Os02g0458900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Lipolytic enzyme, G-D-S-L family protein.
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Os02g0458900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Lipolytic enzyme, G-D-S-L family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 147.96 | 0.572 | 3.71 | 0.226 | 0.397 | 1.66 | 0.367 | 1.15 | -0.254 | 12.1 | 23.17 | 525 | -- | -- |
| 149.42 | 0.569 | 3.69 | 0.37 | 0.377 | 1.46 | 0.468 | -- | -0.227 | 11.7 | 23.35 | 559 | -- | -- |
| 148.49 | 0.568 | 3.71 | 0.226 | 0.386 | 1.69 | -- | 1.29 | -0.254 | 12.3 | 23.1 | 544 | -- | -- |
| 150.39 | 0.571 | 3.68 | 0.384 | 0.396 | 1.45 | -- | -- | -0.224 | 12.1 | 23.4 | 536 | -- | -- |
| 156.3 | 0.582 | 3.71 | 0.227 | -- | 1.78 | -- | 1.33 | -0.233 | -- | 23.23 | 673 | -- | -- |
| 176.84 | 0.623 | 3.74 | -0.000653 | 0.486 | -- | 0.497 | -- | -0.464 | 11.1 | -- | -- | -- | -- |
| 177.87 | 0.625 | 3.73 | 0.0202 | 0.483 | -- | -- | -- | -0.462 | 11.3 | -- | -- | -- | -- |
| 158.47 | 0.586 | 3.68 | 0.418 | -- | 1.46 | -- | -- | -0.163 | -- | 25.04 | 706 | -- | -- |
| 153.87 | 0.578 | 3.7 | -- | 0.405 | 1.28 | -- | -- | -0.287 | 12 | 23.44 | 524 | -- | -- |
| 192.46 | 0.648 | 3.75 | 0.00817 | -- | -- | -- | -- | -0.467 | -- | -- | -- | -- | -- |
| 177.88 | 0.624 | 3.74 | -- | 0.483 | -- | -- | -- | -0.464 | 11.3 | -- | -- | -- | -- |
| 162.52 | 0.594 | 3.69 | -- | -- | 1.29 | -- | -- | -0.238 | -- | 25.1 | 685 | -- | -- |
| 192.47 | 0.648 | 3.75 | -- | -- | -- | -- | -- | -0.468 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 146.08 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 2 | 146.16 | temperature | 15 | 720 | > th | dose dependent | rect. | 20 | 12 |
| 5 | 146.41 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 10 |
| 13 | 146.68 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 7 |
| 18 | 147.31 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 17 |
| 19 | 147.32 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 10 |
| 24 | 147.41 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 7 |
| 25 | 147.42 | temperature | 10 | 720 | > th | dose dependent | sin | 9 | NA |
| 43 | 147.90 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 1 |
| 56 | 148.18 | temperature | 30 | 720 | < th | dose dependent | sin | 9 | NA |
| 63 | 148.26 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 17 |
| 66 | 148.30 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 15 |
| 252 | 150.17 | temperature | 25 | 720 | < th | dose dependent | rect. | 23 | 21 |
| 353 | 150.94 | temperature | 20 | 720 | < th | dose dependent | rect. | 4 | 1 |
| 374 | 151.05 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 381 | 151.11 | temperature | 20 | 720 | > th | dose independent | rect. | 20 | 18 |
| 391 | 151.22 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 23 |
| 416 | 151.49 | radiation | 10 | 4320 | < th | dose independent | rect. | 15 | 16 |
| 436 | 151.66 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 23 |
| 439 | 151.69 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 446 | 151.74 | temperature | 15 | 270 | > th | dose dependent | rect. | 2 | 13 |
| 449 | 151.76 | radiation | 1 | 4320 | > th | dose dependent | rect. | 18 | 12 |
| 456 | 151.80 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 473 | 151.94 | radiation | 1 | 4320 | > th | dose dependent | rect. | 4 | 2 |
| 546 | 152.45 | temperature | 20 | 720 | < th | dose independent | rect. | 22 | 14 |
| 563 | 152.53 | radiation | 40 | 4320 | < th | dose dependent | rect. | 1 | 5 |
| 587 | 152.67 | radiation | 40 | 4320 | < th | dose dependent | rect. | 3 | 3 |
| 601 | 152.76 | temperature | 20 | 720 | > th | dose independent | sin | 7 | NA |
| 604 | 152.76 | radiation | 40 | 4320 | < th | dose dependent | rect. | 19 | 11 |
| 607 | 152.78 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 4 |
| 611 | 152.80 | temperature | 20 | 720 | < th | dose independent | sin | 6 | NA |
| 633 | 152.88 | temperature | 20 | 720 | > th | dose independent | rect. | 20 | 13 |
| 677 | 153.07 | radiation | 40 | 4320 | < th | dose dependent | rect. | 21 | 9 |
| 688 | 153.12 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 11 |
| 698 | 153.16 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 760 | 153.38 | radiation | 10 | 4320 | < th | dose independent | sin | 13 | NA |
| 808 | 153.58 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 13 |
| 820 | 153.64 | temperature | 20 | 720 | > th | dose independent | rect. | 2 | 5 |
| 826 | 153.67 | radiation | 10 | 4320 | < th | dose independent | rect. | 18 | 13 |
| 830 | 153.69 | radiation | 10 | 4320 | < th | dose independent | rect. | 1 | 6 |
| 836 | 153.71 | radiation | 10 | 4320 | < th | dose independent | rect. | 4 | 3 |
| 864 | 153.76 | radiation | 10 | 4320 | < th | dose independent | rect. | 22 | 9 |
| 964 | 154.04 | temperature | 10 | 270 | > th | dose dependent | rect. | 9 | 23 |