Os02g0458100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Sesquiterpene cyclase 1.
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Os02g0458100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Sesquiterpene cyclase 1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 123.49 | 0.518 | -322 | 1980 | 0.0889 | -95000 | 0.111 | 581000 | 0.102 | 9.75 | 995 | 10 | -- | -- |
| 120.26 | 0.515 | 2.83 | 0.0447 | 0.086 | 4.09 | 0.111 | -- | 0.103 | 9.66 | 995 | 10 | -- | -- |
| 123.53 | 0.518 | -322 | 1980 | 0.0889 | -95000 | -- | 581000 | 0.102 | 9.75 | 995 | 10 | -- | -- |
| 117.96 | 0.509 | 2.83 | 0.0542 | 0.0791 | 4.56 | -- | -- | 0.101 | 10.4 | 994.7 | 10 | -- | -- |
| 123.99 | 0.519 | -322 | 1980 | -- | -95000 | -- | 581000 | 0.103 | -- | 995 | 10 | -- | -- |
| 138.58 | 0.552 | 2.83 | 0.0772 | 0.09 | -- | 0.0664 | -- | 0.0919 | 12.3 | -- | -- | -- | -- |
| 138.6 | 0.551 | 2.83 | 0.0798 | 0.0898 | -- | -- | -- | 0.0923 | 12.4 | -- | -- | -- | -- |
| 118.34 | 0.509 | 2.83 | 0.0528 | -- | 4.57 | -- | -- | 0.101 | -- | 994.8 | 12 | -- | -- |
| 118.03 | 0.509 | 2.83 | -- | 0.0788 | 4.57 | -- | -- | 0.0952 | 10.4 | 994.8 | 10 | -- | -- |
| 139.11 | 0.551 | 2.83 | 0.0768 | -- | -- | -- | -- | 0.0908 | -- | -- | -- | -- | -- |
| 138.77 | 0.551 | 2.83 | -- | 0.0886 | -- | -- | -- | 0.0834 | 12.3 | -- | -- | -- | -- |
| 118.41 | 0.508 | 2.83 | -- | -- | 4.57 | -- | -- | 0.0951 | -- | 994.8 | 12 | -- | -- |
| 139.26 | 0.551 | 2.83 | -- | -- | -- | -- | -- | 0.0823 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 117.88 | atmosphere | 995 | 10 | > th | dose independent | sin | 6 | NA |
| 5 | 118.27 | atmosphere | 995 | 10 | < th | dose independent | sin | 6 | NA |
| 6 | 118.27 | atmosphere | 995 | 10 | < th | dose dependent | sin | 6 | NA |
| 7 | 118.28 | atmosphere | 995 | 90 | < th | dose independent | rect. | 14 | 1 |
| 8 | 118.28 | atmosphere | 995 | 10 | < th | dose independent | rect. | 15 | 1 |
| 134 | 118.28 | atmosphere | 995 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 135 | 118.28 | atmosphere | 995 | 10 | < th | dose dependent | rect. | 15 | 1 |
| 304 | 120.00 | temperature | 30 | 30 | > th | dose dependent | rect. | 16 | 1 |
| 487 | 123.89 | atmosphere | 995 | 10 | < th | dose dependent | no | NA | NA |
| 700 | 124.25 | temperature | 30 | 10 | > th | dose dependent | sin | 12 | NA |
| 704 | 124.33 | atmosphere | 995 | 10 | > th | dose independent | rect. | 13 | 23 |
| 768 | 127.26 | temperature | 30 | 10 | > th | dose independent | rect. | 15 | 2 |
| 776 | 127.53 | temperature | 20 | 90 | < th | dose dependent | rect. | 24 | 2 |
| 779 | 127.55 | atmosphere | 995 | 30 | > th | dose independent | rect. | 21 | 23 |
| 785 | 127.61 | temperature | 20 | 90 | < th | dose independent | rect. | 24 | 1 |