Os02g0452700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0452700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 103.28 | 0.477 | 12 | -1.42 | 2.83 | 1.74 | 0.311 | -5.67 | -0.478 | 18.5 | 26.47 | 996 | -- | -- |
| 109.65 | 0.488 | 11.9 | -0.431 | 2.8 | 1.22 | 0.00483 | -- | -0.273 | 18.5 | 26.33 | 924 | -- | -- |
| 103.37 | 0.474 | 12 | -1.45 | 2.81 | 1.79 | -- | -6.08 | -0.446 | 18.5 | 26.8 | 981 | -- | -- |
| 109.35 | 0.487 | 11.9 | -0.343 | 2.83 | 1.2 | -- | -- | -0.279 | 18.5 | 26.38 | 942 | -- | -- |
| 294.95 | 0.8 | 12 | -1.48 | -- | 3.64 | -- | -5.69 | -0.792 | -- | 24.73 | 507 | -- | -- |
| 148.68 | 0.572 | 11.9 | -0.0519 | 3.04 | -- | 0.188 | -- | -0.24 | 18.8 | -- | -- | -- | -- |
| 148.77 | 0.571 | 11.9 | -0.055 | 3.04 | -- | -- | -- | -0.239 | 18.8 | -- | -- | -- | -- |
| 315.64 | 0.827 | 11.9 | -0.722 | -- | 3.32 | -- | -- | -0.594 | -- | 24.5 | 520 | -- | -- |
| 112.26 | 0.493 | 11.9 | -- | 2.86 | 1.12 | -- | -- | -0.217 | 18.5 | 26.59 | 952 | -- | -- |
| 633.05 | 1.18 | 11.8 | -0.122 | -- | -- | -- | -- | -0.298 | -- | -- | -- | -- | -- |
| 148.85 | 0.571 | 11.9 | -- | 3.04 | -- | -- | -- | -0.233 | 18.8 | -- | -- | -- | -- |
| 328.95 | 0.845 | 11.9 | -- | -- | 3.2 | -- | -- | -0.506 | -- | 24.51 | 512 | -- | -- |
| 633.45 | 1.17 | 11.8 | -- | -- | -- | -- | -- | -0.284 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 92.38 | temperature | 20 | 270 | > th | dose dependent | rect. | 12 | 16 |
| 29 | 98.62 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 8 |
| 39 | 99.60 | temperature | 20 | 270 | > th | dose dependent | sin | 17 | NA |
| 40 | 99.64 | temperature | 20 | 90 | > th | dose dependent | sin | 15 | NA |
| 100 | 103.19 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 9 |
| 102 | 103.39 | humidity | 70 | 270 | > th | dose independent | rect. | 15 | 9 |
| 115 | 103.80 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 3 |
| 118 | 103.86 | radiation | 1 | 270 | < th | dose independent | rect. | 15 | 9 |
| 129 | 104.01 | temperature | 15 | 270 | > th | dose dependent | rect. | 11 | 9 |
| 132 | 104.06 | radiation | 1 | 270 | < th | dose independent | rect. | 5 | 19 |
| 156 | 104.58 | radiation | 1 | 270 | < th | dose dependent | rect. | 16 | 8 |
| 192 | 105.00 | humidity | 50 | 270 | > th | dose dependent | rect. | 16 | 8 |
| 227 | 105.26 | radiation | 1 | 270 | < th | dose dependent | rect. | 5 | 19 |
| 247 | 105.46 | temperature | 30 | 270 | < th | dose independent | rect. | 16 | 8 |
| 261 | 105.54 | temperature | 30 | 90 | < th | dose dependent | sin | 16 | NA |
| 278 | 105.68 | temperature | 30 | 270 | < th | dose dependent | sin | 18 | NA |
| 304 | 105.94 | radiation | 1 | 270 | < th | dose independent | rect. | 9 | 15 |
| 328 | 106.13 | temperature | 30 | 10 | < th | dose dependent | rect. | 14 | 12 |
| 382 | 106.73 | radiation | 1 | 270 | < th | dose dependent | rect. | 9 | 15 |
| 404 | 106.87 | temperature | 30 | 10 | < th | dose dependent | rect. | 12 | 14 |
| 499 | 107.59 | humidity | 50 | 270 | > th | dose dependent | rect. | 5 | 19 |
| 500 | 107.60 | radiation | 30 | 1440 | < th | dose dependent | rect. | 18 | 7 |
| 535 | 107.85 | radiation | 1 | 720 | > th | dose dependent | rect. | 17 | 13 |
| 586 | 108.16 | temperature | 25 | 720 | > th | dose dependent | no | NA | NA |
| 797 | 109.63 | temperature | 25 | 270 | > th | dose independent | rect. | 12 | 8 |
| 806 | 109.69 | radiation | 30 | 14400 | > th | dose independent | rect. | 16 | 16 |
| 823 | 109.83 | humidity | 90 | 270 | < th | dose independent | rect. | 11 | 8 |
| 861 | 110.04 | humidity | 50 | 270 | > th | dose independent | rect. | 5 | 19 |
| 862 | 110.05 | radiation | 30 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 882 | 110.11 | radiation | 1 | 270 | < th | dose dependent | sin | 19 | NA |
| 891 | 110.19 | radiation | 10 | 1440 | < th | dose independent | rect. | 17 | 14 |
| 951 | 110.55 | radiation | 1 | 270 | > th | dose independent | sin | 18 | NA |
| 957 | 110.59 | radiation | 1 | 270 | < th | dose independent | sin | 18 | NA |
| 964 | 110.62 | wind | 3 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 980 | 110.69 | wind | 3 | 43200 | < th | dose independent | rect. | 3 | 10 |