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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0461500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Beta-Ig-H3/fasciclin domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.79 (0.0151) R2 : 0.0491
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.154 (0.0317) R2dN8 : 0.0634 R2N8 : 0.0491
σ : 0.284
deviance : 36.92
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
36.11 0.282 2.78 -0.0165 0.0622 -0.167 -0.0581 0.0761 0.196 7.62 10.59 4380 -- --
36.1 0.28 2.78 -0.0178 0.0636 -0.178 -0.0514 -- 0.2 7.83 10.8 4306 -- --
35.47 0.277 2.76 0.05 0.00321 -0.182 -- 0.447 0.307 9.81 11.04 5100 -- --
35.67 0.278 2.76 -0.0237 0.0127 -0.209 -- -- 0.301 22.6 10.91 5100 -- --
35.43 0.277 2.77 0.0757 -- -0.188 -- 0.563 0.32 -- 10.85 5025 -- --
36.82 0.284 2.79 -0.0139 0.0377 -- -0.0793 -- 0.151 4.84 -- -- -- --
36.84 0.284 2.79 -0.0135 0.0378 -- -- -- 0.152 5.34 -- -- -- --
35.65 0.278 2.76 -0.0272 -- -0.214 -- -- 0.308 -- 10.84 5100 -- --
35.65 0.278 2.76 -- 0.00359 -0.214 -- -- 0.309 13.4 10.87 5025 -- --
36.91 0.284 2.79 -0.0122 -- -- -- -- 0.152 -- -- -- -- --
36.84 0.284 2.79 -- 0.0376 -- -- -- 0.153 5.35 -- -- -- --
35.64 0.278 2.76 -- -- -0.226 -- -- 0.319 -- 10.8 5073 -- --
36.92 0.284 2.79 -- -- -- -- -- 0.154 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 35.05 wind 3.0 30 < th dose dependent rect. 2 1
2 35.05 temperature 15.0 30 > th dose dependent rect. 2 1
4 35.05 atmosphere 1005.0 30 > th dose dependent rect. 2 1
5 35.06 wind 1.0 30 < th dose independent rect. 2 1
7 35.06 wind 9.0 1440 < th dose independent rect. 3 1
8 35.06 temperature 20.0 30 > th dose independent rect. 2 1
9 35.06 temperature 10.0 1440 > th dose independent rect. 3 1
12 35.06 temperature 30.0 1440 < th dose independent rect. 3 1
16 35.06 humidity 50.0 1440 > th dose independent rect. 3 1
25 35.06 atmosphere 1005.0 30 > th dose independent rect. 2 1
26 35.06 atmosphere 995.0 1440 > th dose independent rect. 3 1
27 35.06 radiation 1.0 1440 < th dose independent rect. 3 1
47 35.06 temperature 10.0 1440 > th dose independent rect. 4 23
54 35.06 atmosphere 995.0 30 > th dose dependent rect. 2 1
56 35.06 radiation 1.0 1440 < th dose dependent rect. 3 1
77 35.07 temperature 10.0 30 > th dose independent rect. 2 1
79 35.07 temperature 30.0 30 < th dose independent rect. 2 1
80 35.07 humidity 50.0 30 > th dose independent rect. 2 1
84 35.07 atmosphere 995.0 30 > th dose independent rect. 2 1
86 35.07 atmosphere 1010.0 30 < th dose independent rect. 2 1
88 35.07 radiation 1.0 30 < th dose independent rect. 2 1
93 35.07 precipitation 0.1 30 < th dose independent rect. 2 1
94 35.07 temperature 10.0 30 > th dose independent rect. 3 23
95 35.07 humidity 50.0 30 > th dose dependent rect. 2 1
97 35.07 radiation 1.0 30 < th dose dependent rect. 2 1
102 35.07 precipitation 0.1 30 < th dose dependent rect. 2 1
107 35.10 atmosphere 1015.0 30 < th dose dependent rect. 2 1
111 35.12 temperature 30.0 30 < th dose dependent rect. 2 1
116 35.16 atmosphere 995.0 30 > th dose independent rect. 3 23
117 35.16 temperature 25.0 90 > th dose dependent rect. 1 5
118 35.17 wind 1.0 30 > th dose independent rect. 2 1
122 35.17 temperature 25.0 90 > th dose dependent rect. 1 3
140 35.22 precipitation 0.1 30 < th dose independent rect. 3 23
141 35.22 precipitation 0.1 30 < th dose dependent rect. 3 23
148 35.24 temperature 25.0 720 > th dose independent rect. 1 1
177 35.29 temperature 25.0 1440 < th dose independent rect. 1 1
189 35.40 temperature 25.0 90 > th dose independent rect. 1 5
191 35.44 wind 9.0 30 < th dose independent rect. 3 23
195 35.51 humidity 50.0 30 > th dose independent rect. 16 1
197 35.51 atmosphere 1005.0 30 > th dose independent rect. 16 1
198 35.51 wind 5.0 30 > th dose dependent rect. 16 1
199 35.51 atmosphere 1005.0 30 > th dose dependent rect. 16 1
200 35.52 temperature 30.0 30 < th dose independent rect. 16 1
202 35.53 wind 5.0 10 > th dose independent rect. 16 1
206 35.54 temperature 25.0 720 > th dose dependent rect. 1 1
207 35.54 humidity 50.0 30 > th dose dependent rect. 16 1
210 35.55 humidity 80.0 4320 < th dose dependent rect. 1 1
213 35.56 humidity 50.0 30 > th dose independent rect. 3 23
225 35.62 radiation 10.0 10 < th dose independent rect. 16 1
240 35.66 temperature 30.0 30 < th dose dependent rect. 16 1
261 35.72 radiation 20.0 10 < th dose dependent rect. 16 1
331 35.84 atmosphere 1015.0 30 < th dose independent rect. 3 23
347 35.86 temperature 25.0 270 > th dose dependent rect. 24 7
348 35.86 radiation 10.0 10 < th dose dependent rect. 17 9
355 35.87 radiation 10.0 30 < th dose dependent rect. 15 11
357 35.88 humidity 80.0 4320 < th dose independent rect. 1 1
360 35.88 radiation 10.0 30 < th dose independent rect. 17 9
369 35.89 temperature 25.0 720 < th dose independent rect. 23 6
370 35.89 wind 9.0 30 < th dose independent rect. 17 9
371 35.89 atmosphere 995.0 30 > th dose independent rect. 17 9
372 35.89 wind 9.0 30 < th dose independent rect. 2 15
373 35.89 precipitation 0.1 30 < th dose independent rect. 2 15
377 35.89 precipitation 0.1 30 < th dose dependent rect. 2 15
379 35.90 temperature 10.0 30 > th dose independent rect. 17 9
380 35.90 temperature 10.0 1440 > th dose independent rect. 18 9
383 35.90 humidity 50.0 30 > th dose independent rect. 17 9
384 35.90 humidity 50.0 1440 > th dose independent rect. 18 9
389 35.90 radiation 20.0 1440 < th dose independent rect. 18 9
401 35.90 precipitation 0.1 30 < th dose independent rect. 17 9
402 35.90 temperature 10.0 30 > th dose independent rect. 2 15
404 35.90 temperature 10.0 1440 > th dose independent rect. 3 15
407 35.90 atmosphere 1015.0 30 < th dose independent rect. 2 15
413 35.90 temperature 10.0 30 > th dose dependent rect. 17 9
415 35.90 precipitation 0.1 30 < th dose dependent rect. 17 9
421 35.91 humidity 50.0 30 > th dose independent rect. 2 15
427 35.92 atmosphere 995.0 30 > th dose independent rect. 2 15
468 35.95 humidity 80.0 4320 > th dose independent rect. 1 1
476 35.95 wind 1.0 10 > th dose independent rect. 17 23
489 35.96 temperature 30.0 30 < th dose independent rect. 17 9
507 35.97 humidity 80.0 10 < th dose independent rect. 16 1
515 35.97 wind 1.0 30 > th dose independent rect. 17 9
516 35.97 wind 9.0 10 < th dose independent rect. 17 23
523 35.98 wind 1.0 10 > th dose independent rect. 16 1
525 35.98 wind 9.0 10 < th dose independent rect. 16 1
526 35.98 temperature 10.0 10 > th dose independent rect. 16 1
531 35.98 atmosphere 1010.0 10 < th dose independent rect. 16 1
533 35.98 radiation 1.0 10 > th dose independent rect. 16 1
534 35.98 radiation 30.0 10 < th dose independent rect. 16 1
536 35.98 precipitation 0.1 10 < th dose independent rect. 16 1
546 35.98 temperature 10.0 10 > th dose independent rect. 17 23
548 35.98 precipitation 0.1 10 < th dose dependent rect. 16 1
557 35.99 atmosphere 995.0 10 > th dose independent rect. 16 1
576 36.00 temperature 30.0 10 < th dose independent rect. 2 15
586 36.00 temperature 30.0 30 < th dose independent rect. 3 23
618 36.01 wind 9.0 30 < th dose dependent rect. 17 9
668 36.03 humidity 50.0 30 > th dose dependent rect. 17 9
678 36.04 humidity 90.0 90 < th dose independent rect. 2 1
682 36.04 atmosphere 1015.0 30 < th dose independent rect. 17 9
685 36.04 wind 9.0 4320 > th dose dependent rect. 13 1
698 36.05 atmosphere 1010.0 10 < th dose independent rect. 2 6
728 36.07 wind 9.0 4320 > th dose independent rect. 13 1
735 36.07 wind 1.0 10 > th dose independent rect. 17 11
742 36.07 atmosphere 995.0 30 > th dose dependent rect. 17 9
744 36.07 radiation 10.0 30 < th dose dependent rect. 3 23
763 36.08 wind 9.0 10 < th dose dependent rect. 3 23
766 36.09 temperature 10.0 720 > th dose independent rect. 7 8
769 36.09 atmosphere 1015.0 720 < th dose independent rect. 7 8
774 36.09 temperature 10.0 720 > th dose independent rect. 15 16
777 36.09 temperature 10.0 10 > th dose dependent rect. 16 1
789 36.10 wind 9.0 4320 < th dose independent rect. 13 1
795 36.10 atmosphere 995.0 1440 > th dose independent rect. 18 9
815 36.11 atmosphere 995.0 720 > th dose independent rect. 7 8
826 36.11 atmosphere 1015.0 10 < th dose dependent rect. 16 1
849 36.12 atmosphere 995.0 10 > th dose independent rect. 17 23
850 36.12 radiation 1.0 30 < th dose independent rect. 3 23
889 36.13 precipitation 0.1 720 < th dose independent rect. 15 16
913 36.13 precipitation 0.1 720 < th dose dependent rect. 15 16
917 36.14 humidity 90.0 720 < th dose independent rect. 1 1
968 36.15 temperature 30.0 720 < th dose independent rect. 19 8
978 36.15 radiation 1.0 720 < th dose independent rect. 19 8
993 36.15 wind 1.0 30 > th dose independent rect. 3 23