Os02g0461400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0461400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 194.83 | 0.656 | 6.02 | 0.294 | 0.802 | -1.06 | -0.612 | 0.722 | 0.132 | 18.8 | 20.3 | 200 | -- | -- |
| 196.03 | 0.652 | 6.01 | 0.389 | 0.792 | -1.14 | -0.747 | -- | 0.137 | 18.7 | 20.4 | 214 | -- | -- |
| 194.33 | 0.649 | 6.02 | 0.27 | 0.798 | -1.04 | -- | 0.863 | 0.117 | 18.9 | 20.5 | 213 | -- | -- |
| 197.42 | 0.654 | 6 | 0.41 | 0.782 | -1.12 | -- | -- | 0.145 | 18.9 | 20.41 | 216 | -- | -- |
| 226.86 | 0.702 | 6.01 | 0.239 | -- | -1.15 | -- | 0.723 | 0.0851 | -- | 20.4 | 225 | -- | -- |
| 239.73 | 0.726 | 5.95 | 0.752 | 0.897 | -- | -0.797 | -- | 0.369 | 18 | -- | -- | -- | -- |
| 241.24 | 0.727 | 5.95 | 0.758 | 0.893 | -- | -- | -- | 0.366 | 18.1 | -- | -- | -- | -- |
| 228.39 | 0.704 | 5.99 | 0.298 | -- | -1.34 | -- | -- | 0.117 | -- | 20 | 262 | -- | -- |
| 201.56 | 0.661 | 6.02 | -- | 0.766 | -1.22 | -- | -- | 0.106 | 19 | 20.49 | 220 | -- | -- |
| 282.57 | 0.785 | 5.94 | 0.733 | -- | -- | -- | -- | 0.346 | -- | -- | -- | -- | -- |
| 256.39 | 0.749 | 5.97 | -- | 0.882 | -- | -- | -- | 0.282 | 18.2 | -- | -- | -- | -- |
| 230.57 | 0.707 | 6 | -- | -- | -1.42 | -- | -- | 0.0721 | -- | 19.92 | 265 | -- | -- |
| 296.74 | 0.804 | 5.96 | -- | -- | -- | -- | -- | 0.265 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 182.88 | temperature | 20 | 270 | > th | dose independent | rect. | 17 | 18 |
| 4 | 184.36 | temperature | 20 | 270 | > th | dose independent | rect. | 16 | 20 |
| 13 | 187.26 | temperature | 20 | 270 | > th | dose independent | rect. | 4 | 22 |
| 43 | 193.39 | temperature | 20 | 30 | > th | dose independent | rect. | 6 | 23 |
| 53 | 194.37 | temperature | 20 | 270 | < th | dose independent | rect. | 10 | 21 |
| 75 | 195.94 | temperature | 20 | 30 | > th | dose independent | rect. | 8 | 20 |
| 90 | 196.66 | temperature | 20 | 270 | < th | dose independent | no | NA | NA |
| 97 | 196.77 | temperature | 20 | 270 | < th | dose independent | rect. | 22 | 23 |
| 103 | 196.93 | temperature | 20 | 270 | < th | dose independent | rect. | 15 | 23 |
| 107 | 197.08 | temperature | 20 | 270 | > th | dose independent | no | NA | NA |
| 113 | 197.14 | temperature | 20 | 270 | < th | dose independent | rect. | 2 | 23 |
| 116 | 197.17 | temperature | 20 | 270 | < th | dose independent | rect. | 19 | 23 |
| 118 | 197.20 | temperature | 20 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 122 | 197.23 | temperature | 20 | 270 | > th | dose independent | rect. | 16 | 10 |
| 124 | 197.29 | temperature | 20 | 90 | > th | dose independent | rect. | 18 | 10 |
| 131 | 197.41 | temperature | 20 | 30 | > th | dose independent | rect. | 8 | 18 |
| 150 | 197.90 | humidity | 90 | 720 | < th | dose dependent | rect. | 19 | 13 |
| 173 | 198.48 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 16 |
| 184 | 198.68 | temperature | 20 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 216 | 199.39 | temperature | 20 | 270 | < th | dose independent | sin | 11 | NA |
| 234 | 199.78 | temperature | 20 | 270 | > th | dose independent | sin | 11 | NA |
| 241 | 199.85 | temperature | 20 | 30 | > th | dose independent | rect. | 3 | 23 |
| 313 | 201.09 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 315 | 201.14 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 1 |
| 350 | 201.57 | temperature | 20 | 10 | > th | dose independent | rect. | 21 | 16 |
| 363 | 201.84 | temperature | 20 | 720 | < th | dose independent | rect. | 5 | 19 |
| 369 | 201.97 | humidity | 50 | 720 | > th | dose dependent | rect. | 17 | 11 |
| 386 | 202.17 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 1 |
| 387 | 202.18 | humidity | 80 | 1440 | < th | dose independent | rect. | 23 | 16 |
| 410 | 202.46 | temperature | 20 | 1440 | > th | dose independent | rect. | 19 | 9 |
| 420 | 202.52 | temperature | 20 | 10 | < th | dose independent | rect. | 12 | 21 |
| 424 | 202.57 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 14 |
| 441 | 202.69 | humidity | 80 | 1440 | > th | dose independent | rect. | 24 | 15 |
| 447 | 202.73 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 14 |
| 468 | 202.81 | humidity | 90 | 720 | < th | dose dependent | sin | 11 | NA |
| 500 | 202.96 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 8 |
| 516 | 203.02 | temperature | 20 | 30 | > th | dose independent | rect. | 8 | 16 |
| 550 | 203.15 | temperature | 20 | 1440 | > th | dose independent | sin | 11 | NA |
| 607 | 203.37 | temperature | 20 | 1440 | < th | dose independent | sin | 10 | NA |
| 619 | 203.39 | wind | 9 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 623 | 203.41 | temperature | 20 | 10 | < th | dose independent | rect. | 10 | 23 |
| 660 | 203.55 | humidity | 80 | 1440 | < th | dose independent | sin | 6 | NA |
| 728 | 203.83 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 23 |
| 780 | 204.07 | humidity | 80 | 1440 | > th | dose independent | rect. | 2 | 6 |
| 844 | 204.29 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 887 | 204.41 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 23 |
| 928 | 204.50 | temperature | 20 | 1440 | > th | dose independent | rect. | 9 | 23 |
| 955 | 204.59 | wind | 3 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 979 | 204.64 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |