Os02g0461900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0461900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30.16 | 0.258 | 11.5 | -0.748 | 1.04 | 0.552 | -0.345 | 3.4 | -0.148 | 21.5 | 0.8709 | 11583 | -- | -- |
| 34.29 | 0.273 | 11.3 | -0.115 | 1.06 | 0.442 | -0.245 | -- | 0.125 | 21.4 | 48.33 | 19330 | -- | -- |
| 30.37 | 0.257 | 11.5 | -0.721 | 1.04 | 0.556 | -- | 3.33 | -0.14 | 21.5 | 0.7721 | 11465 | -- | -- |
| 34.48 | 0.273 | 11.3 | -0.117 | 1.06 | 0.437 | -- | -- | 0.125 | 21.4 | 224.9 | 19312 | -- | -- |
| 69.92 | 0.392 | 11.3 | -0.0206 | -- | 0.565 | -- | -0.152 | -0.0212 | -- | 0.8371 | 13180 | -- | -- |
| 40.89 | 0.3 | 11.4 | -0.0591 | 1.04 | -- | -0.249 | -- | -0.0228 | 21.4 | -- | -- | -- | -- |
| 41.12 | 0.3 | 11.4 | -0.05 | 1.04 | -- | -- | -- | -0.0225 | 21.4 | -- | -- | -- | -- |
| 70.01 | 0.391 | 11.3 | -0.0726 | -- | 0.599 | -- | -- | -0.0218 | -- | 9.435 | 18975 | -- | -- |
| 34.84 | 0.275 | 11.3 | -- | 1.06 | 0.422 | -- | -- | 0.133 | 21.3 | 346.9 | 19281 | -- | -- |
| 104.81 | 0.478 | 11.3 | -0.0438 | -- | -- | -- | -- | -0.026 | -- | -- | -- | -- | -- |
| 41.19 | 0.3 | 11.4 | -- | 1.04 | -- | -- | -- | -0.0169 | 21.4 | -- | -- | -- | -- |
| 70.15 | 0.391 | 11.3 | -- | -- | 0.598 | -- | -- | -0.0137 | -- | 9.435 | 18975 | -- | -- |
| 104.86 | 0.478 | 11.3 | -- | -- | -- | -- | -- | -0.0211 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 28.95 | temperature | 20 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 2 | 29.01 | temperature | 20 | 43200 | > th | dose independent | rect. | 7 | 19 |
| 4 | 29.02 | temperature | 20 | 43200 | < th | dose independent | rect. | 14 | 11 |
| 5 | 29.02 | temperature | 20 | 43200 | > th | dose independent | rect. | 11 | 14 |
| 10 | 29.03 | temperature | 20 | 43200 | > th | dose independent | sin | 17 | NA |
| 12 | 29.03 | temperature | 20 | 43200 | < th | dose independent | rect. | 19 | 4 |
| 24 | 29.03 | temperature | 25 | 43200 | < th | dose dependent | rect. | 9 | 12 |
| 25 | 29.04 | temperature | 20 | 43200 | < th | dose independent | sin | 17 | NA |
| 31 | 29.04 | temperature | 20 | 43200 | > th | dose independent | rect. | 14 | 11 |
| 42 | 29.04 | temperature | 20 | 43200 | < th | dose independent | rect. | 7 | 18 |
| 54 | 29.05 | temperature | 25 | 43200 | < th | dose dependent | rect. | 13 | 8 |
| 79 | 29.06 | temperature | 25 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 80 | 29.06 | temperature | 25 | 43200 | < th | dose dependent | rect. | 14 | 6 |
| 88 | 29.07 | temperature | 20 | 43200 | > th | dose independent | rect. | 17 | 8 |
| 169 | 29.10 | temperature | 25 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 232 | 29.13 | temperature | 25 | 43200 | < th | dose dependent | sin | 21 | NA |
| 233 | 29.13 | temperature | 25 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 245 | 29.14 | temperature | 20 | 43200 | > th | dose independent | rect. | 20 | 3 |
| 369 | 29.19 | wind | 9 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 396 | 29.21 | temperature | 20 | 43200 | > th | dose independent | no | NA | NA |
| 407 | 29.21 | temperature | 20 | 43200 | > th | dose independent | rect. | 12 | 22 |
| 408 | 29.21 | temperature | 20 | 43200 | > th | dose independent | rect. | 18 | 22 |
| 411 | 29.21 | temperature | 20 | 43200 | > th | dose independent | rect. | 10 | 23 |
| 414 | 29.21 | temperature | 20 | 43200 | > th | dose independent | rect. | 14 | 23 |
| 424 | 29.22 | temperature | 20 | 43200 | < th | dose independent | no | NA | NA |
| 442 | 29.22 | temperature | 20 | 43200 | < th | dose independent | rect. | 11 | 22 |
| 444 | 29.22 | temperature | 20 | 43200 | < th | dose independent | rect. | 18 | 22 |
| 518 | 29.24 | temperature | 20 | 43200 | < th | dose independent | rect. | 14 | 19 |
| 622 | 29.28 | temperature | 20 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 711 | 29.32 | wind | 1 | 43200 | > th | dose dependent | rect. | 3 | 2 |
| 748 | 29.34 | humidity | 70 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 766 | 29.36 | temperature | 20 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 777 | 29.36 | humidity | 50 | 43200 | > th | dose dependent | rect. | 20 | 2 |
| 785 | 29.37 | temperature | 20 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 966 | 29.49 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 18 |
| 999 | 29.51 | humidity | 50 | 43200 | > th | dose dependent | rect. | 18 | 6 |