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Os02g0453300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10 (0.0127) R2 : 0.00221
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0268 (0.0267) R2dN8 : 0.00285 R2N8 : 0.00221
σ : 0.239
deviance : 26.12
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
12.98 0.169 10.4 1.15 0.4 29.2 0.0742 59.2 0.0801 23.8 14.99 4424 -- --
13.69 0.174 10 0.208 0.392 0.852 0.123 -- 0.054 23.8 15.95 5508 -- --
13 0.168 10.4 1.14 0.4 29.2 -- 59.3 0.079 23.8 14.97 4422 -- --
12.83 0.167 10 0.319 0.397 0.712 -- -- 0.0786 23.7 15.57 7006 -- --
22.91 0.223 10.5 1.23 -- 30 -- 61 0.0844 -- 15.05 4742 -- --
15.41 0.184 10 0.153 0.399 -- 0.0759 -- 0.0401 23.8 -- -- -- --
15.43 0.184 10 0.15 0.399 -- -- -- 0.0398 23.8 -- -- -- --
23.14 0.224 10 0.331 -- 0.635 -- -- 0.0896 -- 15.84 7272 -- --
14.66 0.178 10 -- 0.405 0.548 -- -- 0.0346 23.8 14.83 6238 -- --
25.43 0.236 10 0.162 -- -- -- -- 0.0447 -- -- -- -- --
16.03 0.187 10 -- 0.4 -- -- -- 0.0231 23.8 -- -- -- --
24.61 0.232 10 -- -- 0.795 -- -- 0.0337 -- 15.84 7272 -- --
26.12 0.239 10 -- -- -- -- -- 0.0268 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 12.63 humidity 50 43200 < th dose independent rect. 16 16
5 12.65 humidity 50 43200 > th dose independent rect. 16 16
9 12.67 humidity 50 43200 < th dose independent rect. 17 4
32 12.71 humidity 50 43200 > th dose independent rect. 17 3
36 12.71 radiation 30 4320 < th dose independent rect. 18 13
37 12.71 humidity 70 14400 > th dose dependent rect. 1 6
38 12.71 humidity 60 43200 < th dose dependent rect. 17 14
49 12.72 humidity 50 14400 > th dose dependent rect. 1 6
58 12.73 humidity 80 14400 > th dose dependent rect. 3 4
64 12.74 temperature 15 4320 < th dose dependent rect. 1 1
66 12.75 humidity 60 43200 < th dose dependent rect. 17 7
69 12.76 humidity 60 43200 < th dose dependent rect. 17 4
81 12.78 humidity 70 43200 < th dose independent rect. 19 11
84 12.78 humidity 50 14400 < th dose dependent rect. 12 1
105 12.82 humidity 70 43200 < th dose independent rect. 19 6
111 12.82 humidity 70 43200 < th dose dependent rect. 19 1
115 12.82 atmosphere 1015 4320 > th dose dependent rect. 11 10
116 12.82 humidity 80 43200 < th dose dependent rect. 19 12
124 12.84 atmosphere 1015 4320 < th dose independent rect. 13 7
125 12.84 atmosphere 1015 4320 > th dose independent rect. 12 8
132 12.84 temperature 25 90 < th dose dependent rect. 5 20
152 12.86 humidity 70 43200 > th dose independent rect. 19 12
163 12.86 temperature 20 720 < th dose dependent rect. 4 20
175 12.87 humidity 50 14400 > th dose dependent rect. 5 1
198 12.88 temperature 15 4320 < th dose dependent rect. 23 17
212 12.89 temperature 15 4320 < th dose dependent rect. 23 15
224 12.90 humidity 80 43200 < th dose dependent rect. 20 4
251 12.91 temperature 15 4320 < th dose dependent rect. 23 12
258 12.91 temperature 20 720 < th dose dependent rect. 4 17
271 12.92 atmosphere 1015 4320 < th dose independent rect. 19 1
285 12.92 temperature 15 4320 < th dose dependent sin 8 NA
318 12.93 atmosphere 1015 4320 < th dose independent rect. 16 4
319 12.93 radiation 20 4320 < th dose independent rect. 2 4
326 12.93 temperature 20 720 < th dose dependent sin 23 NA
327 12.93 humidity 80 43200 < th dose dependent sin 9 NA
348 12.93 humidity 50 43200 < th dose dependent rect. 19 12
353 12.93 temperature 20 720 < th dose dependent rect. 5 15
370 12.94 humidity 60 43200 < th dose dependent sin 12 NA
371 12.94 humidity 80 43200 < th dose dependent rect. 21 1
408 12.95 humidity 80 43200 < th dose dependent rect. 4 3
441 12.96 temperature 15 4320 < th dose independent rect. 3 1
442 12.96 humidity 60 43200 > th dose independent rect. 3 4
494 12.98 humidity 50 43200 < th dose independent rect. 20 1
507 12.98 temperature 15 4320 < th dose dependent sin 2 NA
543 12.99 humidity 60 43200 < th dose independent rect. 22 1
545 12.99 atmosphere 1015 4320 > th dose independent rect. 13 2
589 12.99 humidity 70 43200 < th dose dependent rect. 18 19
607 13.00 temperature 15 4320 < th dose dependent no NA NA
608 13.00 humidity 60 43200 < th dose dependent rect. 22 1
645 13.00 temperature 15 4320 < th dose dependent rect. 10 21
666 13.01 humidity 50 43200 > th dose independent rect. 6 1
667 13.01 humidity 50 43200 > th dose independent rect. 19 1
670 13.01 humidity 90 14400 < th dose independent rect. 4 3
671 13.01 humidity 60 43200 < th dose independent rect. 4 3
672 13.01 wind 1 43200 > th dose independent rect. 9 4
688 13.01 temperature 20 1440 < th dose dependent rect. 5 10
719 13.02 humidity 60 43200 > th dose independent rect. 22 1
728 13.02 temperature 15 1440 > th dose independent rect. 18 13
734 13.02 humidity 50 43200 > th dose dependent rect. 22 2
735 13.02 humidity 50 43200 < th dose dependent rect. 20 2
764 13.03 humidity 50 43200 < th dose independent sin 11 NA
765 13.03 humidity 50 14400 < th dose independent rect. 12 1
782 13.03 temperature 20 1440 < th dose dependent rect. 10 1
812 13.03 temperature 20 1440 < th dose dependent rect. 8 18
827 13.04 temperature 15 4320 > th dose independent rect. 3 1
831 13.04 radiation 30 4320 < th dose independent rect. 6 1
835 13.04 temperature 15 14400 < th dose independent rect. 7 3
854 13.04 humidity 70 43200 < th dose independent rect. 19 16
865 13.04 humidity 90 14400 > th dose dependent rect. 9 2
876 13.04 humidity 50 43200 < th dose dependent rect. 5 4
926 13.05 radiation 10 4320 > th dose independent rect. 5 1
935 13.05 wind 1 43200 < th dose independent rect. 10 3
971 13.05 radiation 10 4320 > th dose dependent rect. 5 1