Os02g0456800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Pollen signalling protein with adenylyl cyclase activity (Fragment).
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Os02g0456800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Pollen signalling protein with adenylyl cyclase activity (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.4 | 0.263 | 11 | 0.202 | 0.633 | 0.529 | -0.0794 | 0.27 | 0.624 | 4.96 | 38.46 | 36 | -- | -- |
| 31.55 | 0.262 | 11.1 | 0.188 | 0.621 | 0.553 | 0.0219 | -- | 0.612 | 4.83 | 41.8 | 46 | -- | -- |
| 31.31 | 0.261 | 11 | 0.203 | 0.622 | 0.549 | -- | 0.249 | 0.624 | 4.97 | 39.07 | 46 | -- | -- |
| 31.53 | 0.262 | 11 | 0.197 | 0.624 | 0.544 | -- | -- | 0.626 | 4.97 | 38.14 | 46 | -- | -- |
| 40.1 | 0.295 | 11.1 | 0.199 | -- | 0.77 | -- | 0.075 | 0.633 | -- | 5.245 | 431 | -- | -- |
| 36.03 | 0.281 | 11.1 | 0.182 | 0.862 | -- | 0.256 | -- | 0.595 | 3.18 | -- | -- | -- | -- |
| 36.24 | 0.282 | 11.1 | 0.177 | 0.864 | -- | -- | -- | 0.594 | 3.21 | -- | -- | -- | -- |
| 40.12 | 0.295 | 11.1 | 0.201 | -- | 0.772 | -- | -- | 0.633 | -- | 5.5 | 431 | -- | -- |
| 32.44 | 0.265 | 11.1 | -- | 0.642 | 0.584 | -- | -- | 0.598 | 4.7 | 50.57 | 52 | -- | -- |
| 78.56 | 0.414 | 11.1 | 0.214 | -- | -- | -- | -- | 0.616 | -- | -- | -- | -- | -- |
| 37.07 | 0.285 | 11.1 | -- | 0.867 | -- | -- | -- | 0.574 | 3.21 | -- | -- | -- | -- |
| 41.15 | 0.299 | 11.1 | -- | -- | 0.777 | -- | -- | 0.612 | -- | 6.723 | 428 | -- | -- |
| 79.77 | 0.417 | 11.1 | -- | -- | -- | -- | -- | 0.593 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.43 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 15 | 14 |
| 16 | 28.54 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 16 | 10 |
| 44 | 28.98 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 15 | 7 |
| 65 | 29.21 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 16 | 3 |
| 68 | 29.24 | temperature | 10.0 | 270 | > th | dose dependent | sin | 15 | NA |
| 89 | 29.39 | temperature | 25.0 | 270 | > th | dose independent | rect. | 15 | 5 |
| 92 | 29.40 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 19 | 9 |
| 116 | 29.53 | temperature | 25.0 | 720 | > th | dose independent | rect. | 17 | 2 |
| 131 | 29.58 | temperature | 30.0 | 90 | < th | dose dependent | sin | 13 | NA |
| 132 | 29.58 | temperature | 30.0 | 270 | < th | dose dependent | sin | 15 | NA |
| 149 | 29.64 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 16 | 12 |
| 229 | 29.84 | humidity | 50.0 | 270 | > th | dose independent | rect. | 10 | 14 |
| 249 | 29.88 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 21 | 3 |
| 282 | 29.93 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 14 | 14 |
| 342 | 30.08 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 24 | 12 |
| 348 | 30.09 | temperature | 25.0 | 270 | < th | dose independent | rect. | 17 | 8 |
| 354 | 30.11 | humidity | 90.0 | 270 | < th | dose independent | rect. | 15 | 4 |
| 394 | 30.18 | radiation | 1.0 | 720 | > th | dose dependent | rect. | 17 | 2 |
| 415 | 30.20 | radiation | 40.0 | 270 | < th | dose independent | rect. | 24 | 11 |
| 421 | 30.22 | radiation | 40.0 | 270 | < th | dose independent | rect. | 24 | 19 |
| 462 | 30.28 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 1 |
| 503 | 30.34 | radiation | 1.0 | 720 | > th | dose independent | rect. | 17 | 2 |
| 518 | 30.35 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 14 |
| 525 | 30.35 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 14 |
| 528 | 30.36 | radiation | 30.0 | 90 | < th | dose independent | rect. | 2 | 20 |
| 605 | 30.47 | radiation | 20.0 | 270 | < th | dose independent | rect. | 24 | 11 |
| 649 | 30.53 | temperature | 25.0 | 720 | < th | dose independent | rect. | 17 | 2 |
| 686 | 30.55 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 2 | 21 |
| 688 | 30.56 | radiation | 1.0 | 270 | > th | dose independent | rect. | 15 | 4 |
| 714 | 30.58 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 15 | 5 |
| 762 | 30.64 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 22 |
| 802 | 30.68 | wind | 7.0 | 270 | < th | dose independent | rect. | 15 | 4 |
| 805 | 30.68 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 15 | 6 |
| 834 | 30.72 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 4 |
| 842 | 30.72 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 4 |
| 859 | 30.73 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 18 |
| 884 | 30.75 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 4 | 19 |
| 910 | 30.77 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 11 | 9 |
| 923 | 30.78 | humidity | 50.0 | 720 | < th | dose independent | rect. | 16 | 2 |
| 937 | 30.78 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 15 | 14 |
| 966 | 30.81 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 15 | 4 |
| 968 | 30.81 | wind | 1.0 | 270 | > th | dose independent | rect. | 15 | 14 |
| 969 | 30.81 | humidity | 50.0 | 720 | < th | dose dependent | rect. | 16 | 2 |
| 1000 | 30.82 | temperature | 30.0 | 720 | < th | dose independent | rect. | 12 | 19 |