Os02g0461700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os02g0461700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 206.54 | 0.675 | 5.63 | -1.48 | 0.148 | 1.69 | 0.223 | 5.44 | -0.482 | 7.76 | 0.8317 | 4242 | -- | -- |
| 219.79 | 0.69 | 5.48 | -0.57 | 0.227 | 0.807 | 0.96 | -- | -0.239 | 8.83 | 4.465 | 12821 | -- | -- |
| 206.65 | 0.67 | 5.63 | -1.46 | 0.127 | 1.7 | -- | 5.46 | -0.481 | 7.77 | 0.83 | 4232 | -- | -- |
| 215.8 | 0.684 | 5.47 | -0.242 | 0.324 | 0.908 | -- | -- | -0.177 | 9.52 | 2.565 | 21511 | -- | -- |
| 207.07 | 0.67 | 5.63 | -1.43 | -- | 1.73 | -- | 5.47 | -0.473 | -- | 0.83 | 4202 | -- | -- |
| 235.21 | 0.719 | 5.54 | -0.788 | 0.34 | -- | 0.658 | -- | -0.469 | 10.1 | -- | -- | -- | -- |
| 236.9 | 0.721 | 5.54 | -0.761 | 0.335 | -- | -- | -- | -0.467 | 10.3 | -- | -- | -- | -- |
| 214.92 | 0.683 | 5.45 | -0.0339 | -- | 1.24 | -- | -- | -0.0344 | -- | 2.937 | 31208 | -- | -- |
| 212.87 | 0.68 | 5.44 | -- | 0.232 | 1.14 | -- | -- | -0.0612 | 9.31 | 2.612 | 31512 | -- | -- |
| 243.76 | 0.73 | 5.54 | -0.767 | -- | -- | -- | -- | -0.468 | -- | -- | -- | -- | -- |
| 252.17 | 0.743 | 5.52 | -- | 0.34 | -- | -- | -- | -0.382 | 10.5 | -- | -- | -- | -- |
| 214.95 | 0.683 | 5.45 | -- | -- | 1.27 | -- | -- | -0.0203 | -- | 2.935 | 31208 | -- | -- |
| 259.26 | 0.752 | 5.53 | -- | -- | -- | -- | -- | -0.383 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 205.89 | radiation | 10.0 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 2 | 206.06 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 15 | 2 |
| 4 | 206.09 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 18 | 8 |
| 5 | 206.09 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 15 | 14 |
| 6 | 206.10 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 15 | 10 |
| 8 | 206.11 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 15 | 5 |
| 9 | 206.11 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 15 | 8 |
| 17 | 206.13 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 18 | 11 |
| 22 | 206.28 | radiation | 1.0 | 4320 | > th | dose dependent | rect. | 15 | 14 |
| 23 | 206.29 | radiation | 1.0 | 4320 | > th | dose dependent | rect. | 15 | 4 |
| 48 | 206.42 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 18 | 23 |
| 52 | 206.54 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 59 | 206.62 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 7 | 22 |
| 75 | 206.72 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 7 | 19 |
| 96 | 207.12 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 9 | 20 |
| 105 | 207.25 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 9 | 17 |
| 124 | 207.32 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 18 | 21 |
| 135 | 207.40 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 14 | 2 |
| 155 | 207.53 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 157 | 207.54 | radiation | 1.0 | 4320 | < th | dose dependent | sin | 17 | NA |
| 207 | 207.67 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 14 | 17 |
| 221 | 207.75 | radiation | 20.0 | 4320 | > th | dose independent | sin | 13 | NA |
| 236 | 207.82 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 14 | 9 |
| 237 | 207.82 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 14 | 11 |
| 251 | 207.86 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 256 | 207.87 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 16 | 23 |
| 267 | 207.97 | radiation | 30.0 | 4320 | > th | dose independent | rect. | 14 | 18 |
| 273 | 208.01 | radiation | 30.0 | 4320 | > th | dose independent | rect. | 14 | 3 |
| 288 | 208.01 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 4 | 22 |
| 294 | 208.05 | radiation | 1.0 | 4320 | < th | dose dependent | no | NA | NA |
| 297 | 208.06 | radiation | 40.0 | 4320 | < th | dose dependent | sin | 13 | NA |
| 302 | 208.06 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 12 | 23 |
| 303 | 208.06 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 21 | 23 |
| 365 | 208.15 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 3 | 22 |
| 373 | 208.17 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 18 | 23 |
| 376 | 208.17 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 18 | 17 |
| 394 | 208.20 | radiation | 30.0 | 4320 | > th | dose independent | rect. | 14 | 20 |
| 439 | 208.26 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 7 | 23 |
| 459 | 208.28 | radiation | 30.0 | 4320 | > th | dose dependent | rect. | 14 | 3 |
| 475 | 208.29 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 23 |
| 526 | 208.35 | radiation | 20.0 | 4320 | > th | dose dependent | sin | 13 | NA |
| 533 | 208.37 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 536 | 208.38 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 544 | 208.46 | radiation | 1.0 | 4320 | > th | dose dependent | sin | 14 | NA |
| 549 | 208.49 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 7 | 23 |
| 551 | 208.50 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 14 | 20 |
| 569 | 208.71 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 572 | 208.73 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 15 | 2 |
| 594 | 208.86 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 16 | 23 |
| 596 | 208.86 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 13 | 21 |
| 597 | 208.87 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 16 | 23 |
| 610 | 208.90 | radiation | 1.0 | 4320 | > th | dose independent | sin | 0 | NA |
| 618 | 208.91 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 636 | 208.95 | radiation | 1.0 | 4320 | > th | dose independent | no | NA | NA |
| 637 | 208.95 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 4 | 15 |
| 677 | 208.95 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 12 | 23 |
| 698 | 208.99 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 4 | 21 |
| 700 | 208.99 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 9 | 23 |
| 705 | 209.00 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 4 | 16 |
| 724 | 209.01 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 12 | 23 |
| 725 | 209.01 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 24 | 23 |
| 727 | 209.02 | radiation | 1.0 | 4320 | < th | dose independent | no | NA | NA |
| 734 | 209.02 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 24 | 20 |
| 739 | 209.02 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 22 | 22 |
| 781 | 209.04 | radiation | 1.0 | 4320 | < th | dose independent | sin | 0 | NA |
| 782 | 209.04 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 799 | 209.06 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 9 | 23 |
| 810 | 209.11 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 816 | 209.12 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 821 | 209.14 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 824 | 209.14 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 848 | 209.16 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 4 | 22 |
| 865 | 209.21 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 880 | 209.25 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 881 | 209.25 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 1 |
| 886 | 209.28 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 7 | 12 |
| 899 | 209.29 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 917 | 209.30 | radiation | 30.0 | 4320 | < th | dose independent | sin | 13 | NA |
| 953 | 209.40 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 16 | 19 |
| 959 | 209.44 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 4 |
| 970 | 209.46 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 4 |
| 974 | 209.46 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 4 |
| 999 | 209.54 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 18 | 1 |