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Os02g0465000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.6 (0.0181) R2 : 0.0129
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0931 (0.0382) R2dN8 : 0.0166 R2N8 : 0.0129
σ : 0.342
deviance : 53.56
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
19.81 0.209 12.7 -1.21 0.523 0.214 0.168 -1.5 -0.135 22.9 25.5 5267 -- --
20.58 0.211 12.7 -0.915 0.539 0.27 0.0923 -- -0.0672 22.9 19.8 5915 -- --
19.93 0.208 12.7 -1.21 0.522 0.215 -- -1.48 -0.136 22.9 25.54 5269 -- --
20.61 0.211 12.7 -0.918 0.538 0.273 -- -- -0.0687 22.8 19.81 5907 -- --
35.36 0.277 12.7 -1.22 -- 0.372 -- -1.34 -0.14 -- 25.67 3744 -- --
21.81 0.219 12.7 -0.728 0.539 -- 0.109 -- 0.00975 22.9 -- -- -- --
21.86 0.219 12.7 -0.733 0.538 -- -- -- 0.0095 22.9 -- -- -- --
35.83 0.279 12.7 -0.845 -- 0.362 -- -- -0.0936 -- 24.7 2276 -- --
26.36 0.239 12.6 -- 0.546 -0.463 -- -- 0.242 22.9 21.01 47520 -- --
39.84 0.295 12.7 -0.721 -- -- -- -- 0.013 -- -- -- -- --
36.01 0.281 12.7 -- 0.533 -- -- -- 0.0911 22.8 -- -- -- --
44.85 0.312 12.6 -- -- -0.439 -- -- 0.237 -- 21.06 47520 -- --
53.56 0.342 12.6 -- -- -- -- -- 0.0931 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 18.88 temperature 25.0 270 < th dose independent rect. 17 14
2 18.89 temperature 30.0 270 < th dose dependent rect. 16 14
4 18.91 temperature 25.0 270 < th dose independent rect. 23 8
13 19.02 temperature 20.0 10 > th dose independent rect. 23 13
16 19.02 temperature 10.0 270 > th dose dependent rect. 17 10
26 19.12 temperature 30.0 270 < th dose dependent rect. 23 8
30 19.15 temperature 25.0 270 < th dose independent sin 10 NA
44 19.20 temperature 20.0 10 > th dose independent rect. 23 6
45 19.20 temperature 20.0 90 > th dose independent rect. 9 19
46 19.20 temperature 15.0 270 > th dose dependent rect. 20 7
57 19.23 temperature 20.0 10 > th dose independent rect. 18 11
61 19.26 radiation 40.0 270 < th dose independent rect. 7 20
62 19.26 temperature 20.0 270 > th dose dependent rect. 21 5
68 19.27 temperature 20.0 90 > th dose independent rect. 22 6
71 19.27 temperature 20.0 10 > th dose independent rect. 9 20
76 19.29 radiation 40.0 90 < th dose dependent rect. 9 18
104 19.35 temperature 20.0 270 > th dose independent rect. 18 9
110 19.35 temperature 10.0 10 > th dose dependent rect. 23 13
126 19.39 temperature 20.0 270 > th dose dependent rect. 23 1
136 19.42 temperature 20.0 720 > th dose independent rect. 15 4
149 19.44 temperature 20.0 10 > th dose dependent rect. 23 6
165 19.47 temperature 25.0 4320 > th dose independent rect. 18 9
175 19.48 humidity 80.0 43200 < th dose dependent rect. 8 1
182 19.49 temperature 10.0 270 > th dose dependent rect. 21 14
186 19.50 temperature 25.0 270 < th dose independent rect. 3 3
212 19.52 radiation 1.0 720 < th dose dependent rect. 17 6
238 19.54 temperature 20.0 270 > th dose independent rect. 23 1
246 19.54 temperature 15.0 10 > th dose dependent rect. 21 8
269 19.56 temperature 25.0 4320 < th dose independent rect. 18 9
279 19.57 wind 7.0 270 < th dose independent rect. 22 13
297 19.59 temperature 25.0 4320 > th dose independent rect. 18 2
306 19.59 temperature 25.0 4320 > th dose dependent rect. 18 1
311 19.60 atmosphere 1015.0 90 < th dose independent rect. 23 13
328 19.62 radiation 20.0 90 < th dose independent rect. 9 18
336 19.63 temperature 20.0 270 > th dose independent rect. 22 3
347 19.64 temperature 10.0 270 > th dose independent rect. 11 11
353 19.64 temperature 10.0 270 > th dose independent rect. 22 13
355 19.64 atmosphere 995.0 270 > th dose independent rect. 22 13
372 19.65 wind 5.0 270 < th dose independent rect. 16 10
378 19.65 temperature 30.0 270 < th dose dependent rect. 3 3
398 19.66 temperature 25.0 4320 > th dose dependent rect. 17 12
430 19.68 temperature 25.0 4320 > th dose independent sin 11 NA
432 19.68 precipitation 0.1 270 < th dose independent rect. 3 3
436 19.68 wind 9.0 90 < th dose independent rect. 12 11
439 19.68 precipitation 0.1 270 < th dose dependent rect. 3 3
443 19.68 temperature 25.0 4320 > th dose dependent rect. 17 9
454 19.69 temperature 25.0 4320 > th dose independent rect. 18 17
461 19.69 temperature 30.0 90 < th dose dependent rect. 3 6
468 19.69 radiation 40.0 270 < th dose dependent rect. 7 19
471 19.70 temperature 25.0 4320 < th dose independent rect. 18 2
489 19.71 radiation 10.0 4320 < th dose independent rect. 8 2
490 19.71 wind 7.0 270 < th dose independent rect. 3 3
491 19.71 atmosphere 1010.0 270 < th dose independent rect. 3 3
501 19.71 wind 9.0 270 < th dose independent rect. 6 21
512 19.72 temperature 10.0 270 > th dose independent rect. 3 3
515 19.72 humidity 50.0 270 > th dose independent rect. 3 3
518 19.72 atmosphere 995.0 270 > th dose independent rect. 3 3
520 19.72 radiation 20.0 270 < th dose independent rect. 3 3
523 19.72 temperature 10.0 1440 > th dose independent rect. 13 11
528 19.72 temperature 10.0 1440 > th dose independent rect. 24 13
532 19.72 atmosphere 995.0 1440 > th dose independent rect. 24 13
534 19.72 temperature 10.0 270 > th dose independent rect. 6 21
535 19.72 precipitation 0.1 270 < th dose independent rect. 6 21
548 19.72 precipitation 0.1 270 < th dose dependent rect. 6 21
549 19.73 radiation 40.0 43200 > th dose independent rect. 7 1
552 19.73 temperature 25.0 4320 < th dose independent rect. 18 4
564 19.73 atmosphere 1015.0 30 < th dose independent rect. 12 11
580 19.73 radiation 40.0 43200 > th dose dependent rect. 7 1
583 19.73 radiation 30.0 270 < th dose dependent rect. 3 3
614 19.74 precipitation 0.1 30 < th dose independent rect. 12 11
617 19.74 humidity 50.0 270 > th dose independent rect. 22 13
618 19.74 precipitation 0.1 270 < th dose independent rect. 22 13
622 19.74 temperature 30.0 270 < th dose dependent sin 11 NA
630 19.74 precipitation 0.1 30 < th dose dependent rect. 12 11
631 19.74 precipitation 0.1 270 < th dose dependent rect. 22 13
634 19.75 temperature 25.0 4320 < th dose independent sin 12 NA
636 19.75 atmosphere 1005.0 43200 > th dose independent rect. 22 5
642 19.75 humidity 70.0 43200 > th dose independent rect. 2 8
658 19.75 wind 1.0 14400 < th dose dependent rect. 22 6
670 19.76 atmosphere 1005.0 43200 > th dose independent rect. 2 1
673 19.76 wind 5.0 720 < th dose independent rect. 23 4
689 19.76 radiation 40.0 720 < th dose independent rect. 15 19
705 19.77 atmosphere 1005.0 43200 < th dose independent rect. 21 1
706 19.77 atmosphere 1005.0 43200 > th dose independent rect. 24 3
709 19.77 humidity 70.0 43200 > th dose independent rect. 4 6
710 19.77 atmosphere 1005.0 43200 < th dose independent rect. 21 6
725 19.77 radiation 40.0 270 < th dose independent rect. 21 14
727 19.77 temperature 25.0 4320 < th dose independent rect. 18 17
737 19.77 wind 9.0 270 < th dose dependent rect. 15 11
752 19.78 radiation 1.0 270 < th dose independent rect. 3 3
767 19.78 radiation 40.0 270 < th dose independent rect. 7 9
788 19.79 atmosphere 1005.0 43200 > th dose independent rect. 21 1
789 19.79 atmosphere 1005.0 43200 < th dose independent rect. 2 1
793 19.79 humidity 70.0 43200 > th dose independent rect. 7 3
810 19.79 atmosphere 1015.0 270 < th dose independent rect. 6 21
820 19.79 atmosphere 995.0 30 > th dose dependent rect. 12 11
839 19.80 humidity 70.0 43200 < th dose independent rect. 1 9
850 19.80 humidity 50.0 270 > th dose dependent rect. 3 3
869 19.81 radiation 10.0 1440 < th dose independent rect. 11 1
875 19.81 wind 9.0 720 < th dose independent rect. 15 4
901 19.81 wind 7.0 14400 < th dose dependent rect. 19 1
930 19.82 radiation 10.0 4320 < th dose dependent rect. 9 1
967 19.83 radiation 40.0 720 < th dose independent rect. 7 12
973 19.83 temperature 20.0 30 > th dose independent rect. 18 18
974 19.83 atmosphere 1015.0 90 < th dose independent rect. 9 18
975 19.83 temperature 25.0 4320 > th dose dependent sin 13 NA
977 19.83 wind 1.0 14400 < th dose dependent rect. 24 3
985 19.83 wind 9.0 90 < th dose dependent rect. 17 11