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Os02g0461200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.09 (0.0242) R2 : 0.8
β1 : 1.52 (0.0887) R2dD : 0.127 R2D : 0.0935
β2 : -- (--) R2dC : -- R2C : --
β3 : -2.38 (0.0597) R2dE : 0.693 R2E : 0.671
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.281 (0.0517) R2dN8 : 0.018 R2N8 : -0.00588
σ : 0.453
deviance : 94.49
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_____
C
peak time of C : --
E
wheather : radiation
threshold : 19.28
memory length : 287
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 2.47
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
80.19 0.421 9.08 1.53 3.32 1.37 0.695 1.08 0.338 15 0.06994 15 4.73 --
82.42 0.423 9.11 1.62 3.39 1.4 -0.342 -- 0.304 15 0.03055 19 4.48 --
81.3 0.42 9.08 1.55 3.35 1.36 -- 0.873 0.329 15 0.06205 18 4.92 --
82.42 0.423 9.08 1.57 3.37 1.39 -- -- 0.331 15 0.01996 18 4.29 --
97.77 0.461 9.09 1.45 -- -2.37 -- 0.0106 0.285 -- 56.13 191 2.38 --
112.42 0.497 9.12 1.48 2.4 -- 0.15 -- 0.296 16.5 -- -- -- --
112.48 0.497 9.11 1.48 2.4 -- -- -- 0.297 16.4 -- -- -- --
94.49 0.453 9.09 1.52 -- -2.38 -- -- 0.281 -- 19.28 287 2.47 --
145.18 0.564 9.11 -- 3.55 1.64 -- -- 0.192 14.8 4.908 11 4.73 --
421.84 0.96 9.1 1.39 -- -- -- -- 0.233 -- -- -- -- --
170.58 0.611 9.15 -- 2.38 -- -- -- 0.131 16.5 -- -- -- --
152.31 0.575 9.11 -- -- -2.35 -- -- 0.143 -- 24.98 251 2.29 --
472.85 1.01 9.13 -- -- -- -- -- 0.0788 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 70.65 wind 9.0 270 < th dose independent rect. 6 21
2 70.84 wind 5.0 270 < th dose independent rect. 3 3
3 71.30 precipitation 0.1 270 < th dose independent rect. 3 3
5 71.30 precipitation 0.1 270 < th dose dependent rect. 3 3
7 71.95 atmosphere 1010.0 270 < th dose independent rect. 3 3
9 72.13 temperature 10.0 270 > th dose independent rect. 3 3
11 72.13 temperature 30.0 270 < th dose independent rect. 3 3
12 72.13 humidity 50.0 270 > th dose independent rect. 3 3
15 72.13 atmosphere 995.0 270 > th dose independent rect. 3 3
17 72.13 radiation 20.0 270 < th dose independent rect. 3 3
20 72.13 temperature 10.0 270 > th dose independent rect. 6 21
21 72.14 radiation 10.0 270 < th dose independent rect. 2 5
22 72.21 radiation 40.0 270 < th dose dependent rect. 3 3
26 72.45 wind 9.0 270 < th dose independent rect. 5 23
27 72.51 wind 7.0 270 < th dose independent rect. 7 19
28 72.55 precipitation 0.1 270 < th dose independent rect. 6 21
29 72.55 precipitation 0.1 270 < th dose dependent rect. 6 21
32 72.63 wind 9.0 270 < th dose dependent rect. 3 3
37 73.04 radiation 20.0 270 < th dose dependent rect. 2 5
38 73.08 precipitation 0.1 90 < th dose independent rect. 8 20
39 73.08 precipitation 0.1 90 < th dose dependent rect. 8 20
41 73.12 temperature 10.0 270 > th dose dependent rect. 3 3
58 73.37 temperature 10.0 90 > th dose independent rect. 8 20
65 73.66 precipitation 0.1 270 < th dose independent rect. 2 5
66 73.66 precipitation 0.1 270 < th dose dependent rect. 2 5
76 73.99 atmosphere 1010.0 270 < th dose independent rect. 2 5
78 74.11 atmosphere 995.0 90 > th dose dependent rect. 4 4
84 74.24 humidity 70.0 270 > th dose independent rect. 2 5
92 74.33 temperature 10.0 270 > th dose independent rect. 2 5
94 74.33 temperature 30.0 270 < th dose independent rect. 2 5
95 74.33 humidity 50.0 270 > th dose independent rect. 2 5
97 74.33 atmosphere 995.0 270 > th dose independent rect. 2 5
104 74.44 radiation 1.0 270 < th dose dependent rect. 4 1
124 74.65 temperature 10.0 270 > th dose independent rect. 4 1
126 74.65 temperature 30.0 270 < th dose independent rect. 4 1
127 74.65 humidity 50.0 270 > th dose independent rect. 4 1
130 74.65 atmosphere 995.0 270 > th dose independent rect. 4 1
131 74.65 atmosphere 1010.0 270 < th dose independent rect. 4 1
133 74.65 radiation 20.0 270 < th dose independent rect. 4 1
136 74.65 temperature 10.0 270 > th dose independent rect. 5 23
138 74.68 radiation 30.0 270 < th dose dependent rect. 4 1
143 74.79 radiation 1.0 270 < th dose independent rect. 4 1
176 75.02 wind 9.0 270 < th dose dependent rect. 4 1
181 75.10 wind 9.0 270 < th dose dependent rect. 2 5
197 75.20 humidity 50.0 270 > th dose dependent rect. 3 3
201 75.40 radiation 1.0 270 < th dose dependent rect. 3 15
204 75.64 atmosphere 995.0 90 > th dose independent rect. 8 20
215 75.82 temperature 10.0 270 > th dose dependent rect. 2 5
241 76.08 atmosphere 995.0 270 > th dose dependent rect. 4 1
255 76.42 temperature 10.0 270 > th dose dependent rect. 4 1
263 76.60 radiation 1.0 270 < th dose independent rect. 3 15
265 76.62 humidity 50.0 270 > th dose dependent rect. 4 1
285 76.84 atmosphere 1005.0 90 > th dose independent rect. 4 4
301 77.04 radiation 1.0 270 < th dose dependent rect. 3 9
310 77.12 radiation 1.0 270 < th dose independent rect. 3 9
339 77.27 wind 1.0 270 > th dose independent rect. 3 3
369 77.50 radiation 40.0 270 < th dose dependent rect. 15 15
375 77.56 humidity 50.0 270 > th dose dependent rect. 2 5
385 77.67 atmosphere 995.0 270 > th dose independent rect. 6 21
415 77.93 wind 1.0 270 > th dose independent rect. 2 5
478 78.33 wind 9.0 1440 < th dose independent rect. 5 4
479 78.33 temperature 10.0 1440 > th dose independent rect. 5 4
482 78.33 humidity 50.0 1440 > th dose independent rect. 5 4
484 78.33 atmosphere 995.0 1440 > th dose independent rect. 5 4
485 78.33 atmosphere 1015.0 1440 < th dose independent rect. 5 4
486 78.33 temperature 10.0 1440 > th dose independent rect. 9 20
515 78.44 temperature 10.0 30 > th dose dependent rect. 8 20
581 78.88 radiation 20.0 270 < th dose independent rect. 15 15
613 79.12 radiation 1.0 10 > th dose independent rect. 5 3
626 79.16 wind 1.0 270 > th dose independent rect. 7 19
629 79.17 radiation 40.0 10 < th dose dependent rect. 5 3
635 79.27 wind 9.0 90 < th dose dependent rect. 8 20
638 79.29 atmosphere 1005.0 270 > th dose independent rect. 4 1
648 79.37 wind 7.0 270 < th dose independent rect. 16 10
659 79.39 atmosphere 1015.0 90 < th dose independent rect. 8 20
663 79.44 atmosphere 1005.0 10 > th dose independent rect. 5 3
784 80.64 humidity 50.0 270 > th dose independent rect. 14 16
879 81.19 radiation 1.0 270 > th dose independent sin 2 NA
906 81.43 precipitation 0.1 270 < th dose independent rect. 16 10
907 81.43 precipitation 0.1 270 < th dose dependent rect. 16 10
948 81.62 wind 9.0 270 < th dose independent rect. 21 14
960 81.69 radiation 40.0 270 < th dose independent rect. 11 20
979 81.76 temperature 10.0 270 > th dose independent rect. 11 10
980 81.76 temperature 10.0 270 > th dose independent rect. 21 14
981 81.76 atmosphere 995.0 270 > th dose independent rect. 21 14