Os02g0457500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ankyrin repeat containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0457500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Ankyrin repeat containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 179.54 | 0.63 | 5.57 | 1.31 | 0.622 | -2.35 | 0.134 | 2.52 | 0.15 | 22.2 | 15.14 | 3692 | -- | -- |
| 184.73 | 0.633 | 5.65 | 0.761 | 0.621 | -2.46 | 0.28 | -- | 0.00669 | 22.3 | 14.29 | 3729 | -- | -- |
| 179.61 | 0.624 | 5.57 | 1.3 | 0.621 | -2.34 | -- | 2.56 | 0.151 | 22.2 | 15.23 | 3679 | -- | -- |
| 184.97 | 0.633 | 5.66 | 0.738 | 0.629 | -2.43 | -- | -- | -0.00485 | 22.3 | 10.94 | 3729 | -- | -- |
| 197.03 | 0.654 | 5.55 | 1.28 | -- | -2.19 | -- | 2.68 | 0.15 | -- | 14.76 | 3060 | -- | -- |
| 286.3 | 0.793 | 5.76 | -0.295 | 0.468 | -- | 0.0855 | -- | -0.471 | 21.5 | -- | -- | -- | -- |
| 286.33 | 0.792 | 5.76 | -0.298 | 0.469 | -- | -- | -- | -0.471 | 21.5 | -- | -- | -- | -- |
| 203.23 | 0.664 | 5.64 | 0.777 | -- | -2.25 | -- | -- | -0.0163 | -- | 14.3 | 4399 | -- | -- |
| 191.61 | 0.648 | 5.67 | -- | 0.841 | -3.02 | -- | -- | -0.0795 | 16.4 | 11.29 | 3104 | -- | -- |
| 299.24 | 0.808 | 5.74 | -0.295 | -- | -- | -- | -- | -0.473 | -- | -- | -- | -- | -- |
| 288.67 | 0.795 | 5.75 | -- | 0.468 | -- | -- | -- | -0.438 | 21.4 | -- | -- | -- | -- |
| 211.72 | 0.678 | 5.67 | -- | -- | -1.94 | -- | -- | -0.137 | -- | 13.59 | 3054 | -- | -- |
| 301.54 | 0.811 | 5.74 | -- | -- | -- | -- | -- | -0.44 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 173.64 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 2 | 175.58 | temperature | 15 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 3 | 175.77 | temperature | 15 | 4320 | > th | dose dependent | rect. | 19 | 3 |
| 7 | 175.93 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 8 | 175.94 | temperature | 30 | 4320 | < th | dose dependent | rect. | 19 | 3 |
| 11 | 176.05 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 5 |
| 183 | 179.27 | temperature | 30 | 4320 | < th | dose dependent | sin | 15 | NA |
| 226 | 179.76 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 22 |
| 233 | 179.83 | temperature | 15 | 4320 | > th | dose dependent | sin | 15 | NA |
| 667 | 182.17 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 726 | 182.38 | temperature | 25 | 4320 | < th | dose independent | rect. | 12 | 16 |