. | 11 | 1 |
| 971 | 86.45 | temperature | 20.0 | 90 | < th | dose independent | sin | 1 | NA |