Os02g0456100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os02g0456100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 111.93 | 0.497 | 2.8 | 0.269 | 0.107 | -0.698 | 0.465 | -2.45 | 0.0139 | 15.6 | 4.9 | 1448 | -- | -- |
| 114.46 | 0.498 | 2.75 | 0.232 | 0.0929 | -0.453 | 0.452 | -- | 0.0584 | 15.8 | 4.401 | 2947 | -- | -- |
| 112.55 | 0.494 | 2.8 | 0.278 | 0.11 | -0.702 | -- | -2.35 | 0.0159 | 14.9 | 4.9 | 1448 | -- | -- |
| 114.82 | 0.499 | 2.76 | 0.223 | 0.094 | -0.47 | -- | -- | 0.0628 | 15.1 | 4.4 | 2947 | -- | -- |
| 112.93 | 0.495 | 2.8 | 0.271 | -- | -0.729 | -- | -2.48 | 0.013 | -- | 4.795 | 1650 | -- | -- |
| 116.8 | 0.507 | 2.76 | 0.101 | 0.0877 | -- | 0.452 | -- | 0.0498 | 16.3 | -- | -- | -- | -- |
| 117.36 | 0.507 | 2.76 | 0.105 | 0.0906 | -- | -- | -- | 0.0523 | 15.6 | -- | -- | -- | -- |
| 115.23 | 0.5 | 2.76 | 0.225 | -- | -0.481 | -- | -- | 0.057 | -- | 4.434 | 3100 | -- | -- |
| 115.96 | 0.502 | 2.76 | -- | 0.0865 | -0.36 | -- | -- | 0.0379 | 15.1 | 4.5 | 2947 | -- | -- |
| 117.81 | 0.507 | 2.76 | 0.102 | -- | -- | -- | -- | 0.0499 | -- | -- | -- | -- | -- |
| 117.65 | 0.507 | 2.76 | -- | 0.0885 | -- | -- | -- | 0.0406 | 15.7 | -- | -- | -- | -- |
| 116.37 | 0.502 | 2.76 | -- | -- | -0.365 | -- | -- | 0.0324 | -- | 4.462 | 3072 | -- | -- |
| 118.08 | 0.507 | 2.76 | -- | -- | -- | -- | -- | 0.0386 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 97.57 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 7 | 14 |
| 3 | 97.64 | temperature | 20.0 | 90 | < th | dose independent | rect. | 6 | 14 |
| 22 | 103.73 | wind | 5.0 | 10 | > th | dose dependent | rect. | 15 | 6 |
| 23 | 103.79 | wind | 7.0 | 10 | < th | dose independent | sin | 13 | NA |
| 30 | 104.13 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 3 | 1 |
| 34 | 104.13 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 3 | 1 |
| 41 | 104.26 | wind | 1.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 43 | 104.26 | wind | 1.0 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 50 | 104.83 | wind | 5.0 | 10 | > th | dose dependent | rect. | 15 | 18 |
| 104 | 106.37 | wind | 5.0 | 10 | > th | dose dependent | sin | 15 | NA |
| 106 | 106.40 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 115 | 106.50 | atmosphere | 1005.0 | 30 | < th | dose independent | rect. | 2 | 3 |
| 116 | 106.51 | atmosphere | 1005.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 117 | 106.51 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 3 | 1 |
| 129 | 106.58 | wind | 7.0 | 10 | > th | dose independent | rect. | 19 | 3 |
| 135 | 106.59 | wind | 7.0 | 10 | > th | dose independent | rect. | 19 | 1 |
| 138 | 106.59 | wind | 7.0 | 10 | > th | dose dependent | rect. | 19 | 1 |
| 145 | 106.60 | temperature | 20.0 | 90 | < th | dose independent | rect. | 18 | 1 |
| 152 | 106.60 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 18 | 1 |
| 167 | 106.64 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 15 | 5 |
| 207 | 106.83 | temperature | 20.0 | 30 | < th | dose independent | sin | 22 | NA |
| 220 | 106.92 | temperature | 20.0 | 10 | < th | dose independent | rect. | 7 | 5 |
| 223 | 106.92 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 7 | 5 |
| 229 | 106.93 | temperature | 20.0 | 90 | < th | dose independent | rect. | 7 | 5 |
| 246 | 106.95 | temperature | 20.0 | 10 | < th | dose independent | rect. | 8 | 2 |
| 257 | 106.95 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 8 | 2 |
| 276 | 106.97 | temperature | 20.0 | 30 | > th | dose independent | sin | 22 | NA |
| 287 | 106.98 | wind | 5.0 | 10 | > th | dose independent | rect. | 8 | 1 |
| 293 | 106.98 | wind | 5.0 | 10 | > th | dose dependent | rect. | 8 | 1 |
| 323 | 107.05 | wind | 7.0 | 10 | > th | dose independent | rect. | 15 | 5 |
| 379 | 107.26 | wind | 7.0 | 10 | > th | dose independent | sin | 13 | NA |
| 409 | 107.37 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 3 | 1 |
| 449 | 107.59 | wind | 3.0 | 90 | > th | dose dependent | rect. | 6 | 1 |
| 483 | 107.85 | wind | 5.0 | 10 | > th | dose dependent | rect. | 15 | 2 |
| 549 | 108.11 | wind | 7.0 | 10 | > th | dose independent | rect. | 15 | 2 |
| 573 | 108.22 | wind | 3.0 | 90 | > th | dose independent | rect. | 6 | 1 |
| 584 | 108.37 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 6 | 1 |
| 626 | 108.74 | radiation | 10.0 | 10 | < th | dose independent | rect. | 8 | 1 |
| 647 | 108.95 | wind | 5.0 | 90 | > th | dose dependent | rect. | 18 | 3 |
| 653 | 108.98 | wind | 1.0 | 10 | < th | dose independent | rect. | 3 | 6 |
| 685 | 109.18 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 768 | 109.42 | wind | 5.0 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 775 | 109.44 | wind | 5.0 | 270 | > th | dose dependent | rect. | 12 | 9 |
| 780 | 109.46 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 793 | 109.53 | wind | 5.0 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 810 | 109.63 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 6 | 1 |
| 823 | 109.69 | wind | 1.0 | 10 | < th | dose dependent | rect. | 3 | 6 |
| 826 | 109.70 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 15 | 2 |
| 848 | 109.76 | humidity | 90.0 | 90 | > th | dose independent | rect. | 2 | 2 |
| 872 | 109.89 | wind | 5.0 | 10 | < th | dose independent | rect. | 8 | 23 |
| 876 | 109.90 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 905 | 110.00 | wind | 7.0 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 912 | 110.03 | wind | 3.0 | 10 | > th | dose dependent | rect. | 2 | 7 |
| 952 | 110.14 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 995 | 110.30 | humidity | 80.0 | 90 | < th | dose independent | rect. | 6 | 1 |
| 997 | 110.31 | wind | 3.0 | 1440 | > th | dose dependent | rect. | 12 | 1 |